Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                             <---------YAB1                                                                         --------->ARR14(3)                                                                         --------->ARR14(2)                                                                         --------->AGP1                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                                                         <---------ARR14(3)                                                                 --------->CCA1(2)                ---                                                                <---------ARR14(2)<---------AHL20(2)                               <---------------AtSPL8      ----------->RAV1(1)--------->ATHB12    <--                               --------------->AtSPL8     ----------->HVH21------>ZmHOX2a(2)     <---                               --------->DAG2             --------->ANAC46<------ZmHOX2a(2)    <-----                              ---------->DOF2        --------->ZAT14     <---------ARR14(2) <--------                       ----------->GT1              <---------ZAT6      --------->GLK1(1)   ---------              <---------ARR14(2)              --------->GLK1(2) --------->ARR14(2)--------->AHL20(2) ----GT1      --------->ARR14(2)      ----------->GT1<---------ZAT14    <---------GLK1(1)   <--------   atttttgttttatgtgaatatggttttgttaataaagtactagttaaaattctagtgtagacgacagataccagagatcttgattaaattccaatatata  6106200    <---------YAB1 ------>ICU4 -------YAB1 --------->AHL20(2) ------TOE2(3)         ---------->DOF2                                   <----------DOF2 ----AHL20(2)<---------AHL20(2)            ----------->GT1             --------->HSFC1(2) -AHL20(1) --------->CCA1(2)        <------ZmHOX2a(1)                  <---------HSFC1(2) >AHL20(1)--------->ARR11(3)  --------->ZAT6                <---------ANAC58 -ARR11(3)<---------ARR11(3)--------->MYB52(1)              <---------ANAC58           --------->At4g35610   atgtttatgaaagatttaaatctaacaaagtaacagtaggatgaaatgtcaatagaaaattagcgtccaaagaagctttctcttgaataagctaagaaaa  6106300                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        --------->ANAC46                                                                        --------->ANAC58                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                            --------->ANAC55(1) ---------            ----------->GT1 --------->ANAC58                        --------->CCA1(2)       <------NtERF2   ------->MYC3     <---------AHL20(2)         --------->ICU4  ---------->DOF2            <---------ETT(2)   <-------MYC3 --------->ICU4           --------->LBD16   <----------ID1                 --------->RAP2.6(2)   caaaacgtggaaaatggaatatttaaaaccacgaaacagtctccgagtagtaatggaaatagcgagaaagaaacacgaaacagcgttgaaggtcgccaat  6106400             ------------>CBF           <-------TEIL                                                      ========================        <------MYB46(1)                           ----------------------->TaNAC69(2)       --------->MYB111(1)                        <----------DOF2            ------>ZmHOX2a(2)       --------->MYB46(2)                       <----------DOF2   ------>MYB83       --------->MYB59                      --------->ZAT18       ------>MYB46(1)  --------->DAG2             <---------ZAT6 <---------ZAT18     <---------MYB46(2)          --------- ---------->DOF2     ----------->TGA1   --------->DAG2          <---------MYB111(2)     <---------AHL20(2) --->CBF<------MYB83 ----------->HVH21 ---------->DOF2         --------->ANAC46         <---------ATHB51   tcgtaaagttaggttcacaatctctgacgaagagttaaccaaaaagcgcgctctttttctctctcaccaaactcatcgatcgtttcttaaataatgcaat  6106500                    --------->GLK1(1)                                                        --------                    <---------GLK1(1)                                                   <---------ANAC58                   --------->ARR14(2)                      --------->LBD16              <---------ANAC58                   <---------GLK1(2)                       ------>NtERF2            <-------GAMYB       --------->ZAT6                                     --------->ANAC46         <---------MYB46(3)     <-----------HVH21                                   <---------LBD16           --------->MYB55(2)    ------>ZmHOX2a(1)               ---------->DOF2     <-----------GT1            --------->MYB111(2) ==========HOX2a_HOX2a   <----------DOF2               <-----------GT1            <--------P<-------- --->CBF           <---------ARR14(2)          <----------DOF2             <-------TEIL <---------ANAC46   ctgttcctgtcactaaatccagataccctttcaaatccaaaagctctctcttttttttttccgcctctcattctgggttcaagggttgttgagtgaggtt  6106600  --------->TOE2(2)  <---------SPL7  --------->TOE1(2)                               <------ZmHOX2a(1) <---------ANAC55(2)                    --------->TOE2(3)                      <----------DOF2 --->GT1                        --------->At4g35610              --------->ANAC46 -TOE2(3)                       <---------At4g35610 --------->GLK1(2)  <-----------GT1    <----------DOF2   actacgtacgagtgtttcatatttcagtctcttgagctctaatctcaaatgaggaatcttgggttactcgaaattactctgctttgctctctctttgtct  6106700                                                                                                  ---                                                                                                -----                                                                                                <----                                                                                                <----                                                                              <---------------AGL15                                                                              --------------->AGL15                                                                        --------->DAG2          <----                                                                       ==============================          --------->GLK1(2)                                            ---------->DOF2          -----         <---------GLK1(2)                                          --------->YAB1           --------   --------->LBD16                         <----------DOF2         <---------YAB1        --------->HSFC1(2)  <---------ANAC46                        <---------ANAC58       <----------DOF2         <---------HSFC1(2)  <---------ANAC58                        <---------ANAC58       ====================================  <---------ANAC58              <---------At4g35610         --------->ANAC58  <---------ALFIN1  <---- <---------LBD16              <-----------RAV1(2)           --------->ANAC58 ----------------->AGL3   atttccgtatagattctgtctctagtttaaactcagatggtttggctttactctcgcttctcaagcactttgataaagtcccacttgaagtagcttcgac  6106800                                              <---------ANAC58                                              <------MYB83    <------ZmHOX2a(1)                         <------MYB46(1) ------>ALFIN1                       <-----------GT1 ---->O2                          <---------ICU4             ------>ZmHOX2a(2) -----bZIP60(2)        --------->ANAC58       <---------ANAC58 -----ANAC46           --------->ANAC46      <---------MYB46(3)            <---------ANAC46 -----TGA1a            --------->ANAC58      --------->MYB46(2)         <-----------RAV1(1) =====bZIP_DOF       --------->AtMYB61       <---------AtMYB61<----------DOF2                       - ---->TGA1a  ----------->RAV1(2)  --------->YAB1           --------->ARR11(3)  --------->HSFB2a(2) <- --->HVH21   --------->At4g35610 <---------YAB1            <---------ARR11(3)<------NtERF2       <--- =====bZIP_DOF      --------->MYB46(3)       --------->MYB111(1)  --------->HSFB2a(2) <---------MYB52(1) -----O2     <---------At4g35610 --------->ICU4  <-----------HVH21<---------HSFB2a(2)--------->TOE2(3)   gtggaaggagaacacatctgaaaccactccatgtaataataactggtttggtgtcatttgtgatctttctggtaatgtcgtcgagacccttaatttgtct  6106900                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 ====                                                                                                 <---                                                                                                 ----                                                                                                 <---                         ============================================================================                     <------MYB46(1)                                                             ----            --------->ANAC58                                 <---------AGP1                      <---            --------->ANAC58                                 --------->ARR11(3)                  <---            --------->ANAC46                 <---------ARR11(3)                                  ----        <-----------HVH21<-----------------AGL2    <-----------HVH21                         <-------       <----------DOF2   <-----------------AGL3   <------MYB83<---------GLK1(1)              <-------  --------->HSFB2a(2)<------MYB83<---------LBD16  <------MYB46(1)                          <--------- ---------->RAV1(2) --------->MYB59          --------->ARR11(3)------>ZmHOX2a(2)        --------->ATHB12 ---------DOF2      <---------TOE2(3) <---------At4g35610    <---------ARR11(3)       <----------DOF2 ------At4g35610--------->WOX13(1)    --------->At4g35610   <---------CCA1(2)<---------GLK1(2)   ----   gcttctgggctttcaggccaattaggttctgaaattggggagcttaagagcttggtcacattggatctcagtcttaacagtttctctggtttattgcctt  6107000            --------->ZAT14            <---------ZAT14 <---------DAG2 <----------DOF2 ------------>AGL15 -------------AGL15 -------ALFIN1------->TEIL ======================================================================================MADS_MADS --------------AGL1                                                   <---------RVE1(1)         <---- ------------->AGL1                                                   <---------------AGL15     <---- --------------AGL3                                                --------->LBD16             <----- ==============MADS_MADS                                --------->LBD16           <---------ANAC46 ------------->AGL2                                    --------->HSFB2a(2)        <---------ANAC58 --------------AG                                      <---------HSFB2a(2)        <---------ANAC58 --------------AGL2                                   <---------LBD16<-----------------AGL3   <------ ------------->AGL3        <---------ARR14(2)  <--------ATHB1      ------>ZmHOX2a(1)      --------->GLK1(2) --ANAC58 --------------->AtSPL8               --------->YAB1  <---------ARR14(2)--------->At4g35610 --ANAC58 <---------------AtSPL3              <---------YAB1   --------->ARR11(3)<---------At4g35610 --GT1<------ZmHOX2a(1)    --------->ARR14(2) --------->ICU4 ----------->ARR10 <--------P<---------GLK1(2) ------------->AG<---------ZAT14              <---------ATHB12 --------->ARR14(2)<-------------------   ccactttaggaaactgtacttcacttgagtatttggatttgtctaacaatgatttttctggagaagttcctgatatttttggtagcttgcagaatttgac  6107100  Previous    Next  AGI:  At1g17750.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to protein binding [Arabidopsis thaliana] (TAIR:AT1G73066.1); similar to PEPR1 (PEP1 RECEPTOR 1), ATP binding / kinase/ protein binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G73080.1); similar to hypothetical protein OsJ_026394 [Oryza sativa (japonica cultivar-group)] (GB:EAZ42911.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23192.1); similar to Receptor-like protein kinase precursor (GB:P93194); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); Range:  from: 6106649    to: 6110113    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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