Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->MYB46(3)                                                              <---------At4g35610                                                            <-----------bZIP910(2)              <-----------TGA1                             <------NtERF2                <---------ZAT14             <<<<<<<<<<HY5                                 <---------MYB52(1)           --------->ZAT14             --------->ANAC46                             ------>NtERF2 --------->ARR14(2)             --------->bZIP60(1)                          <-----------TGA1              --------->ZAT18             --------->O2 <---------HSFB2a(2)            --------->DEAR3(1)             <---------ZAT18             <---------bZIP60(1)                         <---------ATERF1(2)    --------->TOE1(2)             <---------O2 --------->HSFB2a(2)            --------->RAP2.3(3)    --------->TOE2(2)             --------->TGA2(1)                           --------->ATERF1(2)   --------->YAB1             --------->bZIP60(2)                        --------->RAP2.3(1)   <------ZmHOX2a(2)             <---------TGA2(1)                        --------->DEAR3(1)<---------ARR14(2) <------ZmHOX2a(1)      --------->At4g35610 <---------TOE2(3) --------->At4g35610   <---------------AtSPL8 --------ANAC46--------->TGA2(2)            <---------YAB1<---------SPL7<-----------HVH21           - --GAMYB    <-----------STF1               <-----------GT1<-----------HVH21   <---------ATHB12   ----   tgaggagagaagacgacgtcatcatcttctgaaactcttcgaaattaacattcccatcgccgtcagcatccacaggtccgatcatacgagtacagtcttc  6268400                                                                                                   ==                                                                                                  ===                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                              -------                                                                                              -------                                                     <------ZmHOX2a(2)                        -------                                                     ========================HOX2a_HOX2a      -------                                                    <---------ARR11(3)                        <------                                                    --------->ARR11(3)                       <-------                              <-------PIF5         <---------GLK1(1)                        ---------                            ------->TEIL          ----------->ARR10                       <----------                         --------->ANAC58        <------NtERF2                            <----------                         --------->ANAC58      <---------ANAC46                      ---------->DOF2                     <-------GAMYB             <---------DEAR3(1)         ------>ZmHOX2a(2)----------                    ----------->GT1   --------->At4g35610             ===============================               --------->LBD16------->PIF5    <---------LBD16         ===================HOX2a_HOX2a      --------->ANAC58 ---------->DOF2<---------At4g35610             ------>ZmHOX2a(1)  xxxxxxxxxxxx      --------->ANAC58<---------MYB52(1) ---------->CDC5     <---------MYB52(1)   =================== ------>GAMYB --------->LBD16----------->RAV1(2)--------->LBD16    ---------->ID1 <------ZmHOX2a(2)-- ------->RAV1(1)----------->HVH21 <---------REM1(1)--------->GLK1(1)  ===============================   aacagagcaagacatcccgagacggttaagcacctggtgaagctcagaggcggagatcagtccgtttttgtcctgatcgtagagatcgaaagcgtcacgg  6268500       --------->ALFIN1       <---------ANAC46      ------>NtERF2      <------NtERF2      --------->ATERF1(1)      <---------At4g35610     ------>NtERF2     <---------RRTF1(1)     <---------RAP2.3(1)    <---------DEAR3(1)    <---------RRTF1(2)    <---------RAP2.3(2)   <---------LBD16   --------->At4g35610   <---------At4g35610  <-----------RAV1(1) ==================HOX2a_HOX2a ==================HOX2a_HOX2a ----ZmHOX2a(2) ------>GLK1(1) -------GLK1(1) ------ARR11(3) ----->ARR11(3) ------ARR14(2) ----->ARR14(2) --------ARR10 ------AGP1 --->TEIL                                                                                        <--- -----CCA1(2)                                                                                   <---- -->ANAC55(1)                                                                                   <---- -->ANAC58                                                         ------>ZmHOX2a(2)         <------- -->ANAC58                                                        <------ZmHOX2a(2)         <-------GAMYB -->ANAC55(2)                                              <-----------HVH21               <---------MYB46(3) ---ANAC55(2)                                             --------->DEAR3(1)             <-------PIF5 --LBD16                                                 <------------AtMYB77            ------->MYC2 >MYB52(1)  <------ZmHOX2a(1)                            --------->DEAR3(2)              ------->PIF5 -HVH21<---------DEAR3(1)                           <---------REM1(1)                    <-------MYC2 -TGA1<---------LBD16                              <---------TOE2(3)                     <-------MYC3 ->HVH21 <------NtERF2                           <-------TEIL    <---------ARR14(2)      ------->MYC3 ====HOX2a_HOX2a                     --------->ARR14(2)  --------->MYB46(3)             --------->ANAC46 xxxx>smallRNA(s)                    <---------ARR14(2) <---------At5g28300             --------->ANAC58 ==================HOX2a_HOX2a       --------->GLK1(2) <-----------GT1                  --------->ANAC58 ---->ZmHOX2a(2)      ----------->RAV1(1)       <--------P------->GAMYB            <---------HSFB2a(2) =====HOX2a_HOX2a    ----------->HVH21       <---------TOE2(3)   --------->ARR14(2)--------->HSFB2a(2)   atctctgcggcggaggaagacgagcgacagagagttgagaattcgtcgaggttgatgtaaccgtcgcgatctgtatcgacttcttcgagcacgcggttga  6268600                                                                       <------NtERF2                                                                      ------>NtERF2                                                                     --------->DEAR3(1)                                                                   <-----------HVH21                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                  <---------ATERF1(2)                                                                  --------->DEAR3(1)                                                             ------>ZmHOX2a(2)                                                           --------->ARR11(3)                                                           --------->AGP1<-------GAMYB                                                    <------ZmHOX2a(1)<---------DEAR3(1)                                           ------>NtERF2   --------->ARR14(3)          --------->REM1(2)               --------->DEAR3(1)<------ZmHOX2a(2) <---------ANAC55(1)                    --------->ABI4(1)  <---------ARR11(3) <---------ANAC55(2)                    ------>NtERF2      <---------ARR14(2) <---------ANAC46                      --------->DEAR3(1)  <---------ARR14(3) <---------ANAC58                     --------->MYB46(3)   --------->ARR14(2) <---------ANAC58                     --------->DEAR3(2)  --------->GLK1(1) --------->ANAC55(2)                <---------ALFIN1===============HOX2a_HOX2a ------GLK1(1)              --------->TOE2(3)    <---------HSFB2a(2)--------->ATERF1(1) -----ANAC58                --------->TOE1(3)    --------->HSFB2a(2)<------NtERF2 -----ANAC58                --------------------->WRI1   ----------->ARR10<---------MYB52(1) --MYB52(1)   <------ZmHOX2a(1)     --------->ANAC46================HOX2a_HOX2a   gttccgtctctgtgtaggaagtccccatagccttaaacacaccgccgagttcgaggactgagatcttgccgtcgccgttggagtcaaactggtcgaaaac  6268700                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                     <----------DOF2                                                    <-------GAMYB                                                   <---------MYB46(3)                                         <------NtERF2                                       <---------O2<---------DEAR3(2)                                       <---------TGA1a                                       --------->ALFIN1                                       <---------ANAC58     <---------GLK1(2)                                       =====================MYC_MYB<---------ANAC58                                       <---------ANAC46     --------->ARR14(2)                                       <---------ANAC58     <---------ARR14(2)                                       =========================bZIP_DOF                                   <-----------RAV1(2)   --------->HSFB2a(2)                               <-------GAMYB      <---------RAP2.6(2)                               ==================MYC_MYB<---------LBD16                      --------           <---------LBD16--------->ZAT18--------->ALFIN1<---------HSFB2a(2)             <---------TOE2(3)          ------>ZmHOX2a(1)<---------ALFIN1       <---------ANAC46 <---------ANAC58    ---------->DOF2     <---------At4g35610  --------->ETT(2)        <---------DEAR3(1)        <---------AHL20(2)-------   tttcttaagctcctctggattagccatgtccaccgttgcaggcgtgggtttggcggtttctggattcgcgcttgccattttttttttgttaaaggtaaag  6268800                                                   <---------ARR11(3)                                                   --------->ARR11(3)                             <--                                             <---------YAB1                                 ---------                                            <-----------TBP                                 ------->TEIL                                          <----------DOF2                                   <--------                     --------->YAB1      <---------DAG2                                     <--------                     *TSS              ---------->ID1 <----------DOF2                       --------- -->DOF2          --------->WOX13(1)  <---------WRKY18(1)                  <-----------GT1 <---------ARR14(1) -->DAG2   ---------->DOF2            <-----------GT1<---------DAG2 <-----------GT1        <---------CCA1(2)   ttggagagagagataaagagcaattagaagatgatgagtttgacctttttatagaccttttcgctagatgtcactatttacaagtttggaatcgaatctt  6268900                        --------->GLK1(2)                        ------->TEIL                        --------->ARR14(2)                     --------->ANAC55(1)                                                           --                     <---------ANAC55(2)                                                      -------                     <---------ANAC55(1)                                                      <------                     --------->ANAC55(2)         <-------GAMYB                         <----------DOF2    --------->AHL20(2)  <---------ARR14(2)      <------MYB46(1)                <---------AHL20(2) <--    <---------AHL20(2) <---------CCA1(2)        <------MYB83 ------->TEIL      --------->AHL20(2) --- -------ANAC46   --------->YAB1          --------------->AGL15            <---------MYB52(1)  <------ >GLK1(2)       <---------YAB1           <---------------AGL15         =======================HOX2a_HOX2a -ARR11(1)     --------->AHL20(2)        ============================================================ -ARR14(2)   <---------MYB52(1)         <-----------------AGL2         ------>ZmHOX2a(2)   <--------- >ARR14(2)  <-------GAMYB            <---------ARR14(2)   <---------YAB1----------->GT1------>ZmHOX2a(1)   gtgtatttaatttccgttataatacgtatctggtttgggaatactgtatttggttgaaatatgaatgttttgatctgttatttaaaatccttttttctaa  6269000 -------->DOF2 -------->AGL15 ---YAB1 -------AHL20(2)         --------->AHL20(2)                                       --------->DAG2 ------>AHL20(2)        <---------YAB1                                           ---------->DOF2 ---------AGL15      <---------YAB1                                  <----------DOF2 =========MADS_MADS----------->GT1       --------->YAB1    <---------YAB1     <------ZmHOX2a(1) --GT1     ----------->GT1   <-----------GT1         <----------DOF2 <---------DAG2   ttaaagagaagtaatgttatatggttattatatacactctcaaacatggtattctctttttataaatactacttttgctaggaaaaaggaaaactaaaat  6269100                                                      <---------TOE2(3)                                                   <---------YAB1                                                   <---------AHL20(2)               <----------------                                                --------->ARR11(3)                 --------->MYB52(1)                                             <---------TOE2(3)                  <---------ANAC58                                       --------->HSFB2a(1)                      <---------ANAC58                     ---------->DOF2   <---------HSFB2a(1)                  <-------MYC3        -----            --------->YAB1  --------->AHL20(2)  <---------ARR11(3)          ------->MYC3        -----         --------->YAB1     <---------AHL20(2) <------ZmHOX2a(1)           --------->O2      <------NtERF2  <----------DOF2 --------->YAB1  <---------------AtSPL8  <-----------GT1  <---------O2   --------->RAP2.6(3)   actactttcaatattcacaatgaaaaagaattatatatggaacgttttaggatattaatgttactctcagtctttccacatggcttaacgaagacggcaa  6269200                 <---------ANAC58                 <---------ANAC58                 <---------ANAC46             ------->MYC2             <-------MYC2             ------->MYC4             <-------MYC4             <-------PIF5             ------->PIF5             <-------PIF4             ------->MYC3             ------->PIF4             <-------MYC3            <---------ANAC46            <---------ANAC55(2)            --------->ANAC55(2)            <---------TGA1a            <---------ANAC58            --------->O2            <---------O2            --------->TGA1a          <-------------DYT1        <-----------HVH21                        <---------AHL20(2)       --------->bZIP60(1)                    ----------->GT1       <---------bZIP60(1)                    --------->TOE2(3)                          --------->LBD16   <---------GLK1(2)--------->YAB1           ----------->GT1                             ------>ZmHOX2a(1) --------->ICU4------->TEIL             --------->At5g28300                      <-----------GT1 -AGL1 --------->TGA2(1)             --------->At4g35610                         --------->YAB1 ---->ANAC58<---------bZIP60(2)      <---------At4g35610     <-------TEIL  --------->ANAC58 ---->ANAC58<---------ANAC58       <---------RAP2.6(2) ---------->DOF2     --------->ANAC58         -   ggcaagattatgtcacgtgccttgataatttgttttttcggctgtaaatgttaaaatgaaagttacatttgtttaagacgaaataacaatcctgaaacag  6269300  Previous    Next  AGI:  At1g18210.1    Description:  calcium-binding protein, putative. similar to calcium-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G73630.1); similar to calcium binding protein [Sesbania rostrata] (GB:CAC43238.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 6267962    to: 6268821    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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