Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------bZIP60(1)                                                        --------->bZIP60(1)                                                        --------->TGA2(1)                                                        <---------TGA2(1)                                                     ----------->HVH21            --------->ARR11(3)                                                    <-------MYC3                  <---------ARR14(2)                                                    ------->MYC3                  <---------ARR11(3)                                                    <-------MYC2                  --------->ARR14(2)                                                    <-----------HVH21         <------ZmHOX2a(1)                                                    ------->MYC2          <---------MYB52(1)      ---                                                    ------->PIF5         ============================ <---------ANAC58                                   <-------PIF5        <---------MYB46(3)      ----- <---------bZIP60(2)                               --------->bZIP60(2)  <---------DEAR3(2)      <---- <---------O2                                      <---------ANAC55(2)  --------->MYB55(2)      ----- <---------TGA1a                                   --------->ANAC58    <---------DEAR3(1)       ----- <---------ANAC58                                  --------->ANAC58   <------NtERF2             ----- <---------ANAC46                 <----------DOF2  --------->ANAC55(2)<---------MYB52(1)        <---- ----------HVH21                  ===========================bZIP_DOF------>NtERF2<-----------ARR10 ---->ANAC55(2)              --------->ARR14(2)    <---------TGA1a   <-----------HVH21          <---- -----ANAC55(1)              <---------ARR14(2)    --------->ANAC46  <---------RAP2.6(3)        <---- -----ANAC55(2)          --------->ANAC46          ==============================MYC_MYB       <----- -----ANAC58            --------->TOE1(2)          --------->TGA1a  <---------ATERF1(2)        ------ -----ANAC46        <---------MYB52(1)             --------->O2     <---------ANAC46           <----- -----O2           <-----------HVH21               <---------O2     =============MYC_MYB       ------ -----TGA1a       <---------MYB46(3)         ------->PIF5           --------->DEAR3(1)         <----- -----ANAC58    <---------ZAT2<------ZmHOX2a(2)  <---------ALFIN1   --------->ATERF1(2)        ------ ---->O2        --------->ZAT2====================HOX2a_HOX2a       <---------TGA1a<------ZmHOX2a(2) --TEIL         <---------At4g35610          <-------PIF5  <---------ICU4<-------GAMYB       <------- -->CCA1(2)     --------->At4g35610        ------>ZmHOX2a(1)  --------->ARR14(2) <------ZmHOX2a(1)--- >YAB1        <-----------RAV1(2) ============================================bZIP_DOF <<<<<<<<<NAM   gtgtcgtgtcttcgtctcagctgttacccacgatcccttttgttcctcgtgccacgtgacatcatttctgccgtcggttaggaggatcatcccttccacg  6231700    <---------YAB1                                                                                ---   <---------ARR14(2)                                                                            <--- ------>WRKY38(1)                                                                                <--- ====MYC_MYB                                                                                    ----- -->PIF5                                                                                        ----- ---MYC4                                                                                        ----- -->MYC4                                                                                        <---- -->MYC2                                                                                        ----- -->MYC3                                                                                        ----- ---MYC3                                                                                        <---- ---MYC2                                                                                        ----- ---PIF5                                                                                        ----- ----PIF3(3)                                                                                    ----- --->O2                                                                                         ===== ----O2                              <---------ICU4            ====================================== --->PIF3(3)              ----------->GT1                      <----------DOF2       <---------GLK1(1) ----TGA1a                <------MYB46(1)       --------->At5g28300              <---------HSFB2a(2) --->TGA1a                <------MYB83         ----------->GT1 ====================================== --ALFIN1               <---------WOX13(1)     <---------MYB46(3) --------->YAB1 --------->HSFB2a(2) ------>ZAT18         --------->ATHB12     <-----------RAV1(1) ======================================   tggactatccttgtggtactcgatcgattggtaaactaattcttactggtggtaactcttgtaaacttttataagttttttttttggaactcatgtacac  6231800   --------->TGA1a   ========================bZIP_DOF   ========================bZIP_DOF   <---------TGA1a ==========================bZIP_DOF --------->TGA1a <---------O2 --------->O2 <---------TGA1a ==========================bZIP_DOF -------->HVH21 --------HVH21 --------TGA1 ---->ANAC55(1) ---->ANAC55(2) ---->ANAC58 -----TGA1a                                                                              ------>ZmHOX2a(2) ---->bZIP60(2)                                                                         <------ZmHOX2a(2) ---->ANAC46                                                                            --------->GLK1(1) -----O2                <---------AHL20(2)                                             <---------AGP1 ---->O2               <---------YAB1                        --------->AtLEC2          <---------ARR14(2) ---->ANAC58         <---------ICU4                        <---------ANAC58            --------->ARR14(2) ---->TGA1a  <-----------GT1  <---------AtLEC2      <---------MYB52(1)         <---------TOE2(3) ==========================bZIP_DOF                --------->At5g28300         <---------TOE1(3)    - =====bZIP_DOF       --------->YAB1                --------->LBD16    <------MYB46(1) <---------CCA1(2) ==========bZIP_DOF <---------YAB1                ----------->GT1     <------MYB83 <-------TEIL   --- =====bZIP_DOF  <----------DOF2          ---------->DOF2   <---------ANAC58    --------->MYB59  -----   gtcacatgtgagtataaactttattattatttgcataaaactcaaaaggaaaccgtgaatttcatgccaatttggtttgtttaggttcggatctcaaaca  6231900                                                                  --------->TOE2(3)                                                        --------->O2                                                        <---------ANAC58                                                        --------->TGA1a                                                        <---------TGA1a                                                        ============================bZIP_DOF                                                        <---------ANAC58                                   <---------ICU4       <---------O2                             <---     --------->AHL20(1)            --------->YAB1       --------->ANAC55(2)                      <---     <---------AHL20(2)            <-----------RAV1(2)  <---------ANAC46 ---------->DOF2         ----     --------->AHL20(2)         --------->YAB1          ============================bZIP_DOF     ----    <---------AHL20(2)         --------->KAN4(1)   --------->ANAC46     <---------AHL20(2) <------NtERF2    --------->AHL20(2)        <---------KAN4(2)    --------->ANAC58   <---------YAB1     <---------ANAC46 -------->AHL20(2)           --------->YAB1        --------->ANAC58------>ZmHOX2a(1)     <---------DEAR3(1) -------->GT1           <---------ANAC46 <------ZmHOX2a(1)  --------->MYB52(2)      ---------->DOF2 ----->DOF2          <---------ATHB12 <------ZmHOX2a(1) <---------ANAC55(2)       <---------ATHB12  <   aagtaaataatttgcaacgtccaatcgcgtagaataatcaggaggaacaaaacacgagacgtgagtttccttattaaaagcctaatcaaaggcgtcgaat  6232000             --------->MYB46(3)    <---------CCA1(2) ------ARR11(3) ------AHL20(1)                                                                      ----------->GT1 ----->ARR11(3)           ----------->GT1              --------->At4g35610           *TSS ----->AHL20(1)     <<<<<<<<<EIN3               --------->KAN4(2)              --------->ANAC58  ---- -----------GT1------------>CBF               <-------TEIL                     --------->ANAC58 -----   attttcatctcttcaacaacaatgtatagagtatataagaacaacaagttcattctcatctccatccctcgcataactaataagctatggcaaaaaaact  6232100                                                                           <------NtERF2                                                                 ------>NtERF2                                                                 <---------ZAT18                                                                --------->DEAR3(1)              <----                                                               --------->ATERF1(1)             <-----                                                              --------->At4g35610            <-------                                                              <---------At4g35610           <-------GAMYB                                                           <-----------HVH21               <---------MYB46(3)                                                          <-----------RAV1(1)              <---------DEAR3(2)               --------->HSFB2a(2)                     --------->ATHB12    --------->At5g28300 <-----        --------->KAN4(2)                              <---------ICU4     <---------DEAR3(2)<--------    <------MYB83        --------->ATHB12               --------->YAB1     <---------MYB46(3)<------NtERF2    <------MYB46(1)     --------->ATHB51              <---------ATHB12   <---------DEAR3(1)--------->MYB55(2)   --------->MYB59      -------->ATHB1                <------ZmHOX2a(2) <------NtERF2 <---------LBD16 ----->At5g28300       <---------YAB1------->GAMYB    <---------YAB1    <---------ABI4(1) <---------DEAR3(1) ------>GT1    <---------HSFB2a(2)<-----------GT1 ------>ZmHOX2a(2)   <---------DEAR3(1)--------->LBD16   gtaatttggtcattcttctaggggtattattggtattaaccctcttccatgatccgatcattgtcgctgccctcggcggtgagagtaatccggcggtagg  