Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------YAB1                                                       <-                            --------->YAB1                                       ----------->GT1   <-                          <---------WOX13(1)<-----------HVH21               <---------YAB1        <--                  ------->GAMYB       ------->MYC3                   <---------ARR11(3)           ---               ----------->RAV1(1)    <-------MYC3      ----------------->AGL3   --------->YAB1   ---          --------->At4g35610<---------TOE2(3)       --------->At4g35610<----------DOF2           <-- --->At4g35610--------->REM1(1)   <-------TEIL ---------->DOF2       --------->ARR11(3)       -------   tctctctctctctgcttcaacagagaagattgatgatacatgtgtctgtcaaagaagctccaaattcagaacatctttataaatgataaaactttcaaaa  6052100         --------->HSFB2a(2)                                      <----------ID1         --------->LBD16                                         ----------->GT1         ------>ZmHOX2a(1)                                     --------->DAG2        <---------LBD16                                       ---------->DOF2   <---------AHL20(2)                                      --------------->AGL15 --------CCA1(1)                                           <---------------AGL15 --------RVE1(1)                                          ----------------->AG -------AHL20(1)           --------->WRKY12               ----------------->AGL1 ------>ARR11(3)           ----------->HVH21              =========================================== ------>AHL20(1)         <----------DOF2             <---------KAN4(2)        --------->LBD16 -------ARR11(3)        --------->TOE2(3)  ---------->DOF2----------------->AGL2               ------ --->DOF2<---------HSFB2a(2) <---------TOE2(3)     ----------->GT1----------->GT1        ----------->RAV1(1)   gatatttattcctggaaacagcaaaacctttgacgatgtagtagacaaagaaggggataatccaaaaagggaaaaaaacccagaaacagagcaacattca  6052200                                                                                               ------                                                                                               ------                                         ----------->GT1                                       ------      <---------LBD16                   --------->DAG2                               ------>ZmHOX2a(1)      <---------ANAC58        <------NtERF2                                       ---------->ID1      <---------ANAC46        --------->At4g35610                               <---------ANAC58  <--      <---------ANAC58       ----------->RAV1(1)         ------>MYB46(1)        <---------ANAC58  <-- <---------------AGL15      <---------DEAR3(1)           ------>MYB83        <----------DOF2  ------- --------------->AGL15     <---------LBD16         <---------ETT(1)  ----------->RAV1(1) --------->DAG2 ================MADS_MADS --------->ZAT18  ---------->DOF2        --------->At4g35610 ---------->DOF2 --->YAB1         --------->YAB1       ---------->DOF2--------->MYB46(3) <---------MYB52(1) <--------   gaactatttcgggcaaactattagaagagcgcggcagaaaaaaaagtaaagttccgaccaactaaaatcagcaccattactttcgtcctaaaaggcgttg  6052300                          --------->LBD16                    <---------ARR11(3)                    <---------ARR14(2)                    --------->ARR14(2)         --------->HSFB2a(1)         --------->ZAT14         <---------HSFB2a(1)       --------->bZIP60(2)         <---------HSFC1(2) <---------ARR14(2)                                                      -     --------->ANAC58--------->GLK1(1)                                                              <     --------->ANAC58<---------GLK1(1)                                                           <--- --->WRKY45         --------->ARR11(3)                                                          <---- --->WRKY12    --------->LBD16--------->YAB1                           ---------->DOF2         ------ --->WRKY38(1)--------->HSFC1(1)<---------At4g35610           --------->MYB52(1)              <------ -------ANAC58<---------HSFC1(1)--------->At4g35610          ----------->HVH21             --------->ARR11(3) -------ANAC58--------->HSFB2a(2)  --------->ANAC46  <----------ID1--------->ARR14(2)      <---------ARR11(3) -->DOF5.7(2) <---------HSFB2a(2)<---------ALFIN1 --------->DAG2   <---------ARR14(2)   xxxxxxxxxxxxx -ANAC46 --------->HSFC1(2) --------->ARR14(2)   ---------->DOF2<---------ANAC46<------ZmHOX2a(1)----   acttgggaagaaatttccagaagatttccgaatcagcacatcactctaaaaaaaagcgaagaaatgacggattcaaagagaaggagatagagagacctta  6052400     --------->ANAC46     --------->ANAC58     --------->ANAC58 -------->ARR14(2) ---------ARR14(2)                                                                           -------- ------ANAC55(2)                                                                          --------->ARR14(2) -----LBD16                                                                               --------->ARR11(3) --->MYB52(1)                                                            <---------ANAC58 <---------GLK1(2) ---SPL7    --------->CCA1(2)                      ----------->GT1       <---------ANAC58 <---------ARR14(2) xxxxxxxx>smallRNA(se3)   --------->GLK1(1)      ---------->DOF2    <----------DOF2     ----------->ARR10 ----->ANAC55(2)        <------ZmHOX2a(1)  --------->YAB1    <----------DOF2--------->KAN4(2)--------   cggattcaaggaagagatgaagaacaggaactcaagggatgcctatcaaaacaaagtaaatctcttttctcttttgcttattctctcagatagatactca  6052500                                                                                                    <                                                                                                    -                                                                                                   --                                                       <-----------GT1                             --                                                 ------------>CBF                                  ==                                                --------->YAB1                                  <----                                           <---------MYB52(1)                                   -----                                          <-----------HVH21                  <---------DAG2     -----      ------->TEIL                        <-----------TGA1                <-----------GT1       <---- ->ANAC58                         *TSS   --------->ANAC55(2)           <---------ICU4      <--------- ->ANAC58               <----------DOF2  --------->ANAC46         ---------->DOF2  ----------->RAV1(1)   acagtgtgtatgtgtgtgtgtgtattcttttgatgcttcatttccgtcactcacaattttctctcttataaagtcattacctttccaacaaaatcaccag  6052600             --------->SPL7         --------->ZAT6         <---------------AtSPL3   --------->ATHB51   --------->ATHB12   <--------HAHB4   <---------ICU4  ------>NtERF2  --------->ICU4  --------->DEAR3(1)  <---------YAB1  <---------ALFIN1 ---------------AGL15                              --------->ARR11(3) -------------->AGL15                              --------->AHL20(1) --------------->AGL2    --------->TOE2(3)         <---------ARR11(3)                       <-------- --------------->AGL3   --------->ATHB12           <---------AHL20(2)                       ========= ==================================================================================================== -----ZAT2  <---------ARR14(2)                     --------->AHL20(2)                      --------->ANAC55(2) ---->At4g35610 ------>NtERF2                   --------->AHL20(2)  <---------YAB1         --------->ANAC46 ---->ZAT2  --------->ARR14(2)                 <---------AHL20(2)  --------->YAB1<---------AHL20(2) -----At4g35610--------->DEAR3(1)              --------->AHL20(2)  --------->TOE2(3)    <---------ZAT18 --GT1   --------------->AtSPL3    <---------YAB1  <---------AHL20(1)          <---------YAB1    ----   ctccattattagcagtaccgccaccttcattagtatttttaatgcttaattaatatattagttttctaatcttattgacttattattttgttcacttaac  6052700                                                                                                  ---                                                                                               ------                                     ---------->DOF2                                    ----------->HVH21                                <---------DAG2                                        <------NtERF2                                <---------------AGL15                                 --------->ZAT2-                                <----------DOF2                                       ----------->RAV1(2)       <---------ANAC55(2)<---------ARR14(2)                                          <---------ZAT2- -------AGL15             --------->ARR14(2)       --------->TOE2(3)                <---------RAP2.6(2) ===============================================MADS_MADS                           <-----------RAV1(2) =======MADS_MADS  <---------At4g35610            --------->YAB1      <---------ZAT18 <---------At4g35610 ------>DOF2       --------->At4g35610 ----------->GT1 ---------->DOF2--------->ZAT18 --------->At4g35610   aaagtaaacacttatctagttatctgcctatccactttacaaagtaaaactatcgtcaaaagcctaatctagtgagcaactatatggcagctgaagcatc  6052800           --------->At4g35610           <---------At4g35610          --------->GLK1(2)          --------->ARR14(2)                          <----------DOF2          <---------ARR14(2)                         --------->MYB52(2)   ---------->DOF2                      --------->ARR14(3) ------->DOF2                           --------->ARR11(3)                           <---------ANAC58 --->At4g35610                          <---------ARR11(3)                           <---------ANAC58 -------->ANAC58                        --------->GLK1(2)                        ---------->DOF2 -------->ANAC58      <----------DOF2   <---------ARR14(3)           <---------GLK1(1)       --------   taaagcaaagctaatctgcctactctttgtgtttatggacaaaatcttgaagcgttctttggatatagtggaactcagttccaaaatgcgagtggaaaag  6052900                                                                                                    <                                                                                                    -                                                                                                <----                                                    ----------->GT1                             <----                                                 ----------->RAV1(2)                          -------            --------->ANAC58                <-----------GT1                                   <------            --------->ANAC58             --------->MYB52(2)             --------->ZAT18       <------       --------->At4g35610               <---------MYB46(3)        ---------->DOF2         <------ZmHOX2a(1) -->DOF2  --------->At4g35610         ------------>MYB.PH3(2)<---------HSFB2a(2)         <---------TOE2(3)   agagagagaagcagaagcaagggagacttgaaatgtagtaagtttgttactacctggtaaattacagaagaaagcacacagtttaagtcttgaggaagct  6053000  Previous    Next  AGI:  At1g17590.1    Description:  CCAAT-binding transcription factor (CBF-B/NF-YA) family protein. Identical to Nuclear transcription factor Y subunit A-8 (NFYA8) [Arabidopsis Thaliana] (GB:Q9LNP6); similar to HAP2C (Heme activator protein (yeast) homolog 2C), transcription factor [Arabidopsis thaliana] (TAIR:AT1G72830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62549.1); contains InterPro domain CCAAT-binding transcription factor, subunit B; (InterPro:IPR001289) Range:  from: 6050215    to: 6052534    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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