Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <----------DOF2                                                                         ------>NtERF2                                                                        --------->WRKY38(1)                                                                        --------->WRKY12                                             --------->ZAT18            ----------->HVH21                             --------->TOE1(3)  --------->ANAC58      <---------At4g35610    ----------->HVH21        --------->TOE2(3)  --------->ANAC58      --------->At4g35610 -------->At4g35610     <---------ANAC58     <---------ZAT18      ----------->TGA1 ------>DOF2            <---------ANAC58    --------->ALFIN1      ----------->HVH21   <---------REM1(1) ->GT1          <---------ATHB12 <---------TOE2(3)  ---------->DOF2  <---------ANAC46<---------TOE2(3)   aaagctgagacagagctaatgaagtttcttaccttaatgtaaacaagtggacgctagagcccatataagtgacgctgactgggccttaatgtaggcccat  6034000                                                     --------->YAB1                                                    <---------YAB1                            <-------GAMYB      --------->ANAC58                        <----------DOF2        --------->bZIP60(2)                  ------->TEIL                  ---------->DOF2              --------->ANAC58     <-----------HVH21              --------->HSFB2a(2)           --------->MYB46(3)    <-------MYC3 <---------AtLEC2              <---------HSFB2a(2)         <-----------GT1 --------->ZAT6   --------->At4g35610              --------->LBD16<---------MYB52(1)--------->ANAC46   ------->MYC3<-------TEIL       ----   ttcaaactttggtctccgagaaaagtctttcgttgtctattttttaaccacgttatgataacactacatgtgtcatgagatgcatgaacatatgtcatga  6034100                                                                                    <-----------RAV1(1)                                                                            <-----------HVH21                                                                            <-----------TGA1                                                                           --------->ANAC46                                                                         --------->ANAC58    --------                                                                         <---------ANAC55(2) --------                                                                         --------->ANAC46    --------                                                                         <---------TGA1a     <-------                                                                         <---------O2       <--------                                                                         --------->ANAC55(2)---------                                                                         --------->O2    ------------                                                        ===========================bZIP_DOF <--------                                                    <---------WRKY18(1)  --------->TGA1a ------------   <----------DOF2                                 ----------->HVH21 <------ZmHOX2a(1)   <----------- --->TEIL       <------ZmHOX2a(2)    <---------KAN4(2)  <----------DOF2  --------->ANAC58============   acatactttcaatcttggatcaaaaaactaaattagaagaataaacagaagacttgacctttaagagggaaggacacgcgtcatctatgttgccattatt  6034200                                                                                            <--------                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                      --------->REM1(2)                                                                                      <---------ZAT14                          --------->ATHB12    <---------ICU4                          --------->ZAT14 >ATHB1                  <---------AHL20(2)   --------->YAB1                        --------->LBD16 ->ATHB51               <---------WOX13(1)   --------->ICU4                         <---------LBD16 ->ATHB12             --------->ATHB51       <---------ATHB51                      <---------ANAC58 --ICU4  --------->AHL20(1)                --------->YAB1         ---------->DOF2  <---------ANAC46 -YAB1   <---------AHL20(1)           <-------MYC3             <---------ANAC55(2) <---------ANAC55(1) >ICU4--------->YAB1 <---------YAB1   ------->MYC3          ========================================= ----->AGL1          <---------AHL20(2)----------->GT1     <-----------HVH21    --------->GLK1(2) -ATHB51 --------->AHL20(2)          <---------ANAC46   <-------GAMYB          <---------GLK1(1)<---- >ATHB5  <---------AHL20(2) <---------WOX13(1)-------->HAHB4----------------->AGL3 <---------ANAC58 ------AGL3        --------->YAB1    --------->O2      <---------MYB46(3) --------->TOE1(2) <-------- =============================================================================MADS_MADS <---------ANAC58   gaatagattaataaattagttttataattgattggagcaacgtgttaataatgaaggtcgttgtcacataaagaaacttgggattccgtggagtgcttat  6034300                                           <------ZmHOX2a(1)                                          --------->LBD16                                        <---------HSFB2a(2)                          <-----------GT1--------->LBD16               <---------AHL20(2)       <-----------RAV1(2)             <---------------AGL15      <---------LBD16            <---------HSFB2a(2)          <---------AHL20(2)            --------->HSFB2a(2)        --------->HSFB2a(2)          <---------AHL20(1)          --------->CCA1(2)       <---------ANAC46          --------->AHL20(1)         --------->ARR14(2)       <---------ANAC58  <-----------GT1   ----------->GT1  --------->AGP1           <---------ANAC58                   <--- -ANAC58 <---------AHL20(2)          <---------ARR14(2)  <---------ANAC58              <---------TOE2(3) ============================MADS_MADS<------ZmHOX2a(2)  <---------ANAC58            ---------->DOF2 -----YAB1--------->AHL20(2)         --------->ARR11(3)*TSS<---------MYB52(1)       --------->CCA1(2) -ANAC58 --------->AHL20(2)  --------->TOE2(3)     <---------TOE2(2)       --------->CCA1(2)     <---   aatttttctaattttattttttgggtaaaaacctcattagatccaggagaacccatgtttcgtttcgttttggaaagataagagagataaaggtttcgac  6034400                                                                                          <----------DOF2                                                                                      ----------->HVH21   <---------TOE1(3)                                         <-------GAMYB          <---------At4g35610   <---------TOE2(3)              <---------At4g35610       --------->MYB52(2)      ----------->RAV1(2) -------DOF2               <-------TEIL<---------WOX13(1)   <---------MYB46(3)      --------->At4g35610 ------DAG2            <---------YAB1--------->ATHB12     <---------MYB52(1)      <-----------GT1   ttttttaggtttttctgtgtgttttgtgattcatttcgctgattgatatcaattctctctgtttgttgtcccttctcttcaatttcacctgacttttgtt  6034500                                                                                                <----                                                  --------->ARR11(3)                     ------------                                              <---------ANAC46                           <-----------                                              <---------ANAC58                          <------------                     <----------DOF2          <---------ANAC58                          <------------                 <-----------GT1     --------->ZAT14------>ZmHOX2a(2)   <---------AHL20(2)      <----          --------->DAG2             <---------At4g35610       --------->DAG2           -------------         ---------->DOF2             --------->At4g35610     ---------->DOF2   <-----------RAV1(1)   tttgttttggataaagttttcacctttgtgtcttctctctgctctcttgtgtgatctatctgaaaaaggctgattttttttttgtgggtttctaaattag  6034600                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(2)                                                                                         <------ZmHOX2a(1)                                                                                         ============                                                                  --------->YAB1         ============   <---------ANAC46                                    <-------GAMYB                     ============   <---------ANAC58                                 <---------ARR11(3)                   ============   <---------ANAC58                                 --------->ARR11(3)               ---------->DOF2 -----TOE1(3)                                       --------->ARR14(2)         --------->ARR14(2) --->AGL15                                          <---------ARR14(2)      --------->ANAC58 ----AGL15                                         <------ZmHOX2a(1)        --------->ANAC46 -----AGL3                          ======================HOX2a_HOX2a       --------->ANAC58 -----AGL2                         <---------ARR11(3)  --------->TOE2(3)   --------->LBD16--------->GLK1(2) -----TOE2(3)         <---------YAB1<------ZmHOX2a(2) <---------MYB46(3)   <---------TOE1(2)------>ZmHOX2a(2) ---->AGL3        <----------DOF2  --------->ARR11(3) ------>ZmHOX2a(2)  --------->TOE1(2)--------->ARR14(2)   ggtttgtgtgagtttattgtctttctgattcgatgaagatcaagagttatagaggatcgttagagtgatcaaaatcccacgaattcacaaaggatccgtc  6034700               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             --------->ARR11(3)             <-----------ARR10             <---------ARR11(3)             --------->AGP1             <---------AGP1                                                               <---------PCF2             <---------ARR14(2)                                                          <------MYB46(1)             --------->ARR14(2)                                                          <------MYB83            <---------CCA1(2)                                                           --------->MYB55(2)           ----------->ARR10                                                            <---------MYB46(3)         <---------MYB52(1)                                                            <--------P        <-----------HVH21                                                              --------->ALFIN1      <-------TEIL                                                                    <---------MYB52(1)      ------>ZmHOX2a(2)                                                              <------MYB83     <------ZmHOX2a(2)                                              <------MYB83     <---------ZAT2    <---------ARR14(2)<---------At4g35610                          <---------MYB46(3)<------MYB46(1)    --------->ARR14(2)<---------LBD16                     <---------HSFB2a(2)       <---------AtMYB61    --------->AGP1    --------->At4g35610                <---------LBD16            --------->ALFIN1 ====================HOX2a_HOX2a                      <----------DOF2      <---------KAN4(2)      <-- ============HOX2a_HOX2a      <-------TEIL   --------->WOX13(1) --------->MYB52(2)  <---------MYB46(3) ===========HOX2a_HOX2a   <---------------AtSPL8 <---------At5g28300<------MYB46(