Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC58              <---------ANAC58              <---------ANAC46                                                                      -         <---------ICU4                                                                           ---       <-----------GT1                                                                            <--      <-----------GT1                                                                             ---     <---------AHL20(2)                      ------->TEIL                         ------->TEIL   <---     --------->AHL20(2)                     <-----------GT1                      <---------AtLEC2---- --------AHL20(2)                     <---------ZAT14                        <---------AtLEC2  ------ ------->AHL20(2)                     --------->ZAT14                     ------->TEIL      ---------   tttaaatttaaacatttcttgaatagagattgtgttcgactgcattgaacctcttagaaatggttttgaagtaatgtatgcatgcatgtttctactataa  6229800                       <------ZmHOX2a(1)                   <---------ANAC46     --------->At5g28300    ----------->GT1<---------bZIP60(2) ---------->TGA1----------->TGA1 ----->HAHB4  --------->YAB1 -------ICU4  <---------ICU4 ------>YAB1 --------->ICU4                  <---------ARR14(2) ------YAB1  <---------YAB1                  --------->ARR14(2) ----->ICU4<---------ICU4                <-------TEIL --->YAB1  --------->YAB1        --------->MYB59                     <-------TEIL >YAB1    <---------ATHB12       <---------TOE2(3)              <---------YAB1  --------->CCA1(2)  --   tgatgacggtaaatcatgatgacgaggaagcatgtaaggtatgtgcatatatacacatatatgtttataaatgcataaatggatatagatgtgagaagat  6229900                                                                   <---------ANAC46                                                                 <---------MYB46(3)                                                                --------->ALFIN1                                                                <---------AtMYB61                                                              <---------ANAC46                                                             <---------DEAR3(1)                                                            <---------LBD16              --------->MYB52(2)                                                            --------->ZAT14            <---------MYB52(1)                                                            <---------ZAT14           <---------RAP2.6(3)                                                     <---------ARR14(2)              <---------MYB46(3)          <---------ZAT6                             --------->ARR14(2)            ------>NtERF2    --------->ANAC46                                ================================HOX2a_HOX2a  --------->CCA1(2)                                 <------ZmHOX2a(1)              <---------At4g35610 <---------ARR14(2)                 <---------ARR11(3)  <---------WRKY18(1)       --------->DEAR3(1) --------->ARR14(2)  --------->At4g35610    <----------DOF2 --------->ZAT18  ------>ZmHOX2a(2)<------ ----->TEIL  ---------->DOF2        --------->ARR11(3)<---------WOX13(1)   --------->ARR11(3) <------   gaatatacgagagtgtaaagctcatcggaatggcccgagatgttgacttttggaggattgactgcggtggagggtttgatctcgcagccgttagtgatgt  6230000                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                              -------                                       ------->TEIL                                           -------                                <------MYB83                                                  -------                                <------MYB46(1)                                               -------                              <---------MYB52(1)                                              -------                              <--------P                                                ------->GAMYB                              --------->ALFIN1                                     <------ZmHOX2a(2)                             <-------GAMYB                                       ====================                            --------->MYB55(2)                                   <------ZmHOX2a(1)                            <---------MYB46(3)                           --------->AtMYB61   --------                            <---------DEAR3(2)                          --------->MYB46(3)   --------       ---------->DOF2     <---------RAP2.6(2)              <------ZmHOX2a(2)---------->DOF2---------    ------>NtERF2          <---------DREB2C(2)              ============================HOX2a_HOX2a   <----------ID1          <---------ANAC46                 <---------ATHB12--------->AtMYB61-------- ---bZIP60(2)              <---------DEAR3(1)    <---------ALFIN1       <---------MYB55(2)  <-------- ---ANAC46               ------------>AtMYB77  ----------->RAV1(1)   <---------ETT(1)----------->RAV1(1)   gtttggggccaaagtagacagacatattggcggttgggatgaacatgtccaacacatctccgatcactcttccgaccaccaaaggatcaacagaagccgc  6230100      --------->At4g35610      <---------LBD16      <---------At4g35610   <------ZmHOX2a(2)  <-----------HVH21 ----->DEAR3(1) --NtERF2 ----RAP2.6(3) >NtERF2 -->RAP2.3(2) -->DEAR3(1) -->RAP2.6(2) -->ANAC46 -->RAP2.3(3)                                                                                 <------ =========HOX2a_HOX2a                                                                         ------- ->RAP2.3(1)       --------->CCA1(2)                             --------->GLK1(2)        ----------- ->ATERF1(1)      --------->ARR11(3)                        ---------->DOF2       ---------->ID1 >At4g35610       <---------ARR11(3)                     <---------AHL20(2)     <-----------RAV1(1) ->ERF1<---------ANAC46                             <---------YAB1   <---------MYB52(1) <---------ARR14(2) -ATERF1(1) --------->ALFIN1                      <-------TEIL  <---------GLK1(2)*TSS <---------TOE1(2)   catcgatcagcggggagggagatatatatagagagagagagaaacagagaggttcttattttaaaagaatcgttgttttgttttgtcgcatgtccgaatt  6230200                                                                                --------->ICU4                                                                                --------->AHL20(2)                                           --------->REM1(1)               --------->ANAC58                                        ------>ZmHOX2a(1)             --------->REM1(1) -------->HAHB4                                 --------->AHL20(2)                  --------->SPL7     <---------ICU4                                 <---------ICU4                    <---------SPL7       --------->YAB1                                --------->AHL20(2)                <---------ANAC58   --------->YAB1                                <---------AHL20(2)                <---------ANAC46  --------->AHL20(2)                                <---------ATHB51                  <---------ANAC58  <---------AHL20(2) ---ARR14(2)                <------ZmHOX2a(1)                    --------------->AtSPL3<---------YAB1 -->ARR14(2)         <-----------TBP<-----------GT1            <-----------RAV1(1) --------->AHL20(2) ------>AGL1<-----------HVH21   --------->ICU4              <-----------GT1--------->ANAC58   cggatgggcatctatgtcatggtttatataggaaataatttccttacatcaagttttttttttttctgtcgtacatcaagaaatatttaataatagcatc  6230300                                                                            --------->AHL20(1)                                                                           <---------ICU4                                                                           <---------AHL20(2)                                                                           --------->ATHB51                                                                           --------->AHL20(2)                                                                          --------->ICU4                                                                      <---------MYB52(1)                               <---------ICU4                        --------->TOE2(3)                              --------->ICU4                        --------->ANAC58                      <-------MYC3                                  --------->ANAC58                      <-------MYC2                             <-----------GT1    <---------TOE2(3) -                      ------->MYC2    ------>ZmHOX2a(1)     --------->AHL20(2) <---------AHL20(2)<---                      ------->MYC3<-----------GT1           <---------AHL20(2) --------->AHL20(2)----           ------->TEIL   <------NtERF2 <----------DOF2    --------->AHL20(2)<---------YAB1      ----        <---------ATHB12<---------DEAR3(1)           <-----------GT1--------->ANAC46      <----------   gacaaatacaatgaatttgaagcacgttggcgataatttcctctttcttcgctattcactatttatttccacgttaattattttaatgtttttttcgaat  6230400   <---------YAB1           --------->ATHB51  --------->AHL20(1)        <---------ICU4                    --------->At5g28300 <---------ICU4             --------->AHL20(2)               ----------->GT1 --------->AHL20(2)         <--------ATHB1                 --------->At4g35610 <---------AHL20(2)        <---------ATHB51      <---------ARR11(3) --------->ATHB51          --------->ICU4        --------->ARR11(3)                            ------ -------->ICU4             <---------ATHB12     --------->CCA1(1)                              <----- ------AHL20(2)          --------->YAB1    --------->ANAC58<---------ZAT2                     <------ ----->AHL20(1)       --------->YAB1       --------->ANAC46--------->ZAT2                  <---------AHL20(1) ----->AHL20(2)    --------->YAB1          --------->ANAC58<---------At4g35610             --------->AHL20(1) -GT1        ----------->GT1<---------AHL20(2)  --------->RVE1(1)                         --------->AHL20(2)   taattattttagtttatgtaaaaataacaataatttagttttcaaacgaaatatctattgcagctgtaaaatgtataagttattaagaagaaatatatat  6230500                              <-----------GT1                         --------->AHL20(2)                         <---------AHL20(2)                        <---------AHL20(2)                              ---------->DOF2           <--                    <---------AHL20(2)                             ---------->DOF2              <----        ------->TEIL--------->AHL20(2)                    <---------ATHB51                      ----- --->ARR11(3)   <---------AHL20(2)       --------->AHL20(1)--------->YAB1                       <---- ----ARR11(3)  <---------AHL20(1)        <---------AHL20(1)--------->AHL20(2)--------->CCA1(2) <----- ---CCA1(2)   <---------CCA1(2)   ----------->GT1         <---------ATHB12----------->GT1  <---------YAB1   cttcgaaatgtatttcatatatttattttaaataacatgttaatattttttatattagcaataatataaaaaagaaaagataaacgaactattacgatgc  6230600                          <---------ANAC58                          <---------ANAC58                                                   <-------                    --------->ARR11(3)                                                     <---------ARR11(3)                    <---------AHL20(1)                                                     <---------AHL20(1)                    --------->AHL20(1)                        <---------AHL20(2)           --------->AHL20(1)                 --------->AHL20(2)          --------->AHL20(2)                            --------->ARR11(3)                 --------->YAB1              <---------AHL20(2)                         --------->AHL20(2)                 <---------AHL20(2)         <---------AHL20(2)--------->AHL20(2)      --------->AHL20(2) -------MYB52(1)<---------YAB1            --------->YAB1<---------AHL20(2)           --------->YAB1 -----ANAC58  --------->YAB1  <---------ANAC58    ----------->GT1                   --------->AHL20(2) ------>GT1  <---------YAB1   <---------ANAC58--------->AHL20(1)                  --------->YAB1 -----ANAC58 <---------AHL20(2)          --------->ICU4--------->AHL20(2) <---------ARR11(3) -------- --TEIL      --------->AHL20(2)<----------DOF2<---------AHL20(2)          --------->ARR11(3)<--------   gttattttgtcatatataattatatattgtttgctttactgcaaaaattattttgtataaaattttaaatgaataagttcttaaaaataaaaatatatct  6230700  Previous    Next  AGI:  At1g18100.1    Description:  E12A11; phosphatidylethanolamine binding. Identical to Protein MOTHER of FT and TF 1 (MFT) [Arabidopsis Thaliana] (GB:Q9XFK7); similar to TFL1 (TERMINAL FLOWER 1), phosphatidylethanolamine binding [Arabidopsis thaliana] (TAIR:AT5G03840.1); similar to MOTHER of FT and TFL1-like protein [Citrus unshiu] (GB:BAF93494.1); contains InterPro domain Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); contains InterPro domain Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858) Range:  from: 6227210    to: 6230181    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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