6232200                                                                                                  <--                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                           --------->SPL1(2)                                                                                          --------->SPL1(1)                                                                                          <---------SPL1(1)  <---------ZAT14                                                                        <---------SPL7  <---------ZAT18                                                                      <-------------  --------->ZAT14                                     --------->ANAC58                 -------------- --ZmHOX2a(1)              <---------DREB2C(2)        --------->ANAC58           <----------DOF2 <--- -MYB46(1)                 <---------DEAR3(1)<---------AHL20(2)             ---------->DOF2--------->SPL7 -P   <----------DOF2   --------->WRKY12     --------->AHL20(2)           --------->LBD16<---------RAP2.6(3) -MYB83                 ----------->HVH21 ----------->GT1              ------>ZmHOX2a(1) <---------SPL1(2) -SPL7<---------DAG2  <----------DOF2    ----------->GT1           <---------ARR11(3)----------------   actgttcacttttggagactcttactttgacggtggaaacaaaatgtttaatttgtaagcaaatttcaacatcctccccaaagcttttggccgtacggga  6232300       ----------->HVH21       --------->WRKY12       --------->WRKY38(1)   --------->LBD16                                             ------------>AtMYB77  --------->LBD16                                           <---------ANAC55(2)  --------->ANAC46                                          --------->ANAC58             --------->ANAC55(2) <---------LBD16                       <----------TaMYB80   --------->ANAC55(2)         <---------TOE1(2) --------->TOE1(2)                  <------NtERF2           --------->ANAC58           ------>ZmHOX2a(1) -------ARR14(2)                   ----------->RAV1(1)     --------->SPL7   <---------------AtSPL8 ----->GLK1(1)                     --------->RAP2.6(2)     <-------TEIL<---------ANAC55(2) --->GT1                        ------>NtERF2            <---------MYB52(1) --------------->AtSPL8 --HSFB2a(2)                ----------->HVH21          <---------------AtSPL3         --------->TOE2(2) --AtSPL3        ------->GAMYB --------->ATERF1(2)     --------------->AtSPL8         --------->TOE1(2) ->AtSPL3      --------->SPL7  <---------ATERF1(2)     --------------->AtSPL3  <-----------GT1      < ------GLK1(1)--------->MYB52(1)<---------SPL7    <----------DOF2      --------->ANAC55(2)  ------->TEIL -->SPL14     <---------ALFIN1--------->RAP2.6(3) <---------DAG2      <-------TEIL--------->KAN4(2) <   aatcccgcgatgaccccaacggcaagttttctgacggccgcatagtccctgactttatcggtacgttacagttacatatttgtacattcctacgtactta  6232400                                                           --------->ANAC46                                                           --------->ANAC58                                                           --------->ANAC58                                                       <------ZmHOX2a(2)                                                --------->ETT(2)                                 --------->ARR11(3)   <---------ARR14(2)                         ----                                 <---------ARR11(3)   --------->ARR14(2)                       <-----    <-----------GT1<---------ANAC58           <---------ARR14(2)                             -------- ---------DAG2<---------YAB1 --------->HSFB2a(2)<---------ETT(2)  <---------AHL20(2)        <-------- ----------DOF2    <---------ANAC58           --------->ARR14(2) --------->AHL20(2) <---------MYB52(1)   tacttttttccaacttattatgcgttctcttctaaaatctactatgcatatcgaccgatccacgatataaaattcaaattggaaacggtagtttatgatt  6232500                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                             <---------ARR11(3)                                                                             --------->ARR11(3)                                                                            <---------GLK1(1)                              <---------AHL20(2)  <---------At4g35610       --------->GLK1(1)                         --------->AHL20(2)       --------->At4g35610 --------->LBD16                         <---------AHL20(2)     --------->DAG2       --------->HSFB2a(2) ----->ATHB12            --------->AHL20(1)    ---------->DOF2       <---------ANAC55(2) ----WOX13(1) <---------AHL20(2)        ------>ZmHOX2a(2)            <---------HSFB2a(2) ->ATHB12    <----------DOF2<---------YAB1  --------->YAB1          <---------LBD16                 < -YAB1--------->MYB46(3) <---------AHL20(1)<---------YAB1        <----------DOF2           <---------AHL20(2)   gattactaacaatcgttttattgcaaatttattattttgtgatccatgataaagctgaattcatgggcattccggaagagatcccaccagtatttaaaac  6232600  Previous    Next  AGI:  At1g18120.1    Description:  pseudogene, putative myrosinase-associated protein, blastp match of 46% identity and 1.7e-57 P-value to GP|6522943|emb|CAB62165.1||AJ223307 myrosinase-associated protein {Brassica napus} Range:  from: 6232085    to: 6233919    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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