Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------ANAC58           <---------YAB1           <---------AHL20(2)      <---------ANAC58                                                              ----------->GT1      <---------ANAC46                           --------->ARR11(3)                <---------TOE2(2) -------->ATHB12     <---------ANAC58            <---------ARR11(3)                <---------TOE1(3) ------TEIL--------->AHL20(2)          --------->GLK1(2)                   --------->ICU4      <----- ----YAB1 --------->AHL20(2)     <---------YAB1 --------->GLK1(1)      --------->TOE2(3)   <---------AHL20(2) -->AHL20(2)   <---------ICU4<----------DOF2  --------->YAB1          ----------->GT1     <---------AHL20(1) ---AHL20(2)  --------->ICU4 <---------DAG2  <---------ATHB12         <---------ANAC55(2) --------->AHL20(1) ->YAB1  <----------DOF2  <-----------GT1   <---------TOE2(3) --------->ZAT18      <---------TOE2(3) -YAB1<---------ANAC58<----------DOF2<---------AHL20(2)       --------->At4g35610  <---------TOE1(2)   attcatttgcgttttaattagtagcttttcactttataaataatctaatgatatctagtttatgtgctcaaaacgtaaatattcttaggttatatatttt  6129600                          <---------GLK1(2)                     <---------REM1(1)                  <---------ATHB12                  --------->ICU4                 <---------TOE2(3)                            --------->YAB1            --------->ARR11(3)                            --------->ICU4         --------->AHL20(2)         <----------DOF2----------->GT1     <---------ARR11(3)         <---------AHL20(2)--------->GLK1(2)      --------->DAG2       --------->ARR11(3)   ---------      --------->YAB1 <---------ANAC46            ---------->DOF2 <-----------GT1            <-------- ------GT1  <---------ARR11(3)     --------->MYB52(2)     --------->AHL20(2)       ------->TEIL   <--   ctgttctaaaataaaatctaatgatgtagaatctcgttctttgtaatcaacaaaagtgaaatatttataacaagttcttagattgaatctgtcttaaatt  6129700                                                                            --------->TOE1(2)                                                                          <---------YAB1                                                                         <---------ARR11(3)       --------->ANAC58                                                  --------->ARR11(3)       --------->ANAC58                                              <---------ICU4     ---------->DOF2                                                 <---------AHL20(2)       ------- >AHL20(2)                           --------->YAB1                 --------->ICU4          <-------- -AHL20(2)                        <----------DOF2                   --------->AHL20(2)<---------RVE1(1) -------YAB1             <----------DOF2--------->YAB1         ----------->GT1     ------>ZmHOX2a(2)   atcaaactaaagcaagttttagtctctcttttttttctttcataatattcgttcttaccaaaaacttgtaataaatatcatgggatcgatattttgactc  6129800                                                                                         <-------MYC3                                 =======================HOX2a_HOX2a                      ------->MYC2                                 <------ZmHOX2a(1)      <-------TEIL                     <-------MYC2    ----------->HVH21     ----------->HVH21            --------->CCA1(2)       <---------O2       ---   =====================================HOX2a_HOX2a <---------YAB1             --------->O2<-------TEIL   ------>ZmHOX2a(2)      ----------->TGA1  <---------LBD16                  <---------ALFIN1    ----  <------ZmHOX2a(2)    <---------AHL20(2)  --------->MYB52(1)               ------>ZmHOX2a(2)    <--- --------->ARR11(3)   <---------AHL20(2)  --------->ARR14(2)          <---------ANAC58   ------->MYC3 <---------ARR11(3)   --------->AHL20(2)  <---------ARR14(2)          <---------ANAC46<---------ALFIN1 -->ZAT6      <----------ID1 <---------bZIP60(2) <------ZmHOX2a(2)    <---------ANAC58--------->ANAC58 ---GT1     ---------->DOF2  <---------ANAC46 --------->LBD16    ----------->GT1      --------->ANAC58   tacgatctcacatggaaagacaaaataaatgacgaggaaaacagaaaccggatcaagattcagagaattgtgacttgatccacttggcacacatgcatag  6129900                                                                      <---------------AGL15                                                                     --------->TOE2(3)                                                                     --------->YAB1                                                              <------------CBF                                                            --------->ARR11(3)                                                           <-----------TBP                                                       <---------ANAC46                                                       <---------ANAC55(2) ---------->DOF2 ------>CCA1(2)                                 <------------CBF   ------->TEIL                     < ----->ARR11(3)                          --------->ANAC46 ------->TEIL--------------->AGL15      ---- ------ARR11(3)               <-------TEIL    <---------YAB1--------->AHL20(1)                 <-----   atatatagtcacagcatggatagtagtatacatacacatttacacagtaccattgttatgtatatattgaatcttaataaaggaactgtccagattgaat  6130000                                         ------->MYC2                                         <-------PIF5                                         <-------MYC2                                         <-------MYC4                                         ------->PIF5                                         ------->MYC4                                         ------->MYC3                                         <-------MYC3                                        <---------O2                                        --------->ANAC55(2)                                        --------->O2            <---------TOE2(3)           --------->TGA1a            --------->ANAC58            <---------TGA1a         ================================HOX2a_HOX2a         <------ZmHOX2a(2)            <---------ALFIN1        --------->ARR11(3)           ------>ZmHOX2a(2)        <---------ARR11(3)          <------ZmHOX2a(2)    ==============================================MYC_MYB                             <---------ANAC58    <--------P                     --------->ARR14(2)                                 <---------ANAC58  ----------->GT1                  <---------ARR14(2)                              <---------WOX13(1)  <---------ANAC55(2)              <---------ARR11(3)           <---------CCA1(2)<---------ICU4  <--- -----------RAV1(2)        --------->ANAC58     --------->At4g35610    --------->At4g35610   <------- ----->YAB1 --------->ANAC58      <------ZmHOX2a(1)           --------->YAB1    ------>ZmHOX2a(1)<--- ----WOX13(1)     *TSS     --------->ANAC58     <---------At4g35610    <---------At4g35610<---------ALFIN1   gatcaggtaagatcaaggaatagatagacacgaacaggatccacgtgttcagcttcagacactctcatatcacatctgtctcctaattgcttccactttg  6130100       <---------At4g35610                                                               <---------TOE2(3)     <-----------GT1                                                       ------>ZmHOX2a(1) <----------DOF2                                                         ------>ZmHOX2a(2)----------- ------ANAC58                         <----------DOF2           <---------TOE1(3)  --------->AHL20(2) ---DOF2                             <---------DAG2  <----------DOF2 ----------->ARR10   <---------TOE1(3) ------ANAC58                  <------------------------ANAC81  <---------TOE2(3) --------->AHL20(2)   cttcttttaagctctctctcttcaagtcttcttctcttgccttttcttccttcttctttatccattaaggtttgatcctctcacttaaattagggttata  6130200                                          <---------TGA1a                                          <---------bZIP60(2)                                          --------->O2                                          ====================================bZIP_DOF                                          <---------O2                                       ----------->TGA1                                       ----------->HVH21                                     <---------ZAT2                              <---------LBD16                           --------->ARR11(1)                                                   -----                           <---------GLK1(2)                                                    <----                           <---------ARR14(2)                                                   <----                       ------->MYC3  --------->ZAT2    <---------LBD16                  <---------ANAC58            <---------HSFB2a(2)      --------->At4g35610   --------->SPL7      <---------At4g35610<--            --------->HSFB2a(2)<---------HSFB2a(2) ----------->HVH21       <----------DOF2      -----       <---------At4g35610 --------->ARR14(2)   ------>NtERF2      ---------->DOF2    --------->GLK1(2) >GT1--------->REM1(1) <-------MYC3  <---------At4g35610 --------->LBD16<---------ALFIN1<---------ANAC58   tatggctacatctgctagaagagcatatggattcgggagagctgacgaggcgactcacccggactccattagagccactttggctgagtttctttccacg  6130300                                                                                          --------->AHL20(1)                                                                                          <---------ARR11(3)                                                                                          --------->ARR11(3)                                                                                         --------->AHL20(2)                                                                                       --------->AHL20(2)                                                                                  --------->LBD16                                                                            --------->ARR14(2)                                                                            <---------ARR14(2)                                                                            <---------ARR11(3)                                                                            --------->KAN4(2)                                                                            --------->ARR11(3)                                                                           <---------HSFB2a(1)                                                                           --------->GLK1(1)                                                                           <---------GLK1(1)                                                                           --------->HSFB2a(1)                                                                           <----------TaMYB80 -->MYC3                                                                   <---------KAN4(1) ---MYC2                                   --------->MYB52(2)              --------->KAN4(1) ---MYC3     <---------ANAC58            <--------P                       <---------KAN4(2)   <------ -----TEIL   <---------ANAC58      <----------DOF2              <-----------HVH21--------->ANAC46 -->MYC2 <----------DOF2       ------>ZmHOX2a(1)         <-------TEIL     ---------->TaMYB80 <-------   ttcgtcttcgtctttgctggagaaggctcaatcctcgctctaggttagtagtttatacatacatagggtcatagggaatatccccccaaaaatatataca  6130400                     <---------ICU4   <---------At4g35610    <---------ANAC58   --------->At4g35610<----------DOF2                      --------->ZAT18                  <-------- -TEIL        <---------MYB52(1)                           <---------ZAT18                  --------- ----GT1    <---------ZAT6<---------ANAC58          --------->ZAT6            ------>ZmHOX2a(1) <----   ttttcagctatatactgttagcatctttacttgagagagtattagtcaaaacaaacactagtactctagtagtatagctcctacacaaacttatttatat  6130500  Previous    Next  AGI:  At1g17800.1    Description:  plastocyanin-like domain-containing protein. similar to ARPN (PLANTACYANIN), copper ion binding [Arabidopsis thaliana] (TAIR:AT2G02850.1); similar to plantacyanin [Lycopersicon esculentum] (GB:AAF66243.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 6128816    to: 6129501    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g17810.1    Description:  BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN); water channel. Identical to Probable aquaporin TIP3-2 (TIP3-2) [Arabidopsis Thaliana] (GB:O22588;GB:Q0WPM9); similar to ALPHA-TIP/TIP3,1 (ALPHA-TONOPLAST INTRINSIC PROTEIN), water channel [Arabidopsis thaliana] (TAIR:AT1G73190.1); similar to membrane protein MP28 - cucurbit (GB:T10253); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 6130018    to: 6131620    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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