Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <-------GAMYB                        ------>NtERF2                       --------->DEAR3(1)                       <---------ALFIN1                      <---------ABI4(2)                      --------->ATERF1(1)                     --------->LBD16                     <---------ATERF1(1)                    --------->ANAC46                    --------->RRTF1(2)                      <---------ATERF1(1)                    --------->RAP2.6(2)                     ------>NtERF2                    --------->ATERF1(2)         ------>NtERF2                    --------->RAP2.3(2)         <------NtERF2--------->RAP2.3(1)                    --------->DREB2C(2)         --------->LBD16                    <---------ATERF1(2)        --------->DEAR3(1)                    --------->DEAR3(1)         --------->ANAC58                   <---------LBD16             --------->RAP2.3(2)                   --------->ATERF1(1)         --------->RAP2.3(3)                                  -                   --------->RAP2.3(1)         --------->RRTF1(3)                            --------                   --------->ERF1              --------->RRTF1(2)                 ------>ZmHOX2a(2) <                  <---------ATERF1(1)          --------->RAP2.6(2)       --------->ANAC58    <-------TEIL                  ------>NtERF2                --------->ANAC46--------->ZAT18   <------ZmHOX2a(2)<--                 --------->DEAR3(1)            --------->ANAC58<---------ZAT14  --------->AGP1  -----               <---------At5g28300            --------->RAP2.3(1)  ----------->HVH21<-----------HVH21             <-------TEIL<------NtERF2        --------->RRTF1(1)<------NtERF2   <---------ARR11(3)<--          <---------MYB46(3)   <-----------RAV1(2)        <---------MYB52(1)    <---------AGP1-------        <------NtERF2<---------DEAR3(2)     --------->DEAR3(1)<---------ANAC46  <---------ARR14(2)<--       --------->LBD16<------NtERF2         ------->GAMYB--------->LBD16 --------->ANAC58   ---------       <------NtERF2--------->RAP2.3(3)    --------->MYB46(3)--------->ATERF1(1)--------->ARR11(3)===     <---------ANAC46------>NtERF2         --------->DEAR3(2)<------NtERF2      --------->ARR14(2)<--     <---------LBD16<---------DEAR3(1)   <---------ARR14(2)--------->ALFIN1    <---------CCA1(2)-----  --------->ALFIN1--------->ABI4(1)      --------->ARR14(2)<---------DEAR3(1) ----------->ARR10 <---- -------->ALFIN1--------->MYB46(3)<------ZmHOX2a(1)    <---------LBD16 <---------ALFIN1  <---------TOE1(2)   gagagtggccggaggttcaccgccggcaccgttgcaggagagagaaccgccgcaatctccggtggcgcagtgaccacggccagatctgtcgaaggtgcag  6277600                                                                                    --------->ATERF1(1)                                                                                    <------NtERF2                                                                                   --------->LBD16                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                  --------->RAP2.3(2)                                                                                  <---------DEAR3(1)                                                                                  --------->ATERF1(2)       ----------->RAV1(1)                                                        --------->DEAR3(1)     --------->ATERF1(1)                                                         <---------LBD16    ------>NtERF2                                                                --------->ATERF1(1)    <---------ATERF1(1)                                                          --------->DEAR4(2)   <---------ANAC58                                                              --------->RAP2.3(1)   <---------ANAC58                                                              --------->ERF1  <------NtERF2                                                                 --------->ABI4(1) --------->REM1(2)                                                              ------>NtERF2 -------->ALFIN1                                                                <---------ATERF1(1) ->At4g35610                                                                   --------->DREB2C(2) ---------DEAR3(1)           <---------AtMYB61                                 --------->DEAR3(1) -------ANAC58      <---------SPL7                          <---------At4g35610<---------ALFIN1 ->NtERF2   <---------ARR14(2)  <---------ANAC46            --------->ZAT2  <---------ALFIN1 -------ANAC58      ----------->HVH21<---------At4g35610    <---------ZAT2  --------->AtMYB61 -->ATERF1(1)       <------NtERF2    --------->At4g35610    --------->At4g35610------->GAMYB -------O2  --------->ARR14(2)<---------MYB46(3)           --------->MYB52(2) --------->MYB46(3)    < >ALFIN1  --------->LBD16    --------->ALFIN1    --------->ZAT18   --------->At4g35610           <--- ============================================MYC_MYB     <---------MYB52(1)--------->MYB46(3)   ----- -------TGA1a--------->MYB52(1) --------->ALFIN1 <---------ZAT18   ----------->GT1<---------ATERF1(2) ---->At4g35610    --------->RAP2.6(2)          --------->ALFIN1   <---------At4g35610          ----- -----At4g35610--------->MYB46(3)    <-------GAMYB   <----------DOF2--------->TOE1(3)<---------ANAC46   ccgtggcgaccccagaaacggccggaccagagtggtgggagttgaagagagtgggctttgttagctggaagcttaaaaccaccgccggcgagtaagtttt  6277700            <------MYB83            <------MYB46(1)          <--------P         <-------GAMYB         <---------ANAC46     <----------CDC5     --------->ATERF1(1)                                         --------->At4g35610     <------NtERF2                                               <---------ZAT2    ------>NtERF2                                          <-------GAMYB   <---------DEAR3(1)                                    <---------TOE2(3)  --------->RAP2.3(1)                          <---------HSFB2a(2)        ---------->DOF2 <---------ATERF1(1)                      <-----------RAV1(1)    <---------At4g35610            <---- ---------DEAR3(1)            <---------ANAC46 --------->HSFB2a(2)  --------->At4g35610     --------- ------WRKY18(1)      ----------------->AGL1 <---------REM1(1) <---------------------WRI1  --------->YAB1 ------>HVH21    ----------->RAV1(2)      <---------MYB46(3)  ---------->DOF2           ---------->DOF2 ---->WRKY38(1)<---------GLK1(1) <---------MYB46(3)     <---------At5g28300          ----------->RAV1(1)   gaccggcgctgggttggatacctggccaaactgggtgtttgcatttgttgtagaagattaccgttgaagctgctctcaaagaaacaacaacaaagatagt  6277800                        --------->ARR11(3)             <---------YAB1                        <---------ARR11(3)            --------->AHL20(2)         <---------ARR14(2)                      <---------ZAT18         --------->ARR11(3)                      --------->ZAT18                               ------         <---------ARR11(3)                      <-------TEIL                               ---------         --------->ARR14(2)                  --------->DAG2                                 ---------         --------->GLK1(2)                  ---------->DOF2                                 --------- -----ZAT6         ---------->DOF2       <---------AHL20(2)                               --------->MYB52(1) >ARR11(3)       <---------MYB52(2)      --------->AHL20(2)                       ---------->DOF2 ---   ggtattagaaaaatctgcaactaaagtatctctaaatctatatttaaaaagtgcatttttattcatacatgggcgagattgaagcaaagactaaacgaaa  6277900                   --------->ANAC58                   --------->ANAC58                <---------ZAT2            --------->CCA1(2)            <------ZmHOX2a(2)           --------->ARR11(3)           <---------ARR14(2)           <---------ARR11(3)       ---------->DOF2      <---------AHL20(2)                           ------------------------>ANAC81      --------->AHL20(2)                    <-----------HVH21 --->MYB52(1)   --------->ZAT2             <---------ANAC46                          <---------WOX13(1) >ANAC46   --------->ARR14(2)              <---------ANAC58                        --------->ATHB12 >ANAC58   <---------AGP1                  <---------ANAC58                       <-------TEIL >ANAC58   --------->AGP1            --------->TOE1(3)         ---------->DOF2   <--------P -------->GT1------>ZmHOX2a(2)      ----------->RAV1(2) >>>>>>>>>TBF1     <------ZmHOX2a(1)     -----   cagaaaatttaaagatctagcagggaatgtgaagagaaacctgaagcgtgagagagaagaagaaggaaagcgaagaggaagaggttgattgaagccattg  6278000                                                                                 <---------YAB1                                                                               <---------AHL20(2)                                                                               --------->ATHB12                                                                              --------->AHL20(2)                                                                              --------->ICU4                                                    <----------DOF2        --------->AHL20(2)                                                    <---------------AGL15 --------->AHL20(1)     <----------DOF2                                --------------->AGL15 <---------AHL20(1)   --------->At4g35610                              <---------DAG2  <---------TOE2(3)   --------->GLK1(1)                   <-----------GT1<-----------TBP  >>>>>>>>>>GT-3b   <---------AHL20(1)   <---------At4g35610                *TSS         <-----------------AGL2 <---------ARR11(3)  <------ ---->ATHB12                        ----------->GT1<-----------------AGL3 --------->ARR11(3)<--------   atgggagctctactgagcaagagtgagactgaatcaacttgttacttctcagtgctttttatggaattttaagaaaaatatttattagtagtatattttt  6278100                                               --------->ANAC58                                               --------->ANAC55(1)                            <---------ICU4     <---------TGA1a                            --------->YAB1     --------->ANAC55(2)                            -------->HAHB4     <---------O2                           --------->ICU4      --------->TGA1a                           <---------ATHB51    --------->ANAC58                                     <                      ----------->GT1          --------->O2                              <----------DOF2                <---------LBD16                --------->ANAC46              <---------ANAC58   <----            --------->GLK1(2)                <---------ALFIN1                <---------ANAC58 ------- ---AHL20(2)--------->ARR14(2)          <-----------GT1              <---------ZAT6      <---------DAG2 -AHL20(2)  <---------ARR14(2)      <-----------ARR10      <-----------HVH21 <---------ANAC46<-------   tgaaaaaatgagagaatttggggaatgtaataatggcaaatgttaccacacgtctcgagactgtcagaccagagttagtgcgtagtactagcttttttct  6278200                                                                                                  ---                     <------------AtMYB77                                                        ---- -----------GT1    <-----------GT1           <-----------GT1   --------->YAB1                   ----- ------DOF2        ------->TEIL         <----------DOF2     <---------CCA1(2)      <---------ALFIN1 --->ID1       <---------TOE2(3)        <---------DAG2 --------->ARR14(2)        ----------->RAV1(1) ----GT1--------->YAB1              ------>ZmHOX2a(1)  <---------ARR14(2)<---------TOE2(3)     <-----   ttttacacagtcaaaataatgtaactggccatttcatcctcacttttcaactcttcatattcgtatcatcgtataaaggtttgcaacacttgattcgact  6278300                                                            --------->ANAC58                                                            <---------ANAC58                                                            <---------ANAC55(2)                                            --------->ANAC58<---------ANAC58                                            --------->ANAC58--------->ANAC58                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                           --------->SPL7   --------->ANAC55(2)           ---------->DOF2              <------MYB46(1)    <-------TEIL          --------->AHL20(2)            <------MYB83   --------------->AtSPL3      --------------->AGL15            <---------------AtSPL8  ------->TEIL      <---------------AGL15            --------->MYB59 <---------------AtSPL8 ------>RAP2.6(3)              --------->At5g28300 <---------YAB1           <---------YAB1 ----->MYB52(1)               ----------->GT1     --------->AHL20(2)    <---------ANAC46 ----------->GT1 ------>HVH21          --------->ARR11(3)<---------SPL7<---------------AtSPL3    --------->ZAT18 ----MYB52(2)      ---------->DOF2     <---------------AtSPL3  <-----------HVH21 <---------ZAT18   aacggctacaaataaaagaaaaaaagaactaggggtaaaatttggtacggattaatataggtacgtatcacatggagtattagtgaacaacatgtaaaat  6278400                                                   ---------->DOF2                                              >>>>>>>>>MYB98                                            ------>ZmHOX2a(1)                                     <--                        <-----------GT1     =======================HOX2a_HOX2a                    ---                  <---------AHL20(2)        ======================HOX2a_HOX2a                    <---              <---------AHL20(2)          ------>ZmHOX2a(2)                                     <----              --------->AHL20(2)         <------ZmHOX2a(2)                                      <----             <---------AHL20(2)         --------->ARR14(2)      <---------YAB1                 ------             --------->AHL20(2)         --------->ARR11(3)  ------>ZmHOX2a(2)             ===========             <---------AHL20(1)         <---------ARR11(3) <------ZmHOX2a(2)              ---------->DOF2             --------->AHL20(1)         <---------ARR14(2)<---------ARR14(2)     --------->DEAR3(1)          <---------AHL20(2)           --------->GLK1(1)  --------->ARR14(2)     <---------DEAR3(1)          --------->AHL20(2)           <---------At4g35610--------->ARR11(3)    --------->ATERF1(1)         <---------AHL20(2)            <---------GLK1(1)  <---------ARR11(3)    <------NtERF2  ------         --------->AHL20(2)           ----------->ARR10 --------->DEAR3(1)      <--------------------   agaacattgtattaatttatttagttttaccatttggacgcagatcctaacaaaaacgccgatcttgtgaatgtgcttagtcgtcgacgcttaaaagtag  6278500  Previous    Next  AGI:  At1g18250.1    Description:  ATLP-1 (Arabidopsis thaumatin-like protein 1). Identical to Thaumatin-like protein precursor [Arabidopsis Thaliana] (GB:P50699;GB:Q9LM26); similar to thaumatin-like protein, putative / pathogenesis-related protein, putative [Arabidopsis thaliana] (TAIR:AT1G73620.1); similar to pathogenesis-related group 5 protein [Brassica rapa] (GB:AAB95118.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 6276781    to: 6278038    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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