Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------------->AGL15                                 ---------->DOF2                            <---------HSFB2a(2)                            <---------------AGL15                            --------------->AGL15                            --------->HSFB2a(2)                           ==================================MADS_MADS                           ==================================MADS_MADS          <----------DOF2  ----------------->AGL1         <---------ANAC58  ----------------->AGL2         <---------ANAC46  ----------------->AGL3      --------->GLK1(2)         <---------ANAC58  <-----------------AGL3      <-----------ARR10        <---------ICU4   <---------AHL20(2)      ----------------->AG       <---------GLK1(2)        <---------ATHB12  <---------AHL20(2)  --------->ARR11(3)     <---------------AGL15 <---------HSFB2a(2)  --------->AHL20(2)  <---------ARR11(3)    <-----------------AGL3 --------->HSFB2a(2)            ---   gaaattaaatggcttttacttcaagttcttccaaaaaaagaaactttcttcatatagaatctacttcttctataagcgtcaataactactcttaattcat  6307600                        --------->RAP2.6(2)                      <---------At4g35610                      --------->At4g35610                    ---------->CDC5               <-----------GT1            <--------HAHB4            -------->ATHB1            --------->YAB1            <---------ICU4                          <---------ANAC58            --------->ATHB51          --------->ARR11(3)           --------->ICU4------>NtERF2<---------ARR11(3)           <---------ATHB12          --------->CCA1(1)            --------->YAB1       ---------->DOF2           <---------ATHB51    --------->AHL20(2)   <---------ANAC58      --------->ANAC46  ---------         --------->WOX13(1)   --------->AHL20(2) <----------DOF2 <---------YAB1   ------>MYB46(1) ------>WOX13(1)  --------->TOE2(3)  --------->RVE1(1)         --------->YAB1     ------>MYB83    ---   caatctctagtcaattattacctcagcggccattaaaaaatatctgaaacgctttcttgctgcaactataattctcacaaaaccagcctgaaagcgaaca  6307700                                                     <-------MYC3                                                     ------->MYC3  <------ZmHOX2a(2)                             --------->GLK1(2)    <---------ALFIN1 --------->CCA1(2)                 <---------AHL20(2)              <------NtERF2    --------->ARR11(3)                 --------->AHL20(2)              --------->LBD16  --------->ARR14(2)           <---------At4g35610                   <---------At4g35610                               --         --------->DAG2  --------->ANAC46      --------->ZAT18    <---------ARR11(3)               -- >ZAT18 ---------->DOF2<-----------GT1         <---------ZAT18    <---------ARR14(2)       ---------- ------>MYB52(1)<---------WOX13(1)        --------->ZAT14         --------->AGP1     ---------->DOF2   aaacagagcataaagctgattaatttcaccgaatcagttttttgtatagtccgcacatgaagaaacaagatccaagagaaaacagggaaaagaaaaagaa  6307800                                                                   --------->HSFB2a(1)                                     --------->GLK1(1)             <---------HSFC1(2)                                     <---------GLK1(1)             <---------HSFB2a(1)                                    <---------ARR11(3)             --------->HSFC1(2)                               --------->DEAR3(1)                 <---------ARR11(3)                              --------->ANAC46                    --------->GLK1(2)                            <---------ALFIN1         ----------->GT1     <---------At4g35610         <---------GLK1(1) --------->ETT(2)        ---------->DOF2<-----------ARR10     --------->YAB1        --------->SPL7       <---------ZAT6    --------->ARR11(3)    <---------ATHB12       <---------ETT(2) --------->ZAT14       --------->ARR14(2)         <-------  --------->WOX13(1)     <-----------HVH21  <---------ZAT14       <---------ARR14(2)         -------- ------->TOE1(3) --------->ANAC58   --------->ARR11(3)           <---------GLK1(2)<----------DOF2  -- ------->TOE2(3) --------->ANAC58  --------->HSFB2a(1)   --------->AHL20(2) --------->At4g35610<----- >DOF2   --------->GLK1(1) --------->MYB46(3) ----------->GT1 --------->YAB1<---------At4g35610------   acctcaatcagaactctgcaagttatccgtccaccgaagatttctgaacagtgtaaagataaaataagaatcttcttctgcttccttttttttttctcga  6307900                                             --------->ANAC46                                             <---------ANAC55(2)                                             --------->ANAC58                                             --------->ANAC58                                             --------->ANAC55(2)          <---------ANAC58                  <-----------------AG          <---------ANAC58                  =========================================================          <---------ANAC46                  <-----------------AGL1 --HSFB2a(2)                     --------->HSFB2a(2) ->HSFB2a(2)                     <---------HSFB2a(2) <------ZmHOX2a(1)              <---------ZAT14 ------->GLK1(1)     ---------->DOF2       <-----------GT1                  <------ZmHOX2a(1)    <--- ----HSFB2a(2)    --------->ANAC58 <---------HSFB2a(2)                   <-----------RAV1(2)--------- --->HSFB2a(2)    --------->ANAC58 --------->HSFB2a(2)               <------ZmHOX2a(1)  ---------->DOF2   gaaatcaaattagcgtaaacaagaaaagacgatttctcgagaaaattacgaaataggaaacagtgagaagaggagacaggagagagtgaagaaagaaaga  6308000                                                                  <---------RVE1(1)                                                             <-------TEIL                                                           <---------GLK1(2)                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                          --------->At4g35610                                                      <-----------HVH21                                                      <-----------TGA1          <---------AHL20(2)                                                     <<<<<<<<<<AtbZIP1         --------->AHL20(2)   --------->HSFB2a(2)                               <---------bZIP60(1)    --------->ATHB51   <---------------AGL15                             --------->ANAC58       --------->AHL20(2)     --   <---------HSFB2a(2)                               --------->bZIP60(2)   --------->ICU4          <-   *TSS                                              --------->ANAC58      <---------YAB1     <------   --------------->AGL15                             --------->ANAC46    <--------HAHB4       <------  ----------------->AGL3                             --------->bZIP60(1) <---------ICU4       -------  ----------------->AGL2--------->AHL20(2)           <---------TGA1a     --------->YAB1       -------  <-----------------AGL3<---------AHL20(2)           --------->O2--------->ARR11(3)      --------->AtLEC2 ===================MADS_MADS     <---------AHL20(2) <---------O2<---------GLK1(2)<---------TOE2(3)<- ------------AtSPL8------------>CBF                  --------->TGA1a    <---------YAB1 <---------AtLEC2 ->DOF2         ----------->HVH21--------->AHL20(2)<---------ALFIN1    <-----------GT1<-------TEIL --   aggtactagaaatagcaagtgaccaattttttatattaaatagcagagatgtgccacgtcagattcagatttttatcattatttaatgttcatggaaatt  6308100                                                                               <----------CDC5                                                                            ------->MYC2                                                                            ------->MYC3                                                                            ------->PIF5                                                                            <-------MYC2                                                                            <-------MYC3                                  <---------ANAC46                          <-------PIF5                             <-----------RAV1(1)                           --------->ANAC58                           <---------ANAC58                                --------->ANAC58                           <---------ANAC58                                --------->ANAC46                         <---------ARR11(3)                              <---------ALFIN1                         --------->ARR11(3)                             --------->ANAC46 ------->HSFB2a(2)      --------->CCA1(1)                             --------->ANAC46 --------HSFC1(1)       <---------RVE1(1)                            --------->ZAT18 ---HSFC1(2)            <---------CCA1(1)                            <---------ZAT14             <--- ---HSFB2a(1)           --------->RVE1(1)                          --------->ZAT18               ---- -->HSFB2a(1)           --------->GLK1(1)                          <---------ZAT18               <--- -->HSFC1(2)            <---------GLK1(1)                          --------->ZAT14               ---- --------HSFB2a(2)     --------->ARR11(3)         --------->ZAT6   <---------ZAT14              <---- ------->HSFC1(1)      <---------ARR11(3) ---------->DOF2         <---------ZAT6            ---------   tcgagaaggttgacactgagagagagatatcttgtggctcagaacaaagctaacactcactctcgctagtgtacaccacgcgctgtgtcttcttcaaaga  6308200                                --------->GLK1(2)                               <---------GLK1(2)                                          --------->ICU4                               --------->ARR11(3)                            <---------CCA1(1)    ------>ZmHOX2a(2)      ---------->DOF2                          <---------YAB1        <---------YAB1 --------ARR10       --------->SPL7<---------ANAC46              <---------ATHB51      <---------YAB1 ----->ARR14(2)     --------->SPL1(1)                    --------->DOF5.7(2) <---------RVE1(1) ------ARR14(2)     <---------SPL1(1)                    <---------MYB52(1) <---------ARR14(2) ----->GLK1(2)     <---------SPL1(2)  ----------->GT1   --------->TOE1(3)   --------->ARR11(3) -----GLK1(2)    --------------->AtSPL3                 --------->TOE2(3)   <---------ARR11(3) ->DOF2        ------------------>SPL14         ----------->GT1  --------->ICU4  <---------AHL20(2)   atctgatctgtttctctaatccgtacagaaaaagattctgtggataaaaaatgtgaaacgttagcaaattatgaagaagatatttttttgtgattatttg  6308300               <---------ANAC46               <---------ANAC58               <---------ANAC58       ==========================HOX2a_HOX2a       ===========================HOX2a_HOX2a       <----------DOF2       ------>ZmHOX2a(1)                                                              <----------ID1   --------->ARR11(3)                                  <---------ARR11(3)           ---------->DOF2   <---------ARR11(3)                              <---------ANAC58                 --------->DAG2  --------->RVE1(1)                                <---------ANAC58           <-----------------AGL1  <---------GLK1(1)                                --------->ANAC55(2) <---------MYB52(1)  --------->GLK1(1)        ------>ZmHOX2a(2)       <---------ANAC46   <---------RAP2.6(3) --------->ARR11(3)       <------ZmHOX2a(2)     <----------DOF2       <---------DEAR3(2) <---------ARR14(2)      <---------ARR14(2)    <---------ANAC58     <---------LBD16---------->DOF2 <---------ARR11(3)      --------->ARR14(2)    <---------ANAC58 <----------DOF2<------NtERF2 --------->ARR14(2) <---------ARR14(2)   <---------ALFIN1  <-----------GT1    ------>NtERF2         <   gaagatatcctttttttgtgtgtttccgatccgtctctgacttccacttgctttcgtgatattactctttgccggtttgcccccaaaaaggccaaaacta  6308400                           --------->TOE2(2)                           --------->TOE1(2)                           --------->TOE1(3)                                        <---------AHL20(2)                           --------->TOE2(3)                                        --------->AHL20(2)                          <---------HSFB2a(1)       <-------TEIL              --------->ANAC55(2)                        <-----------GT1     ----------->GT1            --------->AHL20(2)    --------           <---------MYB52(1)               <----------ID1      ----------->GT1    <---------WOX13(1) ---------YAB1       <---------REM1(1)  ---------->DOF2   <---------YAB1      <---------ANAC55(2)   gtctcattgttcagttttgtaagttgtaaccttcgatttttgtaaagggaaaaatacattattcttgagttaaaaaaatcacttgattaattagatgatt  6308500  Previous    Next  AGI:  At1g18330.1    Description:  EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10113.1); similar to EPR1 [Brassica rapa] (GB:ABL97969.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 6305959    to: 6308003    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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