Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <----------                                                                                        <---------AHL20(2)                                <---------ICU4                                         --------->AHL20(2)                               <---------YAB1                                          <---------AHL20(2)                             --------->YAB1                                   <------ZmHOX2a(1)                        ----------->GT1                                 --------->MYB111(1)  --------                       --------->DAG2                                  <--------P----------->GT1 ------->GT1         ---------->DOF2                               <---------ANAC46    <---------AHL20(1) --->DOF2        ----------->RAV1(1)              <---------MYB46(3)<---------ZAT6  --------->YAB1   gggaaatagttgtgagggacaacaaaaggtttcatcatttcaagaatggggtttgttcttgtggagattactggtaagtaggactgtaataaaattggtg  6366100                                           <---------ANAC46                                           <---------ANAC58                  --------->TOE2(3)-------                                           <---------ANAC58             ------------>CBF  --------->YAB1   --------->At4g35610                 <---------ZAT14                 --------->TOE2(3) <---------YAB1 --CBF<-------TEIL                     <------------CBF               --------->YAB1----------->GT1 --->GT1   --------->YAB1              --------->ZAT14   <-----------RAV1(2) --------->YAB1   -------   aaaacagatgcattagtaatagtagctcttagtaaattcagtattgtgtgtatttatgttcaggcgagacaaacatcaatgttaatatgttataataagc  6366200                     ------------>CBF                    --------->ANAC58                    --------->ANAC55(2)                  <-----------GT1               <---------REM1(1)             <-------GAMYB      <---------ANAC46      <---------ANAC58                      --------->MYB52(1)      <---------ANAC58    --------->AHL20(2)------>MYB46(1)                  ------------>CBF <-----------RAV1(1)--------->ANAC58        ------>MYB83                    <-----------GT1 -->ANAC58  --------->MYB52(2)            <---------MYB59               <---------DAG2 -->ANAC58  <---------MYB46(3)         <-----------GT1<-----------GT1   <----------DOF2   tatttgttgtgtgtttgttgtaacgcaattacatagattataaaccaaactgatatataccaagtgaaactgaacttttttcaatgcgaaacaagtttta  6366300                                                                                       <---------ATHB12                                                                                   ------------>CBF                                                                                  --------->ANAC58                                                                                  --------->ANAC58               <---------ZAT18                                                    --------->ANAC46         <-----------HVH21                                                 --------->ANAC58         -     <------------CBF     ----------->TBP                                  --------->ANAC58        <-    --------->ATHB12------>ZmHOX2a(1)       <---------GLK1(2)       <------ZmHOX2a(1)  --------->ICU4   aatctctcattggtcagtgctcctcactatatataacgtctatccacattctctaacttctcaaaaaacaggaagagaagcaagacgcaatgaagagttc  6366400      <---------ICU4                                    ------->TEIL                     -------->P -      --------->ATHB12                             <---------ANAC58          ---------->DOF2 <-------     <---------YAB1                                <---------ANAC58--------->HSFC1(2)    --------->MYB52(1) -------->YAB1                   <-----------GT1   <---------ANAC46<---------HSFC1(2)  --------->MYB46(3) --------ATHB12         <-----------GT1    <---------At4g35610  <------ZmHOX2a(1)    --------->TOE2(3)   aatgagcatcattgtcttcttgtttgtgaccatcttcaccatctctgcttcttccttgaaccctgaggaaacttgcatacaaagaaacatcaaccggtca  6366500                                                                                  <---------MYB52(1)                                                                                  <------NtERF2                                                                                 <---------RAP2.6(3)                                                                                 ------>NtERF2                                                                                 <-----------HVH21                                                                                 <-----------TGA1                                                                                --------->bZIP60(1)                                                                                <---------bZIP60(1)                                                                                <---------ANAC46                                                                                --------->RAP2.3(3)                                                                            <-------MYC2                                                                            <-------MYC3                         --------->ANAC58                                  <---------ANAC58                         --------->ANAC58                                  <---------ANAC58                         --------->ANAC46                                <---------ANAC46             *TSS     --------->TOE1(2)                                  <---------ANAC58            <---------ZAT14                       --------->ZAT18        <---------ANAC58        <---------ARR11(3)                   <---------ANAC46--------->ZAT14------->PIF5        --------->ARR11(3)                   <---------ANAC58<---------ZAT14------->MYC2 ------->GAMYB       --------->ANAC58        <---------ANAC58--------->ZAT18------->MYC3 -------->MYB46(3)   --------->ANAC58     <----------DOF2   <---------ANAC46<-------PIF5          <-- ----HVH21  --------->ZAT14     ---------->DOF2   <---------ZAT18   <---------O2--------->ATERF1(2) <   caacctccaagctcttcactcgaacccaagacatcaaagttcgactttcttgtggacaagttgtgcagagacatggctcgtgccgtcatgttctctgtga  6366600          --------->KAN4(2)         <---------HSFB2a(1)         --------->HSFC1(2)         <---------HSFC1(2)         --------->HSFB2a(1)     ----------->GT1     --------->LBD16                                                                             <---   <---------LBD16                                                                               <---  --------->MYB52(1)                                                                           <----- <---------ARR14(2)                                              ---------->DOF2             <------- ----ZmHOX2a(1)                     <---------ANAC46   ----------->HVH21          <---------ANAC46 ---------GLK1(1)          ----------->HVH21           ----------->TGA1---------->DOF2       --------   ggataaccggaaaattcccatctcactatgtgaaggcgatgtgtaatgtgtttggaaatgacgagaagaaagtgaaagagtatgttgtgaagaaatggtt  6366700    <-------TEIL <---------MYB46(3) <---------HSFB2a(1) <---------HSFC1(2) --------->HSFB2a(1) <------MYB83 <------MYB46(1) --------->HSFC1(2) ---MYB46(1)                                  ----------->GT1 ---MYB83                            --------->ATHB12                                     <---------TOE1(3) ---P                               <---------YAB1             <---------ZAT6             <---------TOE2(3) --MYB46(3)                      <----------DOF2  <---------YAB1                      --------->At4g35610 ->ATHB12<---------ZAT2 --------->ARR11(3)---------->DOF2 <----------DOF2     <-----------GT1   gggaggttcgaagctcgtgtctagtttatcttgtgcttttcattgaaagagtataattgtctttagtgatattagtctattaacaattagctaaggtttt  6366800                               --------->ANAC46                               --------->ANAC58               --------->ARR11(3)               <---------GLK1(2)       --------->ICU4           ---------->DOF2     <----------ID1         <---------YAB1                       --------->AtLEC2   ---------->DOF2             --------->ANAC58    <---------ATHB51               <------------MYB.PH3(1)  --------->LBD16          <---------AHL20(2)      --------->ICU4               <-----------GT1     < --------->ANAC46         --------->AHL20(2)---------->DOF2 ---------->DOF2     --------->MYB52(1) --   catccgaaagtcaaaaagattatgcaaattaaaacgacacaattagtaaagaaattatgctcaaaagtcaaaaacttacaaataacagtttttatgcaaa  6366900                                         --------->YAB1                                        <---------YAB1                                    --------->ARR14(2)                                     --------->ARR11(3)                                   --------->GLK1(2)                                     --------->AHL20(1)                                   <---------ARR11(1)                                     <---------ARR11(3)                                   <---------ARR14(2)                                     <---------AHL20(1)                                <---------MYB59            <---------AHL20(2)    --------->AHL20(2)                         <---------DAG2 -----------GT1<---------YAB1   --------->AHL20(2) ----------->GT1           <----------DOF2 ------->AHL20(2)              --------->YAB1   --------->GLK1(2)        <-----------GT1 <---------ARR14(1)   attaacttcagaaatttatgaatagcaattccataaaaatatatcataagaatgtgtaaaaaatcagagatttattctcctttttgctaccgaatccatt  6367000  Previous    Next  AGI:  At1g18485.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G57430.1); similar to Putative Putative Pentatricopeptide (PPR) repeat-containing protein [Brassica oleracea] (GB:AAW81739.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67948.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 6363165    to: 6366228    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g18486.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02655.1) Range:  from: 6366390    to: 6366746    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g18490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39890.1); similar to Putative Expressed protein [Brassica oleracea] (GB:AAW81740.1); contains InterPro domain Protein of unknown function DUF1637 (InterPro:IPR012864) Range:  from: 6366513    to: 6368842    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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