Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ANAC58     ----------->GT1             <---------ANAC46                                                 ---  --------->CCA1(2)              <---------ANAC58                                             ------- --------->ARR11(3)           <---------CCA1(2)                     <----------DOF2    <---------TOE2(3) ---ZmHOX2a(1)   ------>ZmHOX2a(1)     --------->ATHB12  <----------DOF2   --------->ARR14(2)--------   gatgatatggtgaagtctcctccctctctcccatgtcttgttcattgcaaagtcttgttctttcatgtttcttttcatatacacttgttaatgaataaag  6100600                         <---------ARR14(2)                         ------->TEIL                <---------ANAC55(2)                      <------                         --------->ARR14(2)        --------->AHL20(2)            <---------TOE2(3)                         <---------ARR11(1)    --------->AHL20(2)          ----------->GT1    -------                 --------->DAG2                <---------AHL20(2)         <---------TOE1(3)<---------HSFB2a(2)                ---------->DOF2               <---------AHL20(1)          <---------TOE2(3)--------->HSFB2a(2)       <-------TEIL      --------->GLK1(2)    <---------AHL20(2)    --------->DAG2     <---------ANAC58 -------->GT1 <------ZmHOX2a(1)               --------->AHL20(2)   ---------->DOF2     <---------ANAC58 -->DAG2<---------ANAC58 <-----------ARR10    --------->AHL20(1)--------->YAB1  ---------->DOF2 -->DOF2<---------ANAC58<---------ARR14(1) --------->YAB1---------->DOF2  <---------YAB1<----------DOF2   ttgaaaaaattcgtgaggaaaagtccgaatctatcttctctgcaaaaataaaattaagtaaaagaaacataaagttatggtttaaagatgctttcggaaa  6100700                                                     --------->AHL20(2)                                           <--------HAHB4                                           <---------ICU4                                           --------->YAB1                                           --------->ATHB51                                           --------->AHL20(2)                             --------->At5g28300                                           -------->ATHB1                                ----------->GT1                                           <---------AHL20(2)                 <---------YAB1                                          --------->ICU4<---------YAB1 ------->MYC3      --------->ANAC46                                        --------->WOX13(1)      <------ZmHOX2a(1)        ------->GAMYB     <---------YAB1              <------MYB46(1)     <---------AHL20(2)<-------MYC3    <---------At5g28300   <--------HAHB4                <------MYB83  <<<<<<<<<<GT-3b<---------TOE2(3)    --------->YAB1   <---------ICU4               <---------AtMYB61  <----------DOF2   ------->TEIL------->TEIL  <---------ATHB12           --------->ATHB12<---------YAB1  --------->YAB1<---------YAB1--------->TOE2(3) ---ARR14(2)              ---------->DOF2 <---------ATHB51   <---------ICU4--------->ICU4--------->TOE1(3) -->ARR14(2)          <---------ANAC55(2) <---------ATHB12--------->YAB1--------->ICU4<-----------GT1   ctccatcattttagtgggagaatcacataaaagattggtcgtcaattatttttcttttattaataaggatgcacatgatgatgaatattaaccgtaatat  6100800                                            --------->AHL20(1)                                            <---------AHL20(1)                    <----------DOF2                                            --------->AHL20(2)          --------->AHL20(2)                                            <---------AHL20(2)         <---------YAB1                                        --------->ICU4              <---------AHL20(2)                                   --------->YAB1              ------->TEIL <-----------GT1                 ------->TEIL      ----------->GT1   ----------->GT1--------->AHL20(2)        ----------->HVH21       --------->YAB1 <---------WOX13(1) <----------DOF2 <---------DAG2   actaatatagatgacaatgtatttcagtgctaaattatagtaacaattaattgaatgcttaaatgaatcttttattatatactactttatatgtgttttt  6100900                                                         *TSS                                                         ------->MYC2                                                         <-------PIF4                                                         <-------MYC3                 <---------ICU4                          ------->PIF4                <---------MYB59                 --------->YAB1                          ------->MYC3                <---------MYB46(2)                --------->ICU4                           <-------MYC2             <-----------GT1                <---------ATHB12           ------>ZmHOX2a(1)                   <----------DOF2            ------------>CBF          <---------HSFB2a(1)------->MYC4--------->AHL20(2)      <------------CBF            --------->ANAC58       <-------PIF5<---------AHL20(1)------>MYB46(1)    <---------AHL20(2)   ------->TEIL --------->HSFB2a(1)------->PIF5<---------AHL20(2)------>MYB83    <---------YAB1 <---------YAB1 --------->ANAC58    <---------AtLEC2    <-----------GT1  --------->MYB52(1)   tttgttttaattgagacaatgatgatgcacctagacaagaacgtcctactctctgtgcatgtgcttctcattttatttactcttttaccaaacaaactgt  