Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                          <---------ARR11(3)                        -                                                         --------->GLK1(1)                          <                                         ---------->ID1  <---------GLK1(1)                          <                                --------->TOE2(3)       <---------ARR11(3)                    <------                            --------->WRKY12  <----------DOF2                                --------                            --------->WRKY38(1)         --------->ARR11(3)                --------->TOE2(3)                 <---------MYB46(3)    <-----------RAV1(1)--------->ARR11(3)    <---------TOE2(3)---- >LBD16      <---------AtMYB61  <---------MYB59        <------ZmHOX2a(1)    <----------DOF2  <-------   tgtgccgatgtttttttggtggtttacgagttgaccttattttgttgtctttttgtaggatatctaagtttgatttttctttgacgaaaaaacattaaaa  6299300                                                            --------->AHL20(2)       --------->CCA1(2)                       --------->TOE2(3) -------->HSFB2a(2)                           --------->ANAC55(2) -------->HSFC1(1)                            --------->ANAC55(1) ---------HSFB2a(2)                           <---------ANAC55(2) ---------HSFC1(1)                         <---------ARR14(2) ---YAB1                        --------->YAB1--------->ANAC46                ---------->DOF2 ->AHL20(2)                    <---------YAB1 --------->ANAC58     <---------ZAT6                   > ----->GLK1(2)            <---------AHL20(2)  --------->ANAC58     ----------->GT1                <-- --AHL20(2)    --------->ARR14(2)          --------->ARR14(2)<---------AHL20(2)     <----------DOF2--   ttctagaagataaacaaaatactcgtgtttattttgataagtgggaatacgtaaactgctcatttaatagtgtaacatattaaaggcttttgtgtcgatt  6299400           <------MYB46(1)           ----------->GT1                                               ------->TEIL           <------MYB83                                                  --------->GLK1(2)      <---------AHL20(2)  <---------ZAT6                                <---------ARR14(1) <---------WOX13(1)   <---------MYB52(1)                                <---------GLK1(2)         <-- >>>>>>>>ARR2      ----------------->AGL1                           --------->MYB52(1)           <--- -------YAB1       <---------YAB1                   <------ZmHOX2a(1)<---------TOE2(3)        ------- ------->ATHB12  <-----------GT1                <---------MYB52(1)  <---------DOF5.7(2)  ---------->DOF2   ttgattgtttatttggttattaccattagtgaaaccaaaatttggaatccattaggaagagttgtctcattaacgaatctcaaaatacagagaaaggagt  6299500                       --------->MYB52(1)        --------->GLK1(2)                          ---------->DOF2       <---------GLK1(2)                        --------->LBD16      <---------At4g35610                      <---------LBD16 -----TEIL        ------>MYB46(1)             <---------LBD16    --------->YAB1 --------GT1      ------>MYB83          <---------YAB1          <---------ATHB12                  --- ---->GT1    --------->MYB52(1)       --------->YAB1            --------->AHL20(2)            -------   tacatttcagattccaaaccgaacaaaaccgagaactcaattacaataaccgggaaagttgagtcaataaatatgtatactttcgatttagcaagttgat  6299600                                    --------->HSFB2a(1)                               --------->ALFIN1                              <-------MYC3                              ------->PIF5                              <-------PIF5                              ------->MYC3                              <-------MYC2                              ------->MYC2                             <---------ANAC58                             <---------ANAC46                             --------->ALFIN1                         ------->GAMYB                             <---------ANAC58  <---------AHL20(2)  ---------->DOF2                       ---------->DOF2         --------->AHL20(2) <---------ATHB12 -------->GT1         <---------REM1(1)      ----------->TBP  ------------>CBF -->ATHB12    --------->AHL20(2)    <---------HSFB2a(1)  ------>ZmHOX2a(1)      *TSS<-----------GT1   tagataaaaaaaaaaaaaaaatagttgaagcgcgtgggaagttccatataaaaatagtcctaaaaccaataacgctcttaacaaattcacatctccctct  6299700                                               --------->HSFB2a(2)                                        --------->LBD16                                       --------->HSFB2a(2)                         ------>ZmHOX2a(1)     <---------HSFB2a(2)                        --------->TOE1(3)      <---------HSFC1(1)    <---------AHL20(2)                        --------->TOE2(3)  --------->ARR14(2)        --------->AHL20(2)            ------>ZmHOX2a(1)         <---------LBD16      <----------DOF2       <----------DOF2        --------->ARR14(2)       <---------GLK1(2) <---------ZAT14 --------->TOE2(3)        <---------ARR14(2) ---------->DOF2 <---------ARR14(2)      <----------DOF2   ctcttatccatttcctctctagacttccttaaatcgattctcccgaattcgagaacagagcctttttttctttaattccaactctttctctcttgttctg  6299800                                                                                            ------>NtERF2                <---------YAB1                                                            ---------->ID1            <---------DEAR3(2)                                                           <-----------HVH21           <---------TOE1(2)                                                            <-----------RAV1(1)        --------->MYB52(2)                                                           --------->ARR14(2)       <-------TEIL                                                              <------NtERF2    <---------MYB46(3)       <---------ICU4                                     --------------------- <---------ANAC58  <---------YAB1                   <----------DOF2       <-----------RAV1(1)<------NtERF2 <---------ANAC58--------->YAB1----------->HVH21    <---------DAG2  <-----------HVH21<---------ARR14(2)   aattcgtggttcgtcggtattataaaaaaaaacatgacagggttctctgtgtctctttttgtgtcaaacttgtcaaatgtggcctcgtatttgtcgccca  6299900                                         <---------HSFB2a(2)                                         --------->HSFB2a(2)                                       <------ZmHOX2a(2)                                      <---------ARR14(2)             --------->ANAC46         --------->ARR14(2)        --------->KAN4(2)        <---------ALFIN1       --------->HSFB2a(1)      --------->LBD16       <---------HSFB2a(1)     --------->LBD16  --------->HSFC1(1)           --------->ANAC46                               --------->ARR14(2)  <---------HSFB2a(2)         <---------LBD16                              <------NtERF2  <---------HSFC1(1)      --------->KAN4(2)                         --------->MYB52(1)  --------->HSFB2a(2)<---------TOE2(3)--------->AGP1   <----------DOF2  <-----------HVH21     <------ZmHOX2a(2) >WRI1<---------KAN4(2)  <---------MYB46(3) ---------->DOF2       <---------SPL7           <---------YAB1   tcttcgagaacatcccctccaccaaggttgttcccgcacagatcgagaaagttgtctctttggtctctcgtaccggtcgcgatttgcagcgttacgatca  6300000                        --------->ANAC58                        --------->ANAC58                        <---------ANAC55(2)                                                        --                        --------->ANAC55(2)                                                  --------                       <-------TEIL                                                          --------                       --------->SPL7                                                        <-------                      <--------P                                                            ---------                   <---------------AtSPL3                                                 <---------At5g28300                   ----------------------->TaNAC69(2)                               <---------AHL20(2)                   <---------MYB46(3)                                              --------->AHL20(1)                  <---------ANAC46                          --------->TOE1(3)      --------->AHL20(2)                 <------NtERF2  --------->ANAC46            --------->TOE2(3)      <---------AHL20(1)        <-----------HVH21     <-----------GT1         --------->HSFB2a(2)          <---------AHL20(2)       --------->YAB1<---------MYB52(1)               <---------HSFB2a(2)         --------->AHL20(2) ------>NtERF2  <-----------HVH21               <---------AHL20(2)     ---------->ID1    <-----------GT1   cgctggctatcgtcaagtcgtcgggtacgtcttaacgcctcttcgttcatttttttccaaaaccctaatttttgttcttatcaaattaattttaccccta  6300100                                               <------MYB46(1)                                               <------MYB83                                         <                                               ----------->GT1                                   <---                                              --------->MYB46(2)                                 <---                                              --------->MYB59                                    ----                                      --------->YAB1                                             ----                                      <---------ICU4                                            -----                                      --------->ATHB12                                          -----                                      -------->HAHB4                                          -------                                     --------->ICU4                                      --------->TOE2(3)                                   <---------ICU4                                        --------->TOE1(3) ------->YAB1                      --------->YAB1          <---------ANAC46            ------->TEIL - ->ANAC46 <----------DOF2         <---------ATHB12        <---------TOE2(3)           --------->MYB52(1) ------->AGL15    <---------MYB52(1) <---------YAB1  <---------AHL20(2)              ------->GAMYB <- --------AGL15   <-------GAMYB    --------->ICU4     --------->AHL20(2)             <---------MYB52(2) -------->AGL2  <---------MYB46(3)<---------ATHB51  --------->ICU4                  --------->MYB46(3)   attagaaattagctttggccgttgttcaaattcacaataatgattagtttggtaaatatttaggtgtaatttgatatagttttacaacgaacgttagaat  6300200  Previous    Next  AGI:  At1g18300.1    Description:  ATNUDT4 (Arabidopsis thaliana Nudix hydrolase homolog 4); hydrolase. Identical to Nudix hydrolase 4 (NUDT4) [Arabidopsis Thaliana] (GB:Q9LE73); similar to ATNUDT21 (Arabidopsis thaliana Nudix hydrolase homolog 21), hydrolase [Arabidopsis thaliana] (TAIR:AT1G73540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44734.1); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 6299680    to: 6301079    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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