Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ZAT14       --------->ZAT14      ------>ZmHOX2a(1)    ------>ZmHOX2a(2)   --------->GLK1(2)   <------ZmHOX2a(2)  <---------ARR14(2)  --------->ARR14(2)  --------->ARR11(3)                                                               <--------HAHB4  <---------ARR11(3)                             <-------TEIL                      --------->ATHB51  <---------GLK1(2)                             --------->CCA1(2)                  <---------ICU4  --------->AGP1                               --------->ARR14(2)                  --------->ATHB12 <---------At4g35610                      ----------->RAV1(1)                  <-------TEIL --------HVH21  <----------DOF2      --------->HSFB2a(2)    <----------DOF2 <---------At4g35610 ---->ANAC46--------->ZAT18        ------>ZmHOX2a(1) --------->MYB46(3)     --------->At4g35610 ---ALFIN1  <---------ZAT18   <----------DOF2  <---------ARR14(2) ----------->GT1 --------->ICU4   ttcagatcctgtagtgggctatacagactaccctttcctcgagaccacagatacaacaactgcttaaggggtttattcagatgcattattagcaaaacat  6203900                    --------->DAG2                   ---------->DOF2              ----------->GT1        <---------HSFC1(2)             --------->DAG2          --------->HSFC1(2)                                 <---------ALFIN1            ---------->DOF2         --------->ANAC58                       --------->ZAT6        ----         <---------ANAC55(2)        --------->ANAC58                 <---------ICU4   ------->TEIL       --------->YAB1       --------->TOE2(3)                       <---------YAB1    --------->SPL7      <---------ATHB12 <---------ANAC58                           --------->YAB1    <---------SPL7<--    --------->WOX13(1) <---------ANAC58                          <-------TEIL     --------------->AtSPL8   atttttcaatcacataaggcaaaaagcttgcctcaaacaagcttcggcagtgtccaactctccaagtttcatcatttccactacaacgtaccacctatat  6204000             <------NtERF2             --------->LBD16            --------->ANAC46            --------->ANAC58            --------->ANAC58           <---------LBD16           --------->SPL7         <---------SPL7     <---------ICU4    <---------YAB1------->GAMYB        <---------ANAC58               ----------->GT1  <---------ICU4 --------->MYB46(3)    <---------ANAC58        <---------------AGL15        <--------  --------->YAB1 <---------MYB52(2)    <---------ANAC46        --------------->AGL15       <---------ANAC58 ----->AHL20(2)----------->RAV1(1)<---------ICU4              <-----------------AGL3       <---------ANAC58 -------AHL20(2) <------------MYB.PH3(2)              --------->REM1(1)       ---------->DOF2   aaaatcatcatcgtccgcaacaaactataagttccaaaattgcttacacaaatgcttcaacaaaactaaaattggttatacaaagtcacaaatgctttcg  6204100                                                                                 <-----------GT1                                                                         <---------ZAT6                                                                         ----------->GT1                                                                     --------->ZAT14                                                                     <---------ZAT14   <---------ARR14(2)                                                                  <---------ANAC46  <---------ANAC46                                           <---------YAB1   --------->ATHB12   <---------ICU4    <---                                         --------->YAB1     <--------HAHB4     --------->YAB1   <----                                        <---------YAB1     <---------ATHB12    -------->HAHB4   -----              --------->YAB1           <---------ARR11(3) <---------ARR11(1)  --------->ICU4   ------      --------->ANAC46                 --------->ARR11(3)<---------ARR14(1) --------->YAB1     ------ --DOF2     <---------WOX13(1)  --------->CCA1(2)   --------->MYB52(1) <---------ANAC46--------->ARR14(2)   caaaacttacgccgattgataaacttgcacaaatatacgaatatcatggttaagaaaccgaatcatttatgtgtagtgtaataataccgtatacgaatta  6204200                                  ------>NtERF2                                 <---------PCF2                            <-----------RAV1(1)        <-------TEIL        --------->ALFIN1    <---------TOE2(3)   ---------->DOF2    <---------AHL20(2)              --------->ARR11(3) ------YAB1 <-----------RAV1(2)  --------->TCP15(1)                     <---------AHL20(2) -----AHL20(2)        <---------AHL20(2)   --------->AHL20(2) <---------ANAC58 ---->AHL20(2)       --------->AHL20(2) --------->YAB1    <----------DOF2  <---------AHL20(1) --->AHL20(2) ----------->GT1 --------->ALFIN1        <---------GLK1(2) --------->AHL20(2) --->YAB1   ============================RAV--------->AHL20(1) <---------ANAC58                     <-   aaattcaaggtacttcaggtaaatttaaaagtgtggggcctaaaataaaatatacagaaactttgggtactaaattatatattcttgcaacttgtttgtg  6204300                                               <---------LBD16                                         --------->ATHB12                                         <---------ICU4                                       <---------GLK1(2)                                     --------->ICU4                                    *TSS<---------YAB1                                --------->ANAC58                                --------->ANAC58                                ----------->HVH21                                <---------ETT(1)------>NtERF2                             <----------                               --------->MYB46(3)<------NtERF2                           ------->TEIL                           ----------->HVH21   --------->ETT(1)                       --------->MYB46(3)                           --------->WRKY38(1) <---------ANAC46               <---------ARR14(2)                          --------->At5g28300  --------->LBD16                --------->ARR11(3)    <-----------GT1       <-----------HVH21   <---------LBD16                 --------->ARR14(2)  <---------DAG2        <---------DEAR3(1)    <---------ANAC46                <---------GLK1(2)  <----------DOF2    ----------->HVH21 <---------ARR11(3)   <---------HSFB2a(2)--------->GLK1(2) ----------GT1   <----------DOF2--------->ANAC46--------->LBD16             ----------->ARR10  <-----   tttactttactatctcattctttgcgacggtgacccgacaagattattgccgggaaacagaccgagaagattaagcgtaagattctcaacgaatgttgga  6204400                                              <---------ZAT2                                              --------->At4g35610                                              <---------At4g35610                                           ------->MYC3                                           <-------MYC3                                           <---------LBD16                                           ------->MYC2                           <------------------                                           <-------PIF5                          --------->LBD16                                           ------->PIF5                     ----------->HVH21                                          --------->ANAC58              <------MYB83                                          --------->ANAC46              <------MYB46(1)    <---------At4g35610                   --------->ANAC58             --------->MYB59   --------->GLK1(2)                  --------->ANAC58              --------->ARR14(2)  <---------GLK1(2)                   --------->ANAC58              <---------ARR14(2) -RAV1(1)       <---------ZAT14------>MYB46(1)<------NtERF2        <------ZmHOX2a(1)               <- ----HSFB2a(2)  --------->ZAT14------>MYB83<-------MYC2           ----------->ARR10          --------   gaaggaatctgatttgactgcaatggagaaaccaaataacaagcacgcggctgattcgttttccagcgaggatttggtctcaccggtgaagaaggcaaag  6204500                                          <------MYB83                                          <------MYB46(1)                                        <---------MYB52(1)                   --------->ATERF1(1)<---------MYB46(3)                   <------NtERF2     <------NtERF2                 <---------ANAC46   ------>NtERF2                 <---------DEAR3(1)--------->RAP2.6(2)               ------>NtERF2       --------->DEAR3(1)               --------->LBD16     --------->ANAC46              <---------RAP2.6(2)  --------->RAP2.3(2)              <---------LBD16     --------->MYB46(3)              <---------RAP2.3(2) --------->ERF1             <---------LBD16      --------->ATERF1(1)          --------->GLK1(1)       --------->RAP2.3(1)          <---------GLK1(1)       --------->DEAR3(2)      <------ZmHOX2a(1)          <---------At4g35610   --------->At4g35610    --------->GLK1(2)                                                         -   <---------At4g35610<------ZmHOX2a(1)<-------GAMYB                                                < ---WRI1 <---------HSFC1(2)  <---------REM1(1)                   --------->CCA1(2)                  - ----------HVH21<---------LBD16  <---------ATERF1(1)     <------NtERF2                   ---------->DOF2 -->DOF2 --------->HSFC1(2)--------->At4g35610        <---------LBD16      <----------DOF2      <----   aagtcagaggaggtttccggcggaggagaagctgtagccgccgttggtaatagagaggcggaagaagataagcctagctttgtaagtgaagaaaagaagg  6204600                                                                         <---------SPL7                                                                       <---------AtLEC2                                                                       ----------->RAV1(2)                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                 ----------------------->TaNAC69(2)                                                                <---------MYB46(3)                                                                <------MYB83                <-----------RAV1(1)                             <------MYB46(1)           --------->At4g35610                                 <---------AtMYB61           <---------At4g35610                               <---------ANAC58                 -------           <---------ZAT2                                    <---------ANAC58           --------->GLK1(1) -------->ARR14(2)           ---------->DOF2                 <---------ANAC46           <---------GLK1(1) ---------ARR14(2)  --------->At4g35610                     <---------MYB46(3)    <----------DOF2 -------->GLK1(2)   <---------At4g35610               --------->ARR11(3) ----------->HVH21   <------- --ZmHOX2a(1)   <---------REM1(1)                     <---------ARR11(3) ----------->TGA1   <--------   agtttctggtcgaagctgatgttgctgaagacaaaggagctagacatactatggaagatgtttgggtggttttgcctgacgcttctttggatttcccagg  6204700                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ------->TEIL                                                                                         --------->ANAC58                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC58                                                                                         --------->ANAC55(2)                                                                                        <-------TEIL                                                                                       --------->CCA1(2)                                                                                       --------->ARR14(1)                                                             <-----------RAV1(1)      --------->TOE1(2)                                                         <---------YAB1               --------->ARR11(1)     ----------->GT1<---------ARR11(3)                  <-----------------AGL3        --------->ARR14(2)    <---------TOE2(3)                                   <-----------------AGL2        <---------ARR14(2)    <---------TOE1(3)                                   ============================================= -->LBD16           --------->ARR11(3)                --------->GLK1(2)             ----------->ARR10 --LBD16          --------->ANAC58                   <---------GLK1(2)            <------ZmHOX2a(1) -LBD16           --------->ANAC58         --------->ATHB12<---------MYB52(1)   --------->MYB59<-----   gacactaaggtaacaaatacaagctcttagttgaatcaagtttagtaattggacacattctgtttgtgggacttagaagaattaggaagatacgaatctt  6204800  Previous    Next  AGI:  At1g18020.1    Description:  12-oxophytodienoate reductase, putative. Identical to Putative 12-oxophytodienoate reductase-like protein 2 [Arabidopsis Thaliana] (GB:Q9C5W1;GB:Q9LDU9); similar to 12-oxophytodienoate reductase, putative [Arabidopsis thaliana] (TAIR:AT1G17990.1); similar to LEDI-5c protein [Lithospermum erythrorhizon] (GB:BAD06575.1); contains InterPro domain NADH:flavin oxidoreductase/NADH oxidase, N-terminal; (InterPro:IPR001155); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 6202265    to: 6203911    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g18030.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT2G25620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68120.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 6204336    to: 6206981    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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