Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ---------->DOF2                   ---------->DOF2                      <---------AHL20(2)       <---------At4g35610                      --------->AHL20(2)       --------->At4g35610   <---------GLK1(2)         ------               <------ZmHOX2a(2)          --------->YAB1<---------AHL20(2)                =========== ------>AHL20(2)   <---------ICU4  <------ZmHOX2a(1) --------->AHL20(2)           <----------DOF2---- >ZmHOX2a(1)   ===========================HOX2a_HOX2a<---------AHL20(2)  <---------YAB1   <----------   taaattagctattttagatcaaaattatatatagaaaggactaagcatcagctatttttttattcgaaaaagattatcatctatctttgcttcaatacaa  6061800         <---------ANAC58         <---------ANAC58         <---------ANAC46         <------MYB83         <------MYB46(1)        <---------ZAT18        --------->MYB111(1)   --------->At4g35610        <---------MYB46(3)    --------->ZAT2        --------->MYB46(2)    <---------ZAT2        <---------AtMYB61     <---------At4g35610     --------->ATHB12     <-----------HVH21                     ---------->DOF2    <---------ZAT2 ---->DOF2             --------->ANAC55(2)           <----------DOF2               --------->ZAT2 ==========================================================================MADS_MADS ------->GT1         <-----------GT1             <---------CCA1(2)   <----------DOF2 -----AGL15       --------->ARR14(2)      <---------YAB1   <---------------AGL15  --------->MYB52(1)   agtaaaatgtttggtgttcgaattcacgtttcagctcacaaattatgttttctatctttttctatacaaagctttcattttagccaactggaatgtgtaa  6061900                                            -------->HAHB4                --------->AHL20(1)          --------->ATHB12                <---------AHL20(2)          ----------->GT1                --------->AHL20(2)         --------->ICU4                                   ---------               <---------ATHB12            <---------ATHB12                             <---------MYB52(2)      <---------YAB1 ----------->GT1<---------TOE2(3)        <-----------GT1    <---------ANAC58  --------->YAB1<---------AHL20(1)  <---------YAB1        <-----------GT1       <---------ANAC58 ----   gtaatcatattatagcaataaattggtatataagaattaagataaatgattaaaacatatttatcacattttctcccaaaatgcttagcaaataacaact  6062000                                          ----------->HVH21                                        --------->O2                                        --------->ANAC55(2)                                        <---------ANAC58                                        <---------ANAC58                                        --------->ANAC46                                        <---------TGA1a                                        --------->TGA1a                                        <---------O2                                        ---------                                    <---------ALFIN1                      --------->At4g35610                                   <---------REM1(2)               <---------ANAC58         ---------    <---------TGA1a                --------->ZAT14   --------->ANAC46 --------->REM1(2)     <--------    --------->O2             <-----------GT1       --------->ANAC46<---------ANAC58      --------->WRKY38(1)    <---------O2           --------->YAB1<-----------HVH21         <---------ANAC46     <----------CDC5    --------->TGA1a  --------->ANAC46 --------->ANAC46             >>>>>>>>CAMTA3    --------->LBD16 >MYB46(3)           --------->ANAC58 --------->ANAC58       ----------->HVH21     <---------LBD16 ----->ZAT14         --------->ANAC58 --------->ANAC58     <---------ANAC46--------->ARR11(3)  <-----   ggactctcgtgacttctccttgcaccctataatactctacacgcgtgacatctacgcgctggtgtgaacgcgtgtaagctctagtcccgcgttgagctgt  6062100                                                            <---------YAB1                                                          --------->ATHB51                                                          <---------AHL20(2)                                                          <--------HAHB4                                                          <---------ICU4                                                          --------->YAB1          <---------DEAR3(2)                              -------->HAHB4         --------->ETT(1)                                 -------->ATHB1         <---------DREB2C(2)                             <---------ATHB51         <---------At1g77200                             <---------ATHB12       <-----------HVH21                                 --------->ICU4 >ZAT2<-----------RAV1(1)                                <---------YAB1         --------->ZAT6    --- >At4g35610                                            --------->YAB1 <-----------GT1            <--- -At4g35610                <---------ALFIN1        --------->ZAT6    <---------ATHB12        -------- ------HVH21   ------>ZmHOX2a(1)   ------>ZmHOX2a(1)   <---------ICU4--------->MYB46(3) --------->TOE2(3)   cactctctgtgtcggtcctcttcgcttcccctctctccttctccactaatcttacactaattattaaactaatcacccattaactctaaatctcaacaaa  6062200                                              <---------ICU4                                              --------->YAB1         *TSS                    <---------ARR11(3) <---------GLK1(2)              <---------CCA1(2) <---------ICU4      --------->ANAC58        --------->ICU4              ------>ZmHOX2a(1) ------>YAB1         <---------ALFIN1        <---------YAB1          --------->ARR14(2) ------ATHB12        --------->ANAC58   --------------->AGL15        <---------ARR14(2) --------->TOE2(3) ->MYB46(3)---------->DOF2    ------>ZmHOX2a(1) <---------YAB1   <---------ATHB12    <---------CCA1(2)   tcataatctcttataaagaagacacacatctcctaaatcttacccttattattattcattctctctaatcaaatcctcttctctctcaaatctcaatctc  6062300                                                                  --------->MYB46(3)                                                                  <---------MYB111(2)                                                                 -------->P                                                               <---------ALFIN1                                                           ------>NtERF2                                                           --------->ABI4(2)                                                           <---------ZAT18                                                          --------->ALFIN1                                                         <------NtERF2                                                         --------->ATERF1(1)                                                        <---------RAP2.3(1)                                                        <---------MYB46(3)                                                        <---------DEAR4(2)                                                       <---------DREB2C(2)                                                       <---------ANAC58                                                       <---------DEAR3(1)                                                       <---------ANAC46                                                       <---------ANAC58                                                      <---------ABI4(1)                                                    --------->ALFIN1                                                    <---------DEAR3(1)                                                    ----------->HVH21                                                   --------->ATERF1(1)  ------>MYB46(1)                                                   <-------GAMYB ------>MYB46(1)                                                  <---------MYB46(3)    ------>MYB83                                                 <---------At1g77200   --------->WOX13(1)                                                 <---------DREB2C(2)  <---------ALFIN1                                                 <---------DEAR3(1)--------->AtMYB61                                               <-----------HVH21 ------>MYB83                                           --------->DEAR3(1)  --------->MYB46(3)     <------NtERF2           ----------->RAV1(1)           ------>NtERF2<------NtERF2------->GAMYB     ------>NtERF2          --------->ANAC58               --------->LBD16<---------ERF1--------->MYB46(3)          --------->ANAC46              --------->ANAC58<---------DEAR3(2)           --------->LBD16          ----------->HVH21             --------->ANAC58<---------ORA47(2)          --------->LBD16 -          --------->ANAC58              --------->ANAC46<---------ATERF1(1)        <---------LBD16  <   <---------YAB1                     ------>MYB83<---------DEAR3(2)  --------->AtMYB61     --------- --------->YAB1                       ------>MYB46(1) --------->ATERF1(1)      <----------DOF2      - <---------ICU4     <-----------GT1 --------->AtMYB61------>NtERF2<---------MYB55(2)<---------LBD16 <   cgattatgacagacgacagagtttaccctgcatcaaaacctcccgccatcgtcggtggcggtgccccaaccaccaatccaactttcccggcgaacaaagc  6062400                                                                                            <--------                                                  <---------SPL7                      <-------GAMYB                                                 --------->TOE2(1)                   <-----------RAV1(1)                                     ----------->RAV1(2)                         <---------MYB52(1)              <---------ARR14(2)     --------->ZAT2                            <---------MYB46(3)          ------->GAMYB              <---------ZAT2                            <---------ANAC58         --------->ANAC46            --------->At4g35610                       <---------ANAC58         --------->ANAC58            <---------At4g35610                     ------>NtERF2<---------ANAC58 --------->AGP1              --------->ORA47(1) <------NtERF2              <---------RAP2.6(2)   ---- -------->ZAT2<-----------ARR10--------->SPL7 <---------DEAR3(1)          <---------At4g35610    ---- ---------At4g35610     --------->WRKY12   <---------DEAR3(1)         <-----------RAV1(1) <---------ANAC58 ->DOF2  --------->ANAC58 <---------At5g28300<------NtERF2       --------->LBD16<-------GAMYB    <--- -------->At4g35610--------->SPL7  --------->MYB46(3)       <---------ALFIN1<XXXXXXXXXXXXXXXXXXXXMIR834 ---------ZAT2--------->ARR14(2)   <-----------RAV1(2) --------->ANAC46   --------->At4g35610    <---   tcagctctacaacgcaaatcgtcccgcttaccgtccaccagctggtcgtcgtcgtactagccatacccgtggatgttgctgccgttgctgttgctggacg  6062500                                          <---------At4g35610                                        --------->MYB46(3)                                       --------->At4g35610                                      <-----------HVH21                                    ------>NtERF2                                    <------NtERF2                                    --------->LBD16                                   --------->DEAR3(1)                                   --------->RRTF1(2)                                   --------->RAP2.6(2)                                   --------->RAP2.3(2)                                  --------->ATERF1(1)                                  --------->DEAR4(2)                                  <------NtERF2                                  --------->RAP2.3(1)                                  --------->RRTF1(1)                                 --------->ABI4(1)                                 ------>NtERF2                                 <---------ATERF1(1)                                --------->DEAR3(1)                                --------->RAP2.3(3)                                --------->ANAC46                                <---------DEAR3(1)                                --------->RAP2.3(2)                                --------->ATERF1(2)                                <---------ATERF1(2)                               --------->RAP2.6(1)                               --------->ERF1 <------NtERF2                               --------->RAP2.3(1)                               --------->DEAR4(2)                               --------->RRTF1(1)            <---------At5g28300                               --------->ATERF1(1)      ------>MYB46(1)             ------>ZmHOX2a(1) <------NtERF2 <-----------HVH21        --------->YAB1         --------->ORA47(2)       ------>MYB83        <---------ICU4        <---------RAP2.3(1)     <---------MYB59       <---------ATHB12       ------>NtERF2  <---------RAP2.6(3)                    <---------At5g28300  --------->YAB1              <---------ATERF1(1)     <---------MYB111(1)     ------>MYB46(1) -SPL7 --------->ICU4        <---------DEAR3(1)      --------->ANAC55(2)      ------>MYB83 ----->ARR11(3)              --------->DEAR3(1)<---------ANAC46          ------->GAMYB ----->ARR14(2)            <-----------HVH21--------->DEAR3(1)      ------>ZmHOX2a(1) --------->DEAR3(1) ------ARR14(2)       ------>ZmHOX2a(1)<---------At4g35610  <-----------GT1 <---------MYB59  <------- ------ARR11(3)--------------------->WRI1 --------->At4g35610-------->P --------->MYB46(3)   --------   atattcgtaatcatcctcttactcctcatcgtcgccgccgcatcagccgtcgtatacctaatctaccgtcctcaacgacctagcttcaccgtctctgaac  6062600                                            ------>NtERF2                                           --------->DEAR3(1)                                           --------->RAP2.6(2)                                           --------->DREB2C(2)                               --------->SPL7                              <---------MYB52(1)                             <---------SPL7--------->ANAC46                            --------->DEAR3(1)       <---------ALFIN1   --------->LBD16  ------->GAMYB                  --------->TOE1(3)  <---------ARR11(3)      ------>NtERF2 --------->DEAR3(1)             --------->GLK1(1)  --------->ARR11(3)     --------->ANAC46--------->ABI4(1)            --------->ARR14(2)  <-----------ARR10      ------->GAMYB --------->MYB46(3)  <-----------HVH21 <---------GLK1(2)      --------->MYB46(3)--------->MYB46(3)<---------MYB52(1)        --------->TOE1(2) --ZAT14              --------->ARR14(2)--------->AtMYB61  <-----------TGA1   >>>>>>>>>MYB98        - ->ZAT14              <---------ARR14(2)<---------ALFIN1  --------->ANAC46--------->TOE2(3)  <-------TEIL   tcaaaatctccactctcaacttcacatccgccgttcgcctcaccaccgccatttccctctccgtcatcgccagaaaccctaacaaaaacgttggattcat  6062700  Previous    Next  AGI:  At1g17620.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11890.1); similar to unknown [Populus trichocarpa] (GB:ABK96083.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 6062209    to: 6063284    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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