Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------DEAR3(2)                                                                                  ------>NtERF2                                                                                 <---------At1g77200                                                                                 <---------DEAR3(1)                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                               <-----------HVH21       <------NtERF2                                                           <---------SPL7      ------>NtERF2                                                            <---------ATERF1(1)     <---------ALFIN1                                                      <---------DEAR3(1)     --------->DEAR3(1)                                                 --------->DEAR3(1) ---HSFC1(2)                                                         <---------ALFIN1 -->HSFC1(2)                                                         --------->AtMYB61 ---HSFB2a(1)                                   --------->MYB52(1)  --------->MYB46(3) -->HSFB2a(1)                               ------>NtERF2           <---------MYB55(2) ---At4g35610            --------->ANAC46   --------->LBD16        -------->P<------NtERF2 -->At4g35610   ------>ZmHOX2a(1)         <---------LBD16       <---------At4g35610 ---ZAT2  <---------MYB52(1)            --------->ARR14(2)      --------->At4g35610<------NtERF2 -->ZAT2  --------->DOF5.7(2)           <---------ARR14(2)   ------>ZmHOX2a(1)<---------DEAR3(1)  <--   tccatcgccaccgttatcctccaaaacccgtctcattgccaatttccgcctaatggctacttcctcatctaccaccgtcgtcgtcggcgaagaaggggaa  6319000                                                                  <---------DDF1                                                                  ----------->RAV1(1)                                                                 --------->At1g77200                                                                 ----------->HVH21                                                                 ------->GAMYB                                                                 --------->DEAR3(1)                                                                 --------->DEAR4(1)                                                                 --------->DREB2C(2)                                                                --------->MYB46(3)                                                                --------->DEAR3(2)                                                             --------->MYB46(3)                                                            ------>NtERF2             <-------TEIL                               --------->ANAC58           --------->YAB1                               --------->ANAC58    --------->ARR11(3)      --------->MYB46(3)                     --------->TOE2(3)<---------ALFIN1------>ZmHOX2a(2)     --------->ANAC58              <---------YAB1    <---------ARR14(2)     <---------ARR11(3)     --------->ANAC58            --------->YAB1      --------->ARR14(2)   <---------YAB1 --------->ANAC46     ------>ZmHOX2a(1)   <-----------GT1   <---------ATERF1(1)               ------- -------ALFIN1  <---------At4g35610--------->ICU4--------->At4g35610    --------->YAB1     ----------   acaccgcaaccaatgttcatcttcctcttcttctgtgatgattttaacctcatcggaaacgcctccaccgacattgatgatcgtcgagtagctatgacac  6319100                                                                        <---------MYB52(1)                                                                      <---------HSFB2a(1)                                                                      --------->HSFB2a(1)                                                                      --------->HSFC1(2)  <------ZmHOX2a(2)                                                                <---------ICU4           <---------ARR11(3)                                      <---------LBD16           --------->YAB1           --------->ARR11(3)                           --------->LBD16                     --------->ICU4   <---------ANAC58 --------->YAB1          <---------LBD16--------->LBD16      --------->WOX13(1) <---------ANAC58 -->ZAT6               --------->ARR14(2)             <---------HSFB2a(2)    <---------MYB52(1)   --- ->HVH21 <---------ICU4<---------ARR14(2)             --------->HSFB2a(2)   <----------DOF2--------->YAB1   taatcggaacatcatttcgattttgaatccggtttagtaatctgggaaatgagcttctagtagcaattacgaccgttcctttacttgaacagatcataaa  6319200                                             <---------AtLEC2                      ----------->GT1                                           <---------YAB1                        <---------ZAT14                                   --------->HSFB2a(2)                           --------->ZAT14         ---------->DOF2         <---------At4g35610                         --------->HSFB2a(2) ------->DOF2                    --------->At4g35610     <----------ID1      <---------HSFB2a(2)   caaagagaattcaaagacgattttgtatcgccttcttctgaaattttgaatggccaaaaaaaacaaaatttggggtttttcagaacagagaaaaactcag  6319300                                            --------->ANAC58                   --------->ATHB12                            --------->GLK1(2)                                 --------->ICU4                           <---------ARR14(2)                  <-----------ARR10                           <---------GLK1(2)--------->ANAC58   <---------ARR11(3)                           --------->ARR14(2)                  --------->GLK1(2)                   <-            --------->AHL20(1)            --------->ZAT14      --------->ARR11(3)   <---------HSFB2a(2)            --------->AHL20(2)     --------->ANAC58     ----------->GT1    <------ZmHOX2a(1)   ------            <---------AHL20(2)     --------->ANAC58   ---------->DOF2    <---------TOE2(3)     ------ ---------->DOF2       --------->At4g35610---------->DOF2 ----------->GT1<---------TOE1(3)  ---------   aactaaagaagaaattttttggagaagcagaatcgacaagacagtgaagcaaattggaaagtgaaaatctttcttaaggaatgattcgagagaacaacat  6319400                                        --------->ZAT2                                        <---------At4g35610                                        --------->At4g35610                    *TSS            --------->MYB52(2)            --------->AHL20(1)    <--------P         --------->AHL20(2)      <-------GAMYB                                                      -         --------->YAB1     <-----------RAV1(1)                                                     <        <---------AHL20(2)  <---------MYB46(3)                                                      -    <---------AHL20(2)  <---------AHL20(2)          <---------AHL20(2)                              =    --------->AHL20(2) <---------AHL20(2)          <---------AHL20(2)          <------ZmHOX2a(1)    < --------TOE2(3)<---------YAB1  <------MYB46(1)    --------->AHL20(2)   <----------ID1         ------ --->TOE1(3)--------->ARR11(3)  <------MYB83   --------->ICU4         =============================== --->TOE2(3)<---------AHL20(1)  --------->MYB55(2) --------->YAB1     ---------->DOF2       --------- -->RAV1(1) <---------AHL20(2)  <---------MYB46(3)<---------YAB1 <---------------------WRI1 <--------   taacatttaaataatattttgattttttatttgttggttagtagctgagataattatatggttgtccagcgaaaaagacgaggagagtcttccaaatatg  6319500 ------->MYC3 <-------MYC3 -------->O2                --------->ANAC58 ---------O2                --------->ANAC46 -------->TGA1a             --------->ANAC58                                            ------>ZmHOX2a(1) ==================================bZIP_DOF                                          ---------->ID1 ---------TGA1a         --------->AHL20(2)                --------->At4g35610    <---------ANAC58 --->ANAC46             ---------->DOF2                <---------At4g35610       <---------ANAC58 =========bZIP_DOF     <---------ATHB12           <---------MYB46(3)            <---------ZAT2 >ARR14(2)         ------------>CBF           <----------DOF2                  --------->ANAC58 -ARR14(2)   <---------MYB52(1)               <---------DAG2                   --------->ANAC58     <   ccacgttggcacatcgttgtttccaataaaacgcagtgttttggacaacttttggttagcagttggacttgagggtttagcaagcttgtcctcacaaggt  6319600                                                                                           <---------                                                                                       <---------ZAT18                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                      <----------ID1<---------ANAC46                                                                     <------ZmHOX2a(1) <---------ZAT14                                                      --------->AHL20(2)            <---------bZIP60(2)           <---------ZAT18                            <---------AHL20(2)         --------->ALFIN1           --------->ZAT18                           --------->AHL20(2)         <---------HSFC1(2)  <   --------->GLK1(1)                        ---------->DOF2       <---------At4g35610--------------->AtSPL8 ---------TOE2(3)       --------->YAB1   ----------->GT1  --------->YAB1  ---------->DOF2------->TEIL   ttaagaaatctagaccactatattaaacataatcagacgagtctggtaaagcttatttaatcaaattcagaggagacaaagaagtgtcgtgtacttttac  6319700                                                           --------->HSFB2a(1)                                                       <---------MYB55(2)                                                       --------->MYB46(3)                                                       <---------ATHB12                                                      --------->ANAC58         --------->ANAC46                             --------->ANAC58         --------->ANAC58                             ------>MYB83 --------->YAB1                                       ------>MYB46(1) -DOF2   --------->ANAC58                             -------->P       <----------DOF2            --- ---------ATHB12                           --------->ARR11(3) >>>>>>>>>>>>>>>>>LFY --------->ZAT18<--   aaatcataaacacacaataagtcttcataggtgaagaagattagagatgttgtcccaaccaatgttccactgtcttttatctgaaggcactgcgaaattg  6319800                                                                                        --------->YAB1                                                                             ------->PIF5                                                                             ------->MYC4                                                                             ------->PIF4                                                                             ------->MYC2                                                                             <-------PIF5                                                                             <-------MYC3                                                                             <-------MYC4                                                                             <-------MYC2                                                                             ------->MYC3                                                                             <-------PIF4                                                                            --------->TGA1a                                     --------->GLK1(2)          <---------ALFIN1 <---------ANAC58                   <-----------RAV1(1)                         --------->ZAT14   <---------ANAC46           <----------DOF2       --------->ANAC46              <---------ZAT18   <---------ANAC58      --------->ARR11(3)     <-----------HVH21    --------->ANAC58          <---------TGA1a      <---------ARR11(3)    <----------DOF2       --------->ANAC58         ------------>OsbHLH66 ------>At4g35610  <---------REM1(1) --------->ARR14(2)        <---------ZAT14 ------->TEIL   <------ZmHOX2a(1) -------At4g35610 --------->ARR11(3)<---------GLK1(2)  <---------MYB52(2) <------------OsbHLH66 <----   agctcaaacatctctttagagatgttgccactttcacagaatccaactagcttcgcaactatctctgcactctcttgcacgtgccttgaatcataaggat  6319900  Previous    Next  AGI:  At1g18360.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G73480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68547.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 6316688    to: 6319420    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g18370.1    Description:  HIK (HINKEL); microtubule motor. similar to TES (TETRASPORE), microtubule motor [Arabidopsis thaliana] (TAIR:AT3G43210.1); similar to kinesin-like protein NACK1 [Nicotiana tabacum] (GB:BAB86283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68102.1); similar to hypothetical protein OsJ_001934 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12109.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) Range:  from: 6319643    to: 6323813    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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