Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 <---                                                                                           ==========                                                                                           ==========                                                                                           <---------ANAC58                                                                                           --------->ANAC55(2)                                                                              ---------->DOF2  <-----                                                                       ----------->GT1     <---------ANAC58                                                                   <-----------HVH21       <---------ANAC46                                                                  ----------->HVH21        --------->TGA1a                                                                <---------ANAC58           <---------TGA1a                                           <---------WOX13(1)   <---------ANAC58           <---------O2                                         --------->ATHB12       ----------->RAV1(2)    <------ZmHOX2a(1)                                       <---------WOX13(1)      -------->P--------->WRKY18(1)   <-----                                    <---------YAB1             ======================================MYC_MYB                                    <---------TOE2(3)         <-----------GT1 =======================bZIP_DOF   ccaagttgttcgatttaagacgaagataaatccagattgagattgattgaaactgcgttactacttacctgtccggtcaaaatagcagaggagacgtgct  6168400                                             --------------->AGL15         ---------->DOF2                    <-----------------AGL2    <---------ANAC58              ------->MYC3    <---------ANAC58              <-------MYC3    <---------ANAC46             <---------ANAC58 ------>ARR11(3)                 <---------ANAC58 ------CCA1(2)                   <---------ANAC46         --------->ANAC58 ===================bZIP_DOF---------->CDC5<---------At4g35610           <---------YAB1 ======================================MYC_MYB            --------->ANAC58 ----------->GT1       ---- ----ANAC58                ------>ZmHOX2a(1)<-----------------AGL3<---------TOE1(3)     <------ZmHOX2a(2) ----ANAC58  <------ZmHOX2a(1)   >>>>>>>>CAMTA3  <---------ICU4   <---------TOE2(3)--------->ANAC46--   tatcttgctcgtaaaggacgggcatggtcctcaacgcgtggttttatctgataatggcactcgaaattagggtttatgagtaaaaacgcgatcacttcga  6168500               <---------MYB52(1)       <------MYB46(1)       <------MYB83     <---------WOX13(1)   --------->ATHB12   <---------ICU4   -------->ATHB1                                              --------->ANAC55(2)   --------->YAB1                                          <----------DOF2   <--------ATHB1                                     ------>MYB46(1)  <---------YAB1                                      ------>MYB83  --------->ICU4                                 <-----------GT1  <---------ATHB12       --------->YAB1    ----------->GT1 <---------DAG2 ----->ANAC46<---------ANAC46      <-----------GT1  <---------MYB59 ---------->ATHB5        <---------ICU4--------->GLK1(2)--------->ZAT6   cacaatgattggtttccgtttatacaaacatcacaaataacattctggttataacctaacactttacgagattacatcgcgataaatctaggtgaaattt  6168600                                                             --------->DEAR3(2)                                <-------TEIL        <---------YAB1              --------->At5g28300                  <------ZmHOX2a(1)  --------->WOX13(1) <---------------AtSPL8 ----------->GT1                <---------------AtSPL8          --------->TOE1(3)            --------->At4g35610            ---------->DOF2 <---------TOE2(3)   --------->TOE2(3)       <-----------GT1             -      <---------YAB1        <---------TOE1(3)   <----------DOF2      <---------ICU4           -------   caacgattacgatagaaagaggaacaatttagggttcatcaatctcttaactttaaaattggtacagaccagaattaccagcggtaagaagaacatatgt  6168700                                                                                                 ----                                                                                                 <---                                                             <---------ANAC46                    ----                  <---------YAB1                <------ZmHOX2a(2)                               <----                 <-----------------AGL1    <------ZmHOX2a(1) <---------ANAC58              ------>ZmHOX2a(2)                 ====================================================================================             --------->At4g35610   <-----------RAV1(2) <---------TOE2(3)                  <------ZmHOX2a(2)          ---------->DOF2    --------->ANAC58  <---------ARR11(3)                  <---------ZAT14      --------->MYB52(1)     --------->ANAC58  --------->ARR11(3)                  --------->ZAT14 -------->YAB1   <-----------------AG--------->At4g35610     <---------ANAC58     --------->ALFIN1 -->ANAC55(2)<---------At4g35610  ----------------->AGL1  <--------P             >>>>>>>>>TAC1 ------   aatcaacataacgaaagcttacgattttggaacgaaaccagatgaggaagatcgaacaaggttgcttcgaagaaatttgagacagtgttgagatcgctgc  6168800                             --------->AHL20(2)                        --------->At5g28300                    <---------MYB46(3)                  <---------MYB52(1)                  <-------GAMYB                 --------->LBD16               <---------LBD16               <-----------------AG                                           --------->ATHB12 ----->LBD16   <-----------------AGL1                                        <-------TEIL ------ZAT14 --------->GLK1(2)--------->AHL20(2)                         --------->AHL20(2) ----->ZAT14 <---------ARR14(2)                      <----------DOF2     <---------AHL20(2) -----ANAC46 --------->ARR14(2) *TSS --------->AHL20(2) <-----------GT1 --------->AHL20(2)        <-- ================================MADS_MADS        <-----------GT1     --------->TOE2(3)      <------- >NtERF2<---------ZAT14----------->GT1        <----------DOF2    <---------AHL20(2)       --------->ICU4   gcagagagagtgaagaatccggttgtggtaaataaaaaaaaaaatcgtctttttacttttacatcatttattcattaaattcattagatgtaattttgat  6168900                                                             --------->AtLEC2                                                           --------->YAB1                                             --------->ARR14(2)             <---------RVE1(1)                                             <---------ARR14(2)             <---------CCA1(1)                                            <---------HSFC1(2)             --------->ARR11(3)                                            --------->HSFC1(2)             <---------ARR11(3)      --                               <---------ANAC46  <---------ANAC46    --------->AHL20(2)        ------     <-----------GT1  --------->ANAC46      <---------HSFB2a(1)      <---------AHL20(2)   --------->AHL20(2) -------AHL20(2)   --------->AHL20(1)   ----------->GT1 <----------DOF2   --------->YAB1  <---------AHL20(2) --YAB1  <----------DOF2    <----------DOF2 --------->HSFB2a(1)      <---------YAB1      <---------AHL20(2)   ataattttaaacttttacaaatatactaaacttttgtgtaaatggaaaattcggtgttctttcatgaaaatataaatgatattttttatattttaaataa  6169000            --------->ICU4       <------MYB46(1)       ----------->GT1        --------->TOE2(3)       <------MYB83      <---------At5g28300      --------->MYB59   <-----------GT1 <----------DOF2           ---------->DOF2 --------->GT1  <-----------GT1 --------->ATHB12               ---------->DOF2             --------->ZAT18 --->MYB52(1)<---------ICU4   <----------DOF2     <-----------HVH21            ---------->DOF2   ctggtaatttggtaagaattacaaatttacagccttattggactttcccttgagtcagagagtttcaaagaagcactgtctaaaagcagagagcgaaccg  6169100                ------>ZmHOX2a(1)             <------ZmHOX2a(2)            --------->ARR14(2)            --------->ARR11(3)            <---------ARR14(2)           ------->GAMYB          --------->MYB46(3)         <---------TOE2(3)                      --------->GLK1(2)        --------->MYB52(1)          <---------ARR11(3)        <-----------GT1             --------->ARR11(3)    ------->TEIL<-----------RAV1(1)--------->REM1(1) ===================HOX2a_HOX2a  ----------->RAV1(1)  <----------DOF2     <---------ZAT18 ------>ZmHOX2a(1) <---------MYB46(3)          <---------GLK1(2)    <----------DOF2    <---------GLK1(2)   gtcctgaatctaacgatcctgttgttgtctgaatgcaacatcttctctagattctgcttttattctaaaacttttgtgcaattttctctgattcttcaag  6169200                                                                                     <----------DOF2                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                            ------>NtERF2                                                                            ----------->RAV1(1)                                                                           --------->ANAC46                             --------->TOE2(3)                             <---------ALFIN1                           -------->P                                     --------->MYB46(3)                        <---------At4g35610                          <---------ARR14(2)                        --------->At4g35610                          --------->ARR14(2)           <--                       --------->ANAC46                             <---------At4g35610           <--                    --------->TOE2(3)            <-----------GT1    --------->At4g35610        <-----   ctccaaactaaaccttctcttacctcagcaacctcattcaccaagaacattatacactctctcagaagtcagaacccccaccatttgcttttgcatatta  6169300  Previous    Next  AGI:  At1g17930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41085.1); contains InterPro domain Protein of unknown function DUF1723 (InterPro:IPR013541) Range:  from: 6166213    to: 6168832    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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