Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------ICU4  --------->GLK1(2)          <---------YAB1                           <------ZmHOX2a(1)  --------->ICU4           <---------AtLEC2                     --------->YAB1 ----ANAC58          <---------DAG2                         ---------->ID1                         -- ----ANAC58          <----------DOF2           <----------DOF2 <---------YAB1 ------->TEIL     <----- ---MYB46(3)      ------>ZmHOX2a(1) ------->TEIL   <----------DOF2--------->ICU4               <-----   tgcaattctgacacaacttcctcctttttgtatgaatgaatcttgttttctttcttttttttgttgtcataaggagaatgaatcttgttttcttatttct  6361200                           --------->At5g28300                          ----------->GT1                          <---------ZAT6                   <---------At4g35610     ----------->GT1  <---------ZAT14                      <---------ZAT2 <----------DOF2      --------->ZAT18                      --------->ZAT2  ---------->DOF2         -- -------->ID1         --------->ZAT14                      --------->At4g35610               <------- ----ANAC58         <---------------AtSPL8 <---------AHL20(2) --------->ANAC58              --------- ----ANAC58         <---------------AtSPL3--------->AHL20(2)  --------->ANAC58           --------->MYB52(1)   tgtcttttagtaaaaaactatttgtgtactgtaactcttgtatataaaatagacataagacagctcgcaaattgtagtaaagggacttcaataccggtca  6361300                                ------>ZmHOX2a(2)               --------->At4g35610                               <------ZmHOX2a(2)                <---------At4g35610                              <-----------ARR10              --------->ZAT2      <------MYB46(1)         <---------AGP1                 --------->At4g35610      <---------MYB46(3)      <---------ARR14(3)             <---------ZAT2      <------MYB83            <---------ARR14(2)             <---------At4g35610     <---------TOE2(2)        --------->ARR14(2)            <-----------RAV1(1)     <---------TOE1(2)        <---------ARR11(3)        --------->At4g35610    <---------MYB52(1)        --------->ARR11(3)        <---------ZAT2  --------->ATHB12            --------->ARR14(3)        <---------ZAT14 ------->YAB1        <---------ZAT2                     <---------At4g35610 ----HVH21           --------->ZAT2                   <---------DEAR3(1) >ANAC46         <---------MYB52(2)                  <---------At4g35610                 <---------At4g35610   ctcatcgttggtttatacaactaagcttggaagatctcgtctggtctcaactctgggctgctctgctgctcagagtccaatactctggttcaactcattt  6361400                                                                   <------ZmHOX2a(2)                                                                   --------->CCA1(2)                                                                  <---------ARR11(3)                <                                                                 <---------GLK1(1)                 --                                                    --------->ATERF1(1)                           <--                                                    <------NtERF2--------->GLK1(1)                <--                                                    --------->ALFIN1         <---------ALFIN1     ---                                                   <---------ATERF1(1)---------->DOF2             ---                                                  <---------ANAC58--------->ARR14(2)        <--------                                                  <---------ANAC58--------->ARR11(3)        ---------                                                  <---------ANAC46<---------ARR14(2)        <--------                                                  --------->ALFIN1--------->AGP1         --------->ARR11(3)                   <---------MYB59  ----------->RAV1(1)        <------ZmHOX2a(1)         <---------ARR11(3)   ccaactatctgggttaatgggcctacttaattcatgagcaacaaaacaatgggcgtggccttgtaggagatccaaagcccaacttgaacaatatctagaa  6361500                                                                         <---------------AGL15                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                             --------->AHL20(1)                                                             <---------AHL20(2)                                                          <---------AHL20(2)                                                     --------->AHL20(2)  --------------->AGL15 -------TEIL                                        <---------ATHB12    <-----------------AG ------->CCA1(2)                                 <---------WRKY38(1)    <-----------------AGL1 -------ARR11(3)                       <------------CBF   --------->AHL20(2) -------ARR14(2)                      --------->ATHB12   --------->AHL20(2) ------>ARR14(2)                    <---------MYB52(1)   <---------AHL20(2)      <------ZmHOX2a(1) ------>ARR11(3)                  <---------ANAC46--------->WOX13(1)    <-----------------AGL3 -HSFB2a(2)                <---------WOX13(1)   ------------>CBF   <-----------GT1        ---------->DOF2 >HSFB2a(2)               <------------CBF  <---------ANAC58 <---------AHL20(1) ----------->GT1   <-- -HSFC1(1)---------->DOF2--------->ATHB12   <---------ANAC58 --------->AHL20(2)<---------TOE2(3)<----   gatacacagacaaaaagagtcactcactaattggcttcgtttattggctagtcaatgaattaatttaataaactgcttaataaggaaacttataaaggcg  6361600                       --------->LBD16                      <---------ANAC55(2)                      --------->ANAC46                      --------->ANAC58                      --------->ANAC58                      --------->ANAC55(2)                      --------->ANAC55(1)                      *TSS                     <---------LBD16            <------NtERF2           <------NtERF2           ------>NtERF2--------->At5g28300           <---------RAP2.6(3)                                ---------->DOF2          <---------ATERF1(2)                           --------->At4g35610          --------->ANAC58                             <---------ARR14(2)          --------->ANAC46                             --------->ARR14(2)          --------->ATERF1(2)                    --------->MYB52(1)          --------->DEAR3(1)      --------->AtLEC2     --------->GLK1(2)          --------->RAP2.6(2)     --------->ANAC58    <---------GLK1(2)                         <----          --------->ANAC58        --------->ANAC58    --------->ARR14(2)                     <------- ----------CBF   --------->YAB1  --------->WOX13(1)   <---------ARR14(2)        <---------CCA1(2)  <- ---TEIL <---------RAP2.6(2)  <-----------HVH21 <---------STY1(1)          <---------ZAT2    --------   cattgttcttggccgccatttatcacggaaaatgtcaagcagagaaaaccctagcggaatctgcaaaagcattcccaagctcatctcttccttcgtcgac  6361700                                              <---------ZAT2                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                               ------>ZmHOX2a(1)--------->ZAT18                               =================HOX2a_HOX2a                               ==================HOX2a_HOX2a                             ----------->RAV1(2)<---------ZAT18                         <---------At4g35610  --------->At4g35610                         <---------HSFB2a(1)  <---------At4g35610                         --------->At4g35610  --------->ZAT2                           <------NtERF2                     ------>NtERF2      <---------ARR14(2)                            --------->LBD16    <---------MYB52(1)   --------->HSFB2a(1)------>ZmHOX2a(1)                 --------->HSFB2a(2)   <-------GAMYB     --------->LBD16    --------->ARR14(2)                    <---------HSFB2a(2)  <---------ANAC46  --------->ANAC46    <---------ARR11(3)   <---------ARR14(2)     <---------LBD16 -----ALFIN1       <---------LBD16      --------->ARR11(3)   --------->ARR14(2)   --------->GLK1(2) --ETT(2)        <---------ARR14(2)     --------->ARR14(3)   --------->GLK1(2)<---------HSFC1(1) ---------DOF2   --------->ARR14(2)     <---------ARR14(3)  <---------GLK1(2) --------->HSFC1(1) ->ETT(2)      <-----------HVH21      ----------->ARR10   ----------->ARR10 <-------TEIL   actttcgttgattactccgtctccggcatcttcctgccccaagatcctagctcacaaaatgagattctgcaaacgaggttcgagaagccggagcgactcg  6361800                          --------->HSFB2a(2)                          <---------HSFB2a(2)                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                          --------->ATHB12                     --------->ARR11(3)                        <---------WOX13(1)                     <---------ARR14(2)             ------>ZmHOX2a(2)              <---------AtLEC2                     <------ZmHOX2a(2)     <---------SPL7      <-------           ------>ZmHOX2a(2)                      <---------ARR11(3)     ----------->HVH21  <------ZmHOX2a(2)          --------->GLK1(1)                       --------->ARR11(3)  <-----------HVH21  <---------MYB46(3)         --------->ARR11(3)             --------->ANAC58     --------->ATHB12        --------->ALFIN1         <---------ARR11(3)             --------->ANAC58    <---------YAB1    --------->At4g35610   <   ttgcaatcggtgatctccatggcgatctcgagaagtctagagaagcattcaagatcgctggtctgattgattcgtcggacagatggactggtggatcaac  6361900                   <---------SPL7                 --------------->AtSPL8                 <------NtERF2                 --------------->AtSPL3                ------>NtERF2               <---------DEAR3(1)               ----------->HVH21              --------->ATERF1(1)             <---------ATERF1(1)            <---------DEAR3(1)           --------->ALFIN1         --------->ZAT2         <---------ZAT2                              <---------DAG2       <-----------RAV1(2)                       <---------ARR11(3)   <---------MYB46(3)                            <---------ARR14(2)                          --------  <--------P<---------MYB46(3)                   --------->ARR14(2)                        <---------ZAT2 <-------GAMYB<---------PCF2            <------ZmHOX2a(1)                                  --------->ZAT2 --WRKY12<---------At4g35610     --------->ALFIN1--------->ARR11(3)                        --------->At4g35610 ---------MYB46(3)<---------ANAC46  <---------ANAC46 <----------DOF2                       <---------At4g35610   gatggttgttcaggtgggcgacgtactagatcgaggtggagaggagttgaagatactttatttcttagagaaattgaaacgagaggctgagagagctgga  6362000             <---------YAB1       <---------YAB1                        ----------->GT1                                    <----    --------->GLK1(2)                ------->TEIL          --------->ANAC55(2)             --------->CCA1(2)   --------->ARR11(3)          <------ZmHOX2a(2)           <---------ANAC55(2)            <---------ARR14(2)   <---------GLK1(2)          <---------ARR11(3)         --------->CCA1(2)                <---------GLK1(2) ----------->ARR10            --------->ARR11(3)       <<<<<<<<<RAP2.2                    --------->ARR14(2) ->ALFIN1  --------------->AGL15  <---------YAB1   <----------DOF2               <------ZmHOX2a(1) --   ggtaagattctgactatgaatgggaaccatgagatcatgaatatagaaggtgactttagatatgtgactaagaaaggtttagaggaatttcagatttggg  6362100  Previous    Next  AGI:  At1g18480.1    Description:  calcineurin-like phosphoesterase family protein. similar to calcineurin-like phosphoesterase family protein [Arabidopsis thaliana] (TAIR:AT1G07010.1); similar to Putative [Brassica oleracea] (GB:AAW81738.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843) Range:  from: 6361622    to: 6363000    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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