6101000                                                                                                  <--                       --------->ZAT18                                                            <--                       <---------ZAT18                                                <---------DAG2                 <------MYB46(1)                                                      <----------DOF2                 <---------MYB46(3)         --------->AHL20(2)                  <<<<<<<<<GT-1     ---                 <------MYB83           --------->AHL20(2)                      <-----------GT1   <--             <-----------RAV1(1)        <---------AHL20(2)            --------->At4g35610 <---------At4g35610        <---------ANAC55(2)            --------->AHL20(2)        ------>ZmHOX2a(1)--------->MYB46(3)<        --------->ANAC55(2)         ----------->GT1      <---------MYB52(1)  --------->YAB1    ------   tcaacttaatacataatgttggtagcccacaatgtgaaagattaaattaaaactcatccattacctcctgtaagctctatattaaccactttagctcttc  6101100                                                                                         --------->MYB52(1)                                                                                        ------->GAMYB                                                                                        =============                            <---------YAB1                                              ----------->HVH21                         --------->ICU4                                                <---------MYB52(2)                         --------->AHL20(2)                                           --------->At4g35610            <---------MYB111(2)                                                     <---------WRKY12            --------->MYB46(3)                                                      <---------WRKY38(1)            <---------MYB55(2)                                                     --------->DOF5.7(2)       --------->YAB1  <---------ICU4                                              <---------MYB52(1) --------->ANAC58   --------->YAB1                                                 <------NtERF2 --------->ANAC58  <---------ATHB12                                               <-----------HVH21 <---------ALFIN1 ------>MYB83             <-----------HVH21                      <---------RAP2.6(3) -------ZAT18     ------>MYB46(1)<---------AHL20(2)                         ========================= -------ZAT14 --------->ANAC58  --------->AHL20(2)                          ---------->DOF2       --- ------>ZAT14------->GAMYB<---------AHL20(2)                               <---------WRKY12       <-- -------At4g35610--------->WOX13(1)   ---------->DOF2                    <-----------HVH21    ------- ---------ZAT18--------->MYB46(3)--------->AHL20(2)                    --------->SPL7 <---------At4g35610 --->At4g35610--------->ANAC58 <---------YAB1                 <---------ANAC46   --------->RAP2.6(2)   tgcacacactcacaacaaccaatcatatttattattaaaaaaaagagtcatggcattttcatcttcgtgttcgtccgtcaaagccgtcaactcacggtgg  6101200                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                 ----------->RAV1(1)           ------                                                              --------->ANAC55(2)              ------                                                              <---------ANAC55(2)              ------                                                              --------->ANAC46                -------                                     ------>ZmHOX2a(1)        --------->ANAC55(1)             -------                                 <-----------HVH21            --------->ANAC58                -------                                 ------>NtERF2                --------->ANAC58                <------NtERF2                                 --------->ORA47(1)        --------->ARR14(2)                 -------                                 <---------SPL7            <---------ARR14(2)                 -------                                 <---------RAP2.6(3)      <-------GAMYB                       -------                          <---------GLK1(2)               <-----------HVH21                   -------                          --------->ARR14(2)           ------>NtERF2                         <-------            ----------->HVH21   --------->DEAR3(1)     --------->ABI4(1)           ------->GAMYB <---           <-----------HVH21<-------TEIL              --------->ANAC46            --------->MYB46(3)           <-----------TGA1--------->ARR14(1)         --------->DEAR3(1)         --------->RAP2.6(3) =======MYC_MYB           <---------ARR14(2)         --------->MYB46(3)         --------->MYB52(1) =======bZIP_DOF       --------->HSFB2a(2)          <---------At5g28300 <-----------HVH21    <------- ------>TGA1a          <---------HSFB2a(2)         <---------ALFIN1<---------MYB52(2)        <------- -------TGA1a   --------->DEAR3(1) --------->SPL7<-----------HVH21 --------->MYB46(3)       --------- -->ALFIN1--------->ANAC46--------->ARR11(1)<----------DOF2<---------MYB52(1) <---------MYB52(2)-----   