Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ANAC58                         <---------HSFB2a(2)                 <---------ANAC46             <---------ARR14(2)         <-------GAMYB                        --------->ARR14(2) <----------ID1      <---------ANAC46          --------->ARR11(3)        --------->LBD16   --------->TOE2(2)            --------->AHL20(1)        --------->HSFB2a(2)   --------->TOE1(2)            <---------ARR11(3)        ------>ZmHOX2a(1)  ----------->RAV1(2)          --------->CCA1(2)         <---------LBD16  <---------HSFB2a(1)         --------->ARR11(3)      --------->ARR14(2) --------->GLK1(2)            <---------ARR11(3)      <---------ARR14(2)        ---------->DOF2 ---------GLK1(2)<---------ANAC58          --------->TOE2(1)     --------->ANAC58 -------->ARR14(2)          <---------TOE2(3)<---------CCA1(2)   --------->ANAC46     <-------TEIL  - ---------ARR14(2)     --------->ATHB12    --------->TOE1(1)     --------->ANAC58    --------->CCA1(2)   cagaacctgcgcgttgattccttgttcattgagatatattcgacctcgtatattcaaatcctggaatacgaaaaaccattgaaaaagattcaaattttaa  6148400                           ------->TEIL                 --------->ARR14(2)                 <-----------ARR10                                          --------->MYB52(1)                 <---------ARR14(2)                                      ---------->DOF2<---------TOE2(3)                 --------->GLK1(2)                            <-----------GT1    ------->TEIL       < --------->DOF2 <---------GLK1(2)------->TEIL  --------->ANAC46   --------->GLK1(2) <----------DOF2--   accaaagagaacatttcagaatctacatgtatatgaattttggtttttcaaacaacttgacaattcacattctgtaaaagacggacctttaagaatgaga  6148500                              <---------WOX13(1)                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                       <---------GLK1(1)                       --------->GLK1(1)                      --------->ARR11(3)                      <-----------ARR10                      <---------ARR14(3)                      --------->ARR14(3)                      <---------ARR11(3)                                                  --------->ANAC46                      --------->ARR14(2)                                    <-----------HVH21 <---------ANAC58     <---------ARR14(2)                                    <-----------TGA1 <------- <---------ANAC58    <------ZmHOX2a(1)                                   ------>ZmHOX2a(1)--------->ANAC55(2) -------TEIL         <---------GLK1(2)                          <---------ARR11(3)        <---------ANAC55(2) ------->ALFIN1   <-----------RAV1(2)                           --------->ARR11(3)      <---------ANAC46   ggtgcttctcaatctcagcctcaggatctccgattgatacaaaccgatagaagttaacaacaatgaaatcttctccttcgtcatcgaatttcgcgtaacc  6148600                      <-----------RAV1(2)                      ===============================RAV             --------->ANAC55(2)             --------->ANAC58                                                           <---------YAB1             <---------RAP2.6(2)                                                     --------->GLK1(2)             --------->ANAC58                 <------MYB83                           <-----------ARR10             <---------ANAC55(2)              ----------->GT1                 <------NtERF2            <---------At5g28300               <------MYB46(1)               <---------LBD16            <---------LBD16                 <---------ANAC46                --------->ETT(1)          <---------MYB52(1)                <--------P                  <---------AtMYB61         <-----------HVH21               <-----------RAV1(1)      <---------ARR11(3) --------->ARR14(2)      ------>ZmHOX2a(1)  <------ZmHOX2a(1) <---------MYB52(1)     --------->ARR11(3) <---------ARR14(2) --ARR14(2) --------->RAP2.6(3)  <-------TEIL<---------MYB46(3)<------ZmHOX2a(1)    <---------GLK1(1)   atttcttcctctgttacggcatttgcaggagaaggtccatcttctggtgggtttaaactctgagaggagatgttttggtcgggagcaaatctgattactc  6148700                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              <------NtERF2                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             ------>NtERF2                                                                                             <-------                              <------NtERF2                      <---------ANAC46           ---------                             --------->LBD16     <---------TOE2(3)                          ---------                            --------->DEAR3(1)   <---------TOE1(3)      ---------->DOF2     <--------                           <---------LBD16      <---------DOF5.7(2)    <---------WRKY45    --------->ATERF1(1)                     <---------MYB46(3)         ---------->DOF2<---------ZAT18             <---------RAP2.6(2)               --------->ANAC58             <---------MYB46(3) --------->ZAT14             --------->RAP2.3(1)               --------->ANAC58   --------->CCA1(2)            <---------ZAT14        --------->ALFIN1  --------->ARR11(3)<---------ATHB12     <----------DOF2       --------->ZAT18        <-----------RAV1(1)   aaaacatattgtttgagtcgcaatggttcgccggagaaacgagctttggttaaagttataggtagtggagtagtcaaagagactgagagtgttgccgccg  6148800       --------->YAB1      <---------YAB1 ---NtERF2 ----->RAP2.3(1) -----ATERF1(1) ->NtERF2 ---->LBD16 --->DEAR3(1) --->RAP2.3(2)                                                         <---------ANAC58 ----ATERF1(2)                                                         <---------ANAC46 ----DEAR3(1)                                                          <---------ANAC58 --->ATERF1(2)                                                 ------>ZmHOX2a(2) -->ATERF1(1)                                                 <---------RVE1(1) -->RAP2.3(1)                                                 <------ZmHOX2a(2) -->RAP2.6(1)            ----------->GT1                     --------->ARR14(3) ---LBD16               --------->ALFIN1                     <---------ARR14(2) -->ORA47(2)         --------->LBD16         <----------DOF2 --------->ARR11(3) -->DEAR4(2)         <---------MYB46(3)    *TSS  <----------DOF2<----------DOF2 -->ERF1            <---------ANAC46    <------NtERF2        --------->ARR14(2) --ATERF1(1)        <---------ANAC58  --------->ANAC58       <---------ARR14(3) --RAP2.3(1)        <---------ANAC58  --------->ANAC58       <---------ARR11(3)                 ----- >DEAR3(1)         <---------LBD16   --------->RAP2.6(3)    --------->RVE1(1)  ------>NtERF2    ----- >ATERF1(2)<---------ARR11(3)       --------->CCA1(2)    ---------->DOF2<---------SPL7        ------- -ATERF1(2)--------->ARR11(3)  ---------->DOF2   --------->TOE2(3)  <-----------RAV1(1) ------------>CBF   gcgaaactctcattatcttctcgcgggtggagaaaaagagacggcatctttctttaatctaaagatctttatgtcgtatgaggccttaagcccaattcaa  6148900                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                    --------->AHL20(2)                                          --------->AHL20(1)                                        <       ---------->ID1                     --------->ARR11(3)            <---------ZAT14             < ---->ANAC58         --------->CCA1(2)    <---------ARR11(3)       <---------ANAC46      --------->AHL20(2) ---->ANAC58       --------->YAB1         <---------AHL20(1)    <----------DOF2          <---------AHL20(2) --->DOF2         <---------TOE2(3)    --------->AHL20(2)       --------->TOE2(3)       --------->AHL20(2)   gcccagtttgtcttatagctaagataagaagagattagtaagaaaatattccaaatttatatcaaactttagtgtatactattctggctatttaattcga  6149000                                                               --------->MYB46(3)         ----------->GT1                                   <---------YAB1   ---------->DOF2        <- <<<<<<<<<RAP2.2                  <-----------GT1        <-----------GT1  <---------ATHB12   <------- ---------TOE2(3)    --------->ARR11(3)         --------->ARR14(2)      --------->WOX13(1) <--------- ---------YAB1       <---------ARR11(3)         <---------ARR14(2)     <---------WRKY38(1) <---------   tttagattggattgttatattaagaccttatctaatttacatttagacagtatccagttttatcatccactagtcaatgaaagggacatttttcgtcagg  6149100                                                                 --------->ICU4                                                             ------->GAMYB                                                            --------->ANAC46                                                         <---------WRKY12             <---------O2                             --------->ANAC55(1)             --------->bZIP60(1)                      ===============MYC_MYB             <---------ANAC46                         --------->TGA1a             --------->TGA2(1)                        --------->ANAC58             --------->O2 --------->WRKY38(1)         <---------ANAC55(2)             <---------bZIP60(1)                      --------->ANAC46             <---------TGA2(1)                        --------->bZIP60(2)             <---------bZIP60(2)     --------->AHL20(1) --------->DOF5.7(2)             >>>>>>>>>>HY5--------->WRKY45            --------->O2   --------->YAB1           <---------TGA2(2)         <---------AHL20(1)<-----------HVH21   ------>ZmHOX2a(2)    ========================================bZIP_DOF --------AtMYB61        <----------DOF2 <---------AHL20(2)<---------DOF5.7(2) ----RAV1(2)----------->STF1        --------->AHL20(2)--------->ANAC58                              - --HVH21  ----------->TGA1--------->WRKY12            <---------O2--------->YAB1 --------->AtMYB61 -- --TGA1   ----------->HVH21<---------WRKY18(1)      <---------ALFIN1<---------YAB1      --------->AHL20(2)   ggtgatcgaaatatgacgtcgtcaagctttgaccacaaatatataaacatatcaacacgtcaacgaaattatcatatgctcgaccacaaactaaataata  6149200                                                           <---------YAB1                                                  --------->ARR14(2)                                                  <---------MYB52(1)                           <----------DOF2   --------->ARR14(2)                       <-------TEIL          <---------ARR14(2)            --------->TOE2(3)    <----------DOF2  <---------ARR14(2)                          *TSS         <-----------GT1 ------->TEIL        <-----------GT1        --------->GLK1(2)   ------------>CBF -------->DEAR3(1)  <---------At4g35610     <---------CCA1(2)      <---------GLK1(1) <----------DOF2 ------->ANAC46     --------->At4g35610<----------DOF2<---------At4g35610        <---------CCA1(2)   caccgagcatttaaccaaaatcagatgcactttgactttgacttttgtatccgttctgcttattaatagaaatctgttttctcatctcttttcaattcat  6149300  Previous    Next  AGI:  At1g17850.1    Description:  similar to rhodanese-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G40760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48450.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 6146067    to: 6148843    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g17860.1    Description:  trypsin and protease inhibitor family protein / Kunitz family protein. similar to trypsin and protease inhibitor family protein / Kunitz family protein [Arabidopsis thaliana] (TAIR:AT1G73260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65022.1); contains InterPro domain Kunitz inhibitor ST1-like (InterPro:IPR011065); contains InterPro domain Proteinase inhibitor I3, Kunitz legume; (InterPro:IPR002160) Range:  from: 6149294    to: 6150031    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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