Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------YAB1                                                                      --------->ICU4                                                                 <---------MYB46(3)                 -                                     --------->AHL20(2)      --------->ATHB12                       <                           <---------WOX13(1)                <---------AHL20(2)                     <          <---------AHL20(2)     <---------AHL20(2)       <---------ICU4          ----------->GT1   - <---------HSFB2a(2)  ---------->DOF2<---------AHL20(2)  --------->ICU4       <---------AHL20(2)  --- --------->HSFB2a(2)--------->HSFB2a(2)             --------->ANAC55(2)  <---------YAB1         >>>>> ------AHL20(2)     <---------HSFB2a(2)   <---------AHL20(1)<---------YAB1  <---------TOE2(3)<-------   tttttagaagaaaaaattgtttctaaaagattgattttttttaatatgttttttatgtaatatttattggttattattaatgaattgtaagttttaagaa  6199500      <-----------GT1     <-----------GT1                                           <-----------GT1    --------->AHL20(2)                                      --------->YAB1    <---------AHL20(2)                                  <---------AHL20(2) <---------ICU4                                        <---------AHL20(1) -------->AHL20(2)        --------->YAB1               --------->AHL20(1) ---------ATHB51   --------->AHL20(2)               <---------AHL20(2) ---------AHL20(2) <---------AHL20(2)           --------->AHL20(2) -------->ICU4    <---------AHL20(2)            --------->AHL20(1) ------>YAB1      --------->AHL20(2)            <---------AHL20(2) >>>>>GT-3b   --------->AHL20(2)               --------->AHL20(2)            <-----------GT1 --TOE2(3)    <---------AHL20(2)  ----------->GT1   --------->AHL20(2)<---------AHL20(2)<----------DOF2   aaataattaaacatttttaatttaaaaatcagaaaattgtaaaatacaaaaaaattatatatttataactattttttagtaacatgttttcttttatgtt  6199600                                                                                 <---------ANAC46                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                              ----------->TGA1                                         <---------WRKY12                   <---------ICU4                                <---------MYB46(3)                          --------->YAB1                              <---------ANAC58                             --------->ICU4              <---------------AtSPL8   <-----------HVH21                  --------->AHL20(1)         ------->GAMYB        <---------ANAC58                           --------->YAB1      --------->MYB52(1)      <-------GAMYB                          --------->HSFB2a(2)          <--      ----------->RAV1(1)    <---------MYB46(3)                      <---------HSFB2a(2) <----------DOF2   tttctaaacaacagagggagtactagttttttggttgtcagtgtcaacgtgaagaagtagctattgtttttctaaaaataatgacgtttgacttttattt  6199700            --------->MYB52(1)         --------->ANAC55(2)         <---------ANAC55(2)                                <---------ZAT14         --------->ANAC58   ----------->HVH21         <-----------GT1         --------->ANAC58  <---------WOX13(1)      <---------ICU4   ---------->DOF2       --------->ATHB12---------->ID1     --------->ZAT14 -------ANAC46          <-------TEIL  <----------DOF2<---------YAB1<------ZmHOX2a(1)        ---------   tcgtagaaagaacgtaacagataacattcattgacatgttcttttcgctctagttattacagtttactaggattagattaaaccagtagagagcatcaat  6199800                                                                               --------->MYB52(1)                                                                              ------->GAMYB                                                             ---------->DOF2 --------->MYB46(3)                                                    --------->At4g35610    --------->MYB52(1)                                                    <---------At4g35610 --------->YAB1                                 <---------AHL20(2) <------NtERF2     --------->GLK1(2)       <------                              <---------ICU4       --------->ANAC46  <---------GLK1(2)     *TSS --->CBF         <---------TOE2(3)                --------->ZAT18---------->DOF2     <------ZmHOX2a(2)   tttgttttgttagaaaattaagttttagttaatatttattcccatgaaaatgtccgctactactaaagaaagaatcgtaacagacggatcacaaacagtc  6199900                                                                         ------->TEIL   ------>ZmHOX2a(2)                                                  <---------YAB1                <  --------->CCA1(2)                   <---------YAB1<-----------GT1 --------->YAB1               <---  <------ZmHOX2a(2)                  --------->AHL20(2)      <-----------GT1       <---------O2 <---- --------->ARR14(2)                  <---------AHL20(2)    <---------AHL20(2)    --------->CCA1(2)  < <---------ARR14(2)               ----------->GT1--------->TOE2(3) <------ZmHOX2a(2)   ----------->GT1 --------->AGP1          <---------HSFB2a(2)     <----------DOF2   <---------ATHB12<---------TGA1a <- -----HVH21              --------->HSFB2a(2)     ============================================bZIP_DOF   acagatccgagccctgttttgagtttacgagaagaatattaaaattctcatctttaaccattttatccgatcatgaatgtgagagacgagggaaaaacta  6200000                                                                                <----------DOF2                                                                              <---------At4g35610                                                                              --------->At4g35610             <---------ANAC46                                               --------->ZAT18             <---------DEAR3(1)                                             <---------ZAT18    <-----          --------->ANAC46                                               <---------TGA1a       ------  <------NtERF2                                                          <---------O2         <------ --------->LBD16       <------ZmHOX2a(1)                        ------>ZmHOX2a(1)         <-------TEIL ---------ANAC46      ----------->GT1                  <---------AHL20(2)--------->O2   --------->ARR14(2) ------DEAR3(1)<------NtERF2         --------->LBD16   --------->AHL20(2)============================ -----LBD16 <---------LBD16  <---------AHL20(2)       --------->AHL20(2) --------->TGA1a<---------ARR14(2) ---------DEAR3(1)<------ZmHOX2a(1)<---------LBD16   ==============================bZIP_DOF  <------- --------LBD16 --------->ATERF1(1)--------->MYB52(1) <----------DOF2     ==================bZIP_DOF   cggcggagaaacacggcggaggagaggagaataaatcaccggagaacaaatggcgatttaattctcctctagctcaagtgagcttaatgggattcgtttg  6200100                                                        --------->AGP1                                                        <---------ARR14(2)                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                             --------->ALFIN1                                             <---------AtMYB61       <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                           <---------DEAR4(2)      <---------At4g35610                                          <---------DREB2C(2)   <---------At4g35610                                          <---------DEAR3(1)   ------->GAMYB                                          --------->ALFIN1    <------------AtMYB77                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->LBD16                 <---------ABI4(1)    <---------MYB55(2)        <---------LBD16        ------>NtERF2<-------GAMYB     --------->MYB46(3)     ------>NtERF2  <-------GAMYB   <---------WRKY12       --------->ATERF1(1) ------>MYB83            --------->ABI4(1) <-----------RAV1(1)  ------->GAMYB      <------NtERF2  --------->ARR14(2) --------->ANAC58         x ----MYB46(3) <---------HSFB2a(1)       <---------ATERF1(1)  -------->P --------->MYB46(3)   <------- --->MYB52(2) --------->KAN4(1)--------->LBD16  --------->WRKY18(1)--------->At4g35610 <---------ANAC46 ---TOE1(2)  <---------KAN4(2)--------->ANAC46<---------MYB46(3)--------->At4g35610 --------->DEAR3(1) =========MYC_MYB <---------WRKY38(1)  <---------DEAR3(1)    ------>MYB46(1)     <---------ALFIN1  <- --MYB52(1)<------ZmHOX2a(1) <---------LBD16<------NtERF2<------ZmHOX2a(2) --------->ANAC58  --------   tttctgttgtccaggaatgttcaacgctctctccggcatgggaggcggtggtcaagtagatccaaccgctgctaacaacgctaacaccgccgtttacacc  6200200                         --------->ATERF1(1)                         <---------LBD16                        ------>NtERF2                        <---------ATERF1(1)                        <---------RAP2.6(1)                        <---------RAP2.3(1)                        <---------ORA47(2)                                                          =                        <---------RRTF1(1)                                                          -                        <---------ERF1                        --------->MYB52(2)                    <                        <---------DEAR4(2)                  <---------MYB52(1)                      -                       <---------RAP2.3(2)                <---------O2                            <--                       --------->ATERF1(2)                --------->TGA1a                         ---                       <---------RAP2.6(2)                --------->O2                            <--                       <---------RAP2.3(3)                <---------TGA1a                         <--                       <---------ATERF1(2)                --------->ANAC58                        <--                       <---------RRTF1(3)                 --------->ANAC46                        <--                       <---------RRTF1(2)                 --------->ANAC58                        ---             ------>NtERF2                         --------->ANAC58                              <---             ---------->ID1 <------NtERF2          --------->ANAC58                              <---        --------->ARR14(2) ------>NtERF2           --------->ANAC46                             -----       <---------MYB52(1)<------NtERF2            <---------LBD16                             <------    <-----------------AGL1 <---------MYB46(3)    <---------ALFIN1                            ------>NtERF2   <---------At5g28300 <---------DREB2C(2)      <---------ETT(2)                   <---------ANAC58<-  <-----------GT1      <---------DEAR3(1)       <---------WRKY38(1)                --------->ANAC55(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             --------->ETT(2)                   <---------ANAC55(2) ----GT1<---------ARR14(2)<---------ANAC46    <-----------HVH21<---------At4g35610 <---------ANAC58== ---------DOF2  <----------DOF2            ------>ZmHOX2a(1)--------->DOF5.7(2)   --------------->AtSPL3 ->ANAC46  <---------RAP2.6(2)   <-----------GT1<---------WRKY12  --------->At4g35610       ---------   gctttcaccgttttcggccttttaggcggcgggttttacaacgtcctcggtccacggctcacgttagccgctggatgttcgacttacgtactctacgccg  6200300                                                                         --------->LBD16                                                                        <------NtERF2                                                                        --------->ATERF1(1)                                                                       ------>NtERF2      ------>ZmHOX2a(1)                                                <---------LBD16 <----------DOF2                                                      --------->ALFIN1 ============HOX2a_HOX2a                                              <---------ANAC46 ----->ZmHOX2a(2)                                                    ------>NtERF2 ---------HSFB2a(1)                                                  --------->ATERF1(1) -------->HSFB2a(1)            --------->ANAC58                      <------NtERF2 -------AGP1                   ------>MYB83                         <---------RRTF1(1) ------>ARR14(2)             <---------ALFIN1                       <---------RAP2.3(1) -------ARR14(2)             --------->AtMYB61                     <---------ANAC46 -------ARR11(3)          <---------ALFIN1                         <---------RAP2.6(2)            --- -------ARR11(1)          --------->AtMYB61            <----------DOF2--------->DEAR3(1)          <-- ---------ARR10        --------->ANAC46            <------NtERF2   <---------RRTF1(3)             <-- ------>ARR11(3)       <---------ALFIN1           --------->LBD16  <---------ANAC58               --- ------ARR14(1)        --------->AtMYB61         --------->DEAR3(1)<---------ANAC58       <------NtERF2 ------CCA1(2)        --------->MYB46(3)        <---------LBD16    <---------DEAR3(1)    --------->LBD16 ---->LBD16      --------->YAB1--------->ANAC58 <------NtERF2      <---------RAP2.3(2)   <------NtERF2 ---LBD16        ------->GAMYB ------>MYB46(1)  --------->ATERF1(1)<---------RRTF1(2)    xxxxxxxxxxxx -----ZmHOX2a(2) --------->AtMYB61    <---------HSFB2a(2)          <---------RAP2.3(3)  <---------ANAC46 ============HOX2a_HOX2a --------->MYB46(3)   <---------DEAR3(1)  <---------LBD16      <---------LBD16 >ANAC46        --------->MYB46(3)    --------->HSFB2a(2)      <-------GAMYB   <---------ZAT14  <----   gatctttcctctactacaaccatcaccaccaccaagccttcgcgatagtcgccggagctttactcggttgcggcgcgggacttctctgggccggagaagg  6200400  Previous    Next  AGI:  At1g18010.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G18000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48549.1); contains InterPro domain Protein of unknown function DUF895, eukaryotic (InterPro:IPR010291); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 6199891    to: 6201477    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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