acgtctccgtctccgtcaccgtcttctagattcgccgtcctccctgctttccttcaccgccgttacgcaacaagcgtcaaactaacggccataagcgccg  6101300 ----ALFIN1 --->RRTF1(3)                                           <---------At4g35610 --->DREB2C(2)                                          --------->At4g35610 --->RRTF1(2)                                           <------ZmHOX2a(2) --->RAP2.3(3)                                         --------->ARR14(2) --->DEAR3(1)                                          <---------AGP1 --->RAP2.6(2)                                         <-----------ARR10 --->RAP2.3(2)                                         <---------ARR14(2) -->RRTF1(1)                                          <---------CCA1(2)                             - -->RAP2.6(1)                                     <-----------HVH21                                <- -->ATERF1(1)                                    --------->DEAR3(1)                               <-- -->RAP2.3(1)                                   --------->MYB46(3)                                --- -->DEAR4(2)                             --------->GLK1(2)                                        <-- -->ORA47(2)                            <---------ARR14(2)                                        <-- -->ERF1                                <---------GLK1(2)------>ZmHOX2a(2)                        --- --RAP2.3(1)                    ===============================HOX2a_HOX2a                        <-- ---NtERF2                      ================================HOX2a_HOX2a                       --- --DEAR4(2)            --------->DOF5.7(2)      --------->DEAR3(2) <---------YAB1                <--- --ATERF1(1)          --------->TOE2(3) --------->ARR14(2)----------->HVH21                     ----- >ANAC46<-----------HVH21       <------ZmHOX2a(1)------->GAMYB   --------->At4g35610          ------- ->NtERF2       --------->MYB52(1) --------->MYB52(1)<---------DEAR3(2)                 ---------->DOF2   ccttaaaaaccgtcgagcaaacgacgttaacagaggataacagattctcaaccgtcggatctgactctgatgaatacaatccaactcttccaaagccgag  6101400                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)     ----------->HVH21                                                                    --------->CCA1(2)    <-----------TGA1               <---------ARR14(2)                                    <---------ARR14(2)    <-----------HVH21              <-----------ARR10                                     <---------ARR11(3)   --------->ANAC46           <---------ANAC58              --------->WRKY12             --------->ARR11(3)   --------->bZIP60(2)        <---------ANAC58              --------->WRKY45             --------->GLK1(2)   --------->O2               <---------ANAC46           <---------ANAC46                --------->ARR14(3)  ------>ZmHOX2a(1)          <------NtERF2              <------NtERF2                    <---------ARR14(3) ----->ZmHOX2a(2)           ------>NtERF2 <-----------RAV1(2)<---------WRKY18(1)         --------->ARR14(2) -----ZmHOX2a(2)            --------->LBD16 --------->LBD16 --------->WRKY38(1)        ----------->ARR10 -------ARR14(2)            <---------RAP2.6(3)        ------>NtERF2         <----------DOF2 ------>ARR11(3)           --------->ATERF1(2)        <---------DEAR3(1)    ------>ZmHOX2a(2) -------ARR14(3)           --------->DEAR3(1)         ----------->HVH21    <------ZmHOX2a(2) -------ARR11(3)           <---------DEAR3(1)   <---------GLK1(1)         <---------ARR11(3) ------>ARR14(3)           <---------ATERF1(2)  --------->GLK1(1)<---------ZAT14     <------NtERF2 ---------ARR10           --------->ATERF1(1)   --------->ARR14(2)     <---------TOE1(2) <---------AGP1 ------>ARR14(2)        --------->GLK1(2)------>ZmHOX2a(1) --------->DOF5.7(2)      --------->LBD16 ---ZmHOX2a(1)  --------->TOE1(2)  --------->ARR14(2) --------->DEAR3(1)  --------->ARR11(3) ------>ARR10 --------->GLK1(2)    ------->TEIL <---------ARR14(2) <----------DOF2<---------LBD16   - -->LBD16     <---------ARR14(2)  <---------CCA1(2)<---------DEAR3(1)--------------------->WRI1  >>>>   gatcctcgtcaccgagaaactgggagaagccggcgtgaatctcctcagggaattcggcgacgttgactgctcttacgatctttcgccggaagatctgaag  6101500  Previous    Next  AGI:  At1g17744.1    Description:  unknown protein Range:  from: 6100954    to: 6101976    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g17745.1    Description:  PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate dehydrogenase. Identical to D-3-phosphoglycerate dehydrogenase, chloroplast precursor [Arabidopsis Thaliana] (GB:O04130); similar to EDA9 (embryo sac development arrest 9), NAD binding / amino acid binding / binding / catalytic/ cofactor binding / oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor / phosphoglycerate dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G34200.1); similar to D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative [Arabidopsis thaliana] (TAIR:AT3G19480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68604.1); simila Range:  from: 6100957    to: 6105258    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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