Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->HSFB2a(2)                          <---------HSFB2a(2)                          <---------LBD16                      <---------ARR14(2)                                                <------------                      <---------GLK1(2)                                                 -------------                      --------->ARR14(2)                                               --------------                    --------->LBD16                                                    --------------              --------->WRKY12                                                         --------------              ----------->HVH21                                                        --------------            <----------DOF2                    --------->ANAC46<----------DOF2    --------->ATHB12 --------->ANAC58 <---------LBD16         --------->YAB1       <---------DAG2     <---------ICU4 --------->ANAC58<---------ANAC46----------->GT1      ----------->GT1            <---------YAB1   aaccagcaaaaatgctttgacgcggattctcggaagcgaaacaaaaatcacaccaattgaaaaaacttttttttttttttttgatcattgccaatagaag  6138000                                    --------->AHL20(2)       ---------->DOF2                   <----- ---AGL15                        --------->YAB1 --------->TOE2(2)                              ------ -->AGL15                       <---------YAB1 ----------->RAV1(2)                            ------- --->AGL3                      <---------ARR11(3)      ---------->DOF2                 ============== --->AGL1                      --------->ARR11(3)   --------->YAB1                     <---------At4g35610 --->AGL2                     --------->RVE1(1)<---------ANAC58         <---------ARR14(2)    <------ --->AG    <---------MYB52(1) --------->CCA1(1)<---------ANAC58     <------ZmHOX2a(1)  ------>ZmHOX2a(1)   aaacttagaaacagttagtagttttttaaaaaatatcataaaatagattacctgtgataaagagaaagaaggaggttttggagtgattcctctgagaaat  6138100                              <---------ICU4                       <---------DEAR3(1)                       --------->DEAR3(1)                    <---------ANAC58      <---------ALFIN1                <---------HSFB2a(1)    <---------ALFIN1   <---------TOE2(3)<---------ANAC46   --------->AtMYB61   <---------TOE1(3)<---------ANAC58   --------->DEAR3(1)  <---------ALFIN1 ----ARR11(3)   --------->HSFB2a(1)   --------->MYB46(3)   --------->AtMYB61 --->ARR11(3)   --------->HSFC1(2)  --------->AtMYB61   --------->ANAC46 -->GLK1(1)     <---------HSFC1(2) --------->MYB46(3)   <---------ALFIN1                     -------- ==================HOX2a_HOX2a--------->YAB1           --------->MYB46(3)   --------->At4g35610 ---GLK1(1) ------>ZmHOX2a(2)--------->ICU4  <---------GLK1(2)        --------->ICU4     <-----------GT1   ctttcaaggtttgatcggagtttcgtcgacgatgatgaccaccaccacattctctctcccaccatctctctaaatattagatgactatattaaacagctt  6138200                               --------->ARR11(3) --------------->AGL15         --------->DAG2                               <---------ARR11(3) <---------------AGL15        ---------->DOF2                  ---------->DOF2             --------->ZAT18      <----------DOF2                 <---------AHL20(2)           --------->ZAT14   <---------ARR11(3)                <-- ->At4g35610     --------->AHL20(2)           <---------ZAT14   --------->ARR11(3) --------->ALFIN1   aggctctctcttagaaaatttaaagaaaaacaagaactcgtagatgagtttactgaatttagatgaaatcttttaggggaagaaagtggtagcaaggttt  6138300                                             ------------------------>ANAC81                                            ---------->DOF2                                   --------->ATHB12                                   --------->ATHB51                                   <---------ICU4                                <---------AHL20(2)    ----------->GT1        <---------GLK1(2)                  --------->ATHB12<---------YAB1---------->DOF2          ---------->DOF2   <---------TOE1(3)    <---------ANAC58  --------->ANAC58             --------->AtMYB61          <--   <---------TOE2(3)    <---------ANAC58  --------->ANAC58         --------->ANAC58       ----------- -------AtLEC2   <---------YAB1--------->AHL20(2)   ---------->DOF2--------->ANAC58       ------>ZmHOX2a(1)   gaatgaaggtttttggagtatgatttgcttctatttattattgcaagaaagaaagaaagaaaaacgaacacgaccaaaagcttctctctctcctctggct  6138400                                                                  --------->ARR14(2)                                               <---------AHL20(2) <---------ARR11(3)                                             --------->ANAC58     <---------ARR11(1)                                             ----------->GT1      --------->ARR11(3)                                             --------->ANAC58     <-----------ARR10                                             --------->ANAC55(2)  <---------ARR14(2)                                             <---------ANAC55(2) <---------CCA1(2)                                           <--------P      --------->WRKY12                          <----------DOF2 <---------MYB52(1)<-----------GT1      <----------DOF2    *TSS  <---------AHL20(2)          --------->WRKY38(1) --------DOF2      --------->YAB1        ----------->GT1 <------------CBF             xxxxxxxxxxxxxxx >RAV1(2)   <-----------GT1   <---------AHL20(2)      ------------>CBF    <----------DOF2   ctttctctcttttttcacttatcgtaatcttttttattttgtctggtaagtaatttagcaattgaccatatctctccttttgtccaaaaaaaaaaaaaaa  6138500                                                 <---------MYB52(1)                                                --------->TOE2(3)                                                --------->TOE1(3)      ----------->GT1                                       ------>ZmHOX2a(2)               <------MYB46(1)                                     <-----------ARR10                 <---------ANAC55(2)               <----------DOF2       <---------ARR11(3)                <------MYB83       <---------ARR14(2)            --------->ARR14(2)                --------->ANAC55(2)       <---------ARR11(3)            --------->AGP1                   --------->MYB59       --------->ARR11(3)            --------->ARR14(3)               --------->MYB111(1)       <---------ARR11(1)            <---------ARR14(2)              <---------MYB55(1)     <--------       <-----------ARR10             <---------ARR14(3)             <---------MYB52(1)      <--------       --------->ARR14(2)            --------->ARR11(3)             <<<<<<<<<MYB98         --------->ARR11(3)      <---------CCA1(2)        <----------DOF2 ----------->GT1 <----------DOF2         <---------MYB52(1) <-----------GT1       <----------DOF2<------ZmHOX2a(2)     <-----------GT1       <-----------GT1 --- xxxxx>smallRNA(le3)  <------------------------ANAC81  <----------DOF2--------->MYB46(2)   <---------ARR11(3)   aaaaaaccatatctctcctttctctctttccctctttaagatcttcttatcgttaatcttttttacttttgttaggtaactaattttccattagatattt  6138600                                                                      <----------DOF2                              --------->YAB1                     ---------->DOF2                              -------->HAHB4               <---------ARR14(2) -CCA1(1)                     <---------ICU4               --------->ARR14(2)                    <--- -RVE1(1)                  --------->YAB1                  --------->GLK1(2)                  ------- ------->DOF2    --------->YAB1                           <---------ARR14(2)  <---------AHL20(2) ----   caaagtgagcatgttttaaaaataaactctaataataccaagtttgtttcaaatttagaagaatcggcaaagctttgtattttttttgttcgtgaaatga  6138700                                    <---------YAB1               ---------->DOF2     --------->ARR11(3)                                          ------         <---------AHL20(1)        <---------ARR11(3)                                         <------         --------->AHL20(1)        <---------AHL20(1)                                        <-------         <---------AHL20(2)        --------->AHL20(1)                                       ---------        --------->YAB1   ----------->GT1                         <----------DOF2            <--------        --------->AHL20(2)       <---------AHL20(1)             <---------DAG2        <<<<<<<<<GATA-1 ------bZIP60(1) --------->ANAC58--------->AHL20(1)           ------->TEIL           <-----------GT1 -->ICU4<---------AHL20(2)       --------->ARR11(3)          <-----------GT1    <---------AHL20(2) ----->bZIP60(1) --------->ANAC58<---------ARR11(3)    <---------YAB1           --------->AHL20(2)   tgtcaacaaattatattcaaagcaaaatggctaaaaatatttttgttgtcagtttttaaaattgaaccttttctgttcacatttatttatctatttatca  6138800                                                                                            <--------                  ----------->GT1                                                           <-------- --->YAB1       <---------ICU4                                                              <-------- ---YAB1     <---------ICU4                                                     --------->At4g35610 ----GT1     --------->YAB1                                                     <---------At4g35610 >YAB1      <---------ATHB12                                           <---------ETT(2)    <---------TOE2(3) ---GT1   --------->WOX13(1)       ---------->DOF2 --------->YAB1      --------->ETT(2)<----------DOF2   ttttctcattttcaatcatcatgttataaaacaaaaccaaagaaatttgatatttataaacatatatgatatgtcgatatatagctgaactttgacgttt  6138900  Previous    Next  AGI:  At1g17830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G73210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45300.1); contains InterPro domain Protein of unknown function DUF789 (InterPro:IPR008507) Range:  from: 6135796    to: 6138425    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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