Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------ZAT2                  <---------At4g35610                  --------->At4g35610               <---------At4g35610         ------>MYB83--------->ZAT2         ------>MYB46(1)                                                               ==============       --------->DEAR4(1)                                                              <------ZmHOX2a(2)       ------->GAMYB --------->At4g35610                                      <---------ANAC58       --------->DEAR3(1)                                                 <---------WOX13(1)       --------->DREB2C(2)                                              --------->ATHB12      --------->DEAR3(2)                                               <---------YAB1--------->At4g35610 ------>TEIL   --------->At4g35610                             <-------TEIL   <---------ANAC58 ----AtLEC2<----------DOF2<------ZmHOX2a(1)          ---------->DOF2<---------ARR11(3)--------->ARR11(3)   tgaatcccaccgactttagcagcagctaggatgacataaactggtttctctgtagcaaagaaagattcaacatctgattggctagtgagatcaagctctg  6155300                                                                  ------>MYB83                                                                  --------->ARR14(2)                <                                              ------>NtERF2     --------->AtMYB61                  <-                                             --------->LBD16   --------->MYB46(3)                  --                                            <---------ANAC46   <---------ATHB12                 <----                                            <---------ANAC58   <---------MYB55(2)              <-----                                            <---------ANAC58  -------->P                   ------>ZmHOX2a(2)                                           <---------LBD16    ------>MYB83                <------ZmHOX2a(2)                                        <---------ANAC58      --------->ANAC46           --------->ARR14(3)                                        <---------ANAC58      ------>MYB46(1)            <-----------ARR10                                       --------->ZAT2    <---------ARR11(3)              <---------ARR14(3)                                       <---------At4g35610<------ZmHOX2a(2)              <---------AGP1                                   ==============================HOX2a_HOX2a             --------->ARR11(3)                   ----------->GT1 ------>ZmHOX2a(1)     <-----------ARR10               --------->AGP1               ------>MYB83      ----------->RAV1(2)     --------->AGP1                  <---------ARR14(2)               ------>MYB46(1)   ------>ZmHOX2a(2)       <---------ARR14(2)              <---------ARR11(3)             <---------MYB59   --------->ARR14(2)        --------->ARR14(2)              --------->ARR14(2)            ----------------->AGL1<---------LBD16       --------->GLK1(1)              ----------->ARR10          ==============================HOX2a_HOX2a     --------->At4g35610          ---------->DOF2-          <------ZmHOX2a(1)----------->RAV1(2)<<<<<<<<<<<<<<<<<LFY------>MYB46(1) ----------->RAV1(1) ================HOX2a_HOX2a   <---------ARR14(2)       <---------At4g35610      ----------->HVH21<--   aatgggttcgaaggaccaaattggtgaaaccctgatcctggagcttgcggacaatggcagatccaaccaatcccctatgtccagcgacaaagatcttggc  6155400         --------->YAB1                                                                --------->TOE2(3) ---------GLK1(1)                                                                    <---------ARR11(3) --------ARR14(2)                                                                    --------->GLK1(2) ------->ARR14(2)                                            --------->STY1(1)       --------->ARR11(3) -----ANAC46                         --------->ANAC46        <---------STY1(1)  --------->ANAC58 ----LBD16--------->TOE2(3)       --------->ZAT14         --------->ARR11(3)    --------->ANAC46 -------->GLK1(1) ------->TEIL    <---------ZAT14     ---------->DOF2           --------->ANAC58 ----NtERF2    <---------MYB52(2) <---------REM1(2) <------ZmHOX2a(2)          --------->LBD16   ggatttctctaacataaacgaacctgatttcatctctgcacagaattacgagggatcaaagacctagggttccaaaatttccacgaaaatctaaattcaa  6155500                                                                                 ------>NtERF2                                                                                 <------NtERF2                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                                                   <---------GLK1(2)                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                  <---------ARR14(1)                                                                 --------->LBD16 --------->LBD16                                                               <---------LBD16  --------->ANAC46             <---------ARR14(2)            --------->AHL20(2) --------->MYB52(1)--------->ANAC58             --------->ARR14(2)<---------AHL20(2)             ------->TEIL   <---------SPL7           --------->LBD16     --------->AHL20(1)           <---------SPL7--------->ZAT14          <---------ANAC46     <---------AHL20(1)         --------------->AtSPL3--------->ANAC58  --------->ANAC46            --------->AHL20(2)          ------->TEIL   <-----------RAV1(1) --------->LBD16            --------->TOE2(3)        --------->CCA1(2) ------>ZmHOX2a(1)       ------   ttccacaaaactccgtatatagacatgaaacattatattcagacataaaatagagagatggacgtaccggatcctgtgttgtccgccattgtttagtcaa  6155600                                                                           --------->HSFC1(2)                                                                           <---------HSFC1(2)                                                                    ------->GAMYB                                                                <---------WRKY12               ------                                                                <---------WRKY38(1)           -------                                                --------->CCA1(2)   ----------->RAV1(1)      <-------                                                <---------GLK1(1)  --------->MYB46(3)        <-------                                               --------->ARR11(3)  --------->ANAC46        ----------    <---------HSFB2a(2)          <---------ARR14(2)             <---------WRKY45        <------MYB46(1)    --------->HSFB2a(2) <---------TOE2(3)      <---------ARR11(3)<---------DOF5.7(2)    <------MYB83 --->WOX13(1)<----------CDC5     --------->ARR14(2)      <---------HSFB2a(2)   ----------->ARR10   ttagttctacaagacgatgagcgattgagaatggggattttgacttatagatatcagttttcgaagtcaacgacagaagcttagatttgtaggtaaaggt  6155700                                           ------>NtERF2                                           <---------ATERF1(1)                                          --------->ATERF1(2)                                          <---------DEAR3(1)                                         --------->ERF1                                         --------->ATERF1(1)                                         <---------LBD16                                         --------->RAP2.3(1)                                         --------->ORA47(2)                                        --------->LBD16                                        <---------ATERF1(1)                                        ------>NtERF2                                      --------->MYB46(3)                                    --------->KAN4(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                                    --------->ARR14(2)                                   <---------GLK1(1)                              ------>ZmHOX2a(2)                             --------->At4g35610                             <------ZmHOX2a(2)                             --------->CCA1(2)                            <---------ARR11(3)                            --------->ARR14(2)  <------ZmHOX2a(2)                            <---------ARR14(3)  --------->At4g35610                            --------->ARR11(3) <---------ARR14(2)--------->GLK1(1)                            --------->AGP1--------->RAP2.3(2)    <---------CCA1(1)                            <---------AGP1--------->DEAR3(1)    <---------ARR14(2)                            <---------ARR14(2) --------->ARR14(2)<---------RVE1(1)                           <---------GLK1(1) *TSS------>ZmHOX2a(2)    <---------ANAC58       --------->GLK1(1)<------NtERF2       --------->ARR14(2)         ------>ZmHOX2a(1)    <---------ANAC58      ----------->ARR10--------->LBD16   --------->ETT(1)            ------>ZmHOX2a(2)    <---------ANAC46     ==============================HOX2a_HOX2a                       ----------->RAV1(2) ----->GT1               <------ZmHOX2a(1)<---------ATERF1(2)<---------ANAC46           <------ZmHOX2a(2) ---->GT1                ===============================HOX2a_HOX2a                    --------->ARR11(3) --TOE2(3)             <---------ANAC46--------->ANAC46     <------NtERF2              <---------ARR14(2) --TOE1(3)          --------->ALFIN1<---------ARR14(2)     <-----------HVH21           ------->TEIL >DOF2            <---------ANAC46---------->TaMYB80      --------->ALFIN1             --------->ARR14(2)   taaattccttggagaatgtaatgtggaggagatctgaatatccgccggcgatctgaatcggtgtcggatattttgttattcagtttatggatcctggccc  