Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ATHB12                 --------->ZAT14               --------->YAB1                 <---------ZAT14      <---------REM1(1)                                <---------bZIP60(1)             <---------ICU4           ----------->GT1                                  --------->bZIP60(1)          <---------GLK1(1)         ----------->GT1              <---------TOE2(3)     --------->ANAC46          --------->GLK1(1)    <-----------RAV1(2)          --------->ATHB12 <---------ZAT2     --------->At4g35610  ----------->HVH21 --------->YAB1 <---------ATHB12  --------->ZAT2   tagtataagcagaaatcagtgcaatgcaatgacccagatggtgtaacaataacattgccaaatgatttagattagtccaagcttgaatcacatcacatca  6261100                               --------->MYB52(1)                    ------>MYB83  ------->GAMYB      --------->ARR14(2)      <---------WRKY38(1)    --------->LBD16 ------>MYB46(1)   --------->HSFB2a(2)        <---------WRKY12   --------->LBD16  --------->ARR14(2)   <---------HSFB2a(2)   <---------MYB52(1)                                                      ----   --------->ANAC46 <---------ARR14(2)                                                           ----  --------->HSFB2a(2)   --------->LBD16               --------->ANAC58                           ----  <---------HSFB2a(2) <---------LBD16                 --------->ANAC58                        -------  <---------LBD16  --------->WOX13(1)               ---------->DOF2           <---------TOE2(3)  ==== <---------LBD16  --------->AtMYB61   <------ZmHOX2a(1)           <---------AtMYB61           <------   atttcccggaaactaagacaccaatccggtgatcaacggaggaattaagagtcccaaagcaaaccatggaggtcgaaattaagctagagcccagcgaatt  6261200                                                                                          <---------At4g35610                                                                                     <----------DOF2                                                                                   <------NtERF2                                                                                 <---------RAP2.3(2)                                                                                 <---------DEAR3(1)                                                                                 <---------RAP2.6(2)                                                                                <---------At4g35610 <---------ARR14(2)                                                             --------->ATERF1(1) --------->ARR14(2)                                                             <---------LBD16 ------------->AGL1                                                            <---------RAP2.3(1) ------------->AGL2                          <-------TEIL                     <---------DEAR3(1) ------------->AG          --------->AtLEC2 --------->CCA1(2)--------------->AGL15<---------RAP2.3(1) -->GLK1(1)            <---------------------WRI1            <---------------AGL15------>NtERF2 ============================================================================MADS_MADS    --------->At4g35610 ---ARR14(2)        <---------MYB52(1)   ----------->ARR10 -------->P         <---------RAP2.6(2)   -   ccaaatccagtatttttcatccgttttcgatgcaaacaaaaatgagattcgacatctctcttacctgttgaagaattgtttcggcggctttgagcttcga  6261300                                                                     <---------MYB52(1)         --------->ANAC46                                       <---------ALFIN1  <------ZmHOX2a(2)           <----------DOF2                --------->ANAC58  --------->CCA1(2)       <---------ZAT14                    --------->ANAC46 <---------ARR11(3)       --------->ZAT14                    --------->ANAC58                      -- <---------ARR14(2)  <---------ZAT14                         ----------->HVH21                     <- --------->ARR14(2) <----------DOF2               ---------->DOF2------>NtERF2                     -- --------->AGP1    <---------ANAC58 ---------->DOF2         --------->SPL7<-----------GT1--------->GLK1(1) -------->GLK1(1)  <---------ANAC58<------ZmHOX2a(1)      --------->TOE1(2)              <---------GLK1(1)   cgagatccaattcgccattttgcttcactgctctttaggaaagtgatgagactaaagaaccatacgacaccgttttttatcacccagagtgatttctgaa  6261400                                                                 <---------ANAC58                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                <------NtERF2                                                            <------MYB46(1)                                                            <------MYB83                                                           <---------AtMYB61                                                        --------->ALFIN1                                                        <-----------RAV1(1)                                                      =====================================MYC_MYB                                                      --------->O2                                                      <---------ANAC55(1)                                                      <---------TGA1a                                                      <---------bZIP60(2)                                                      =============================================bZIP_DOF                                                      <---------ANAC46                                                      --------->TGA1a                                                      <---------ANAC58                                                      <---------ANAC55(2)                                                      --------->ANAC55(2)                                                      =============MYC_MYB                                                      <---------ANAC58                                                     <-----------------------TaNAC69(2)        --------->At4g35610                          ----------->STF1    --------->ANAC58                               ----------->HVH21               --------->ANAC46    --------->ANAC58                               ----------->TGA1                ------->GAMYB ------->ZAT18           <----------ID1        <---------At5g28300                --------->MYB46(3) --------ZAT18     <----------ID1          <---------ICU4 <--------P   <---------AHL20(2) ------->ZAT14   --------->MYB52(1)  ------->TEIL *TSS<---------O2  <---------TOE1(2)   ---------->DOF2   ttgcactcgcatcagaaaaaaacgaagaagacgaagatgaatcaattgttacagtgacgtgttggtgtcgtagtttatttagcaaacgccgaaagagact  6261500                    --------->LBD16                <---------ARR14(2)                --------->ARR14(2)                --------->GLK1(2)                                --------->ANAC55(2)             --------->RAP2.6(2)                       <---------TOE1(2)           --------->At4g35610                       <----------DOF2           <---------At4g35610              <-------TEIL<---------MYB46(3) --------->YAB1    ------->GAMYB <---------LBD16      --------->ANAC55(2) <-------TEIL   <---------ATHB12   <---------MYB52(2)         <-----------GT1--------->ATHB12    <---------ANAC55(2)--------->AtMYB61   ccacaactaactcagccgaatccggttttatttttcggtttacatattcatttgtctttggttcattacatattcaataatccaaaccaaaaccaaaaac  6261600                                                          --------->LBD16                        --------->MYB46(3)               <---------ANAC46        <-----------GT1           <---------DAG2                            <---------ARR14(2) <---------DAG2           <----------DOF2            <<<<<<<ZML2    --------->ARR14(2) <----------DOF2      <-------   ttggattaaaacacttttttttttcaaccgatataaactagaactcaaatgagccaatcccgtggattaaaacactttatagtttaccatttgtgatttt  6261700                              --------->YAB1                              <------ZmHOX2a(1)                                                <-----                    --------->AHL20(2)                          --------->AHL20(2)             <-----                <---------RAP2.6(3)      <---------YAB1         <---------AHL20(1)             ------                ------>NtERF2----------->GT1                    <---------AHL20(2)       --------->YAB1               --------->DEAR3(1)   <---------------AtSPL3     --------->ICU4    ---------->DOF2<----   --------->AHL20(2)       <---------TOE2(3)       <---------YAB1              <---------AHL20(2) --YAB1      <---------ZAT18<---------TOE1(3)   --------->TOE2(3)<---------AHL20(2)<---------TOE2(3)   tgtaagtaaatgcagtgccgacttaaatataaggataaatagtacgatagccttatatttgggtaattttttttttgtatatataaaggaagcataattt  6261800      <---------ANAC58      <---------ANAC46      <---------ANAC58         ----------->GT1                              --------->ANAC58     ---------->ID1           ----------->GT1                       --------->ZAT18 ----AHL20(2)              --------->CCA1(2)                     ---------->DOF2          <---------- ----AHL20(1)         ---------->DOF2                          ---------->DOF2<---------ARR11(3) --->AHL20(2)       <---------AHL20(2)               --------->AHL20(2)     --------->ANAC46 -----AHL20(2)--------->AHL20(2)<------ZmHOX2a(1)    <---------AHL20(2)     --------->ANAC58       <-   tttttttggcgtttttttatatataaaagagacaggaaaaatgatatatacaaaattatatatgcaaaagagccctacaagaaattttaaaaataccact  6261900                                                                                 ----------->GT1                                                                              ----------->RAV1(1)                                                                              ------------>AtMYB77                                                                          --------->ANAC58         <---------YAB1           --------->ANAC46                      ---------->DOF2       --------->AHL20(2)         --------->ANAC58                   --------->LBD16       <---------AHL20(2)         --------->ANAC58                  --------->HSFB2a(2)   --------->AHL20(2)        <---------ZAT18      <------ZmHOX2a(1) <---------HSFB2a(2)  --------->ICU4             --------->ZAT18  <XXXXXXXXXXXXXXXXXXXXMIR779.1   --------->MYB52(1)  <---------YAB1          --------->SPL7      --------->At4g35610--------->ARR14(2) -GT1 <---------AHL20(2)<---------SPL7   --------->CCA1(2)       <---------ARR14(2)              <--- --------YAB1      <---------AHL20(2)   --------->AHL20(1) <----------ID1 --------->ANAC58  <--------   tgtgattatttatttttaaaatttatcgtagggcacaagaaatatatgagcaggaacatataagacaaatccagaaaagccaacagttacaaaattacat  6262000  Previous    Next  AGI:  At1g18190.1    Description:  GC2 (GOLGIN CANDIDATE 2). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68178.1); contains domain GOLGIN-84 (PTHR13815) Range:  from: 6257844    to: 6261450    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version