6155800                     --------->ZAT14                   <---------At4g35610                        --------->MYB52(2)              <------                   --------->O2                              --------->ATHB12               ---------                   --------->bZIP60(2)                    <---------ANAC55(2)             ------>MYB83                 <-----------GT1                          --------->ANAC55(2)             ------>MYB46(1)         <---------AHL20(2)   ------>NtERF2            <---------MYB52(1)               <---------MYB59         --------->AHL20(1)   --------->LBD16<----------DOF2<---------MYB52(1)      --------->LBD16         --------->AHL20(2)  --------->DEAR3(1)      <---------ICU4             <-----------GT1  <---   <---------MYB59 --------->At4g35610       <---------DAG2--------->TOE2(3)  --------->AHL20(2)-----   atgggcctaaataaaatagtcacctcactctccgcccatttcgcttacttttccatcgttacgttattggcctattgcaattaaaccggaccaaattccg  6155900                                         --------------->AtSPL8                                         --------------->AtSPL3                                      --------->ALFIN1                                    --------->TGA1a                                    <---------ZAT2  --------->SPL7                <---------AHL20(2)    --------->ZAT2                  <---------O2  --------->LBD16                 --------->AHL20(2)    <---------ZAT2                  --------->ZAT2<---------SPL7          --------->ARR14(2)    --------->At4g35610             --------->At4g35610                   <---------ARR14(2)    <---------At4g35610--------->At4g35610 <---------SPL7         <---------------AtSPL8 ---LBD16         ------>MYB46(1)   <---------At4g35610 ------>MYB46(1)   <---------GLK1(2) >GLK1(2)         ------>MYB83      --------->O2--------------->AtSPL8 <---------ANAC55(2) ------MYB52(1) <---------MYB59   <-----------RAV1(2)   ------>MYB83   --------->ANAC55(2)          < ---->LBD16  <-----------GT1<-----------HVH21--------->SPL7       <---------------AtSPL3          <--   gttcgcagctgtgagttaccaaattagctccatcagccaggtgtccgtactccgtaccatccataagaagagtacggattcgaataaaatataagcctag  6156000              ----------->HVH21            ----------->GT1   <---------ANAC46   <------MYB83   <------MYB46(1)                                                                        <----------DOF2  <---------AtMYB61                                                                   <---------GLK1(2)  --------->MYB46(2)                                                            --------->ANAC58  <---------MYB46(3)                                                            <----------ID1 ------ ---------ANAC46                      --------->AHL20(2)                        --------->ANAC58 -------MYB46(3)      --------->TOE2(3)        --------->TOE2(3)                --------->ANAC46 <---   tggtttggtgaagactgtgacaaacctttagaagactcaaataaacaaacattagcctagtggagcatttttgcgatagaagacgacacattctttttca  6156100                                                --------->MYB52(2)                                                --------->MYB46(2)                                                --------->MYB111(1)                --------->At4g35610                                                --------->MYB111(2)            <---------MYB46(3)                                                <---------MYB46(3)      --------->DEAR3(1)                                               <--------P               ----------->HVH21                                             ------------>MYB.PH3(2)    --------->ETT(2)       <---------WOX13(1)             --------->ANAC58                  <---------ETT(2)     --------->ATHB12                 --------->ANAC58                  --------->MYB46(3)    <---------YAB1                --------->ANAC46               ----------->HVH21 <---------At4g35610 --->YAB1                         --------->ANAC58       <---------ATHB51------>NtERF2 ------YAB1      ----------->GT1  --------->ANAC58 <-----------GT1  --------->DEAR3(2)   tcatcgatgattggatgagatgtgattttcaaacacaagcaagtaagtggtagttacaaattatgcagtgaccgacgaccgtggatgctgaagtccaagg  6156200  Previous    Next  AGI:  At1g17890.1    Description:  GER2; catalytic. Identical to Putative GDP-L-fucose synthase 2 (GER2) [Arabidopsis Thaliana] (GB:Q9LMU0;GB:Q3EDA2;GB:Q3EDA3); similar to ATFX/GER1 (GDP-4-KETO-6-DEOXYMANNOSE-3,5-EPIMERASE-4-REDUCTASE 1), GDP-L-fucose synthase [Arabidopsis thaliana] (TAIR:AT1G73250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66600.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 6154261    to: 6155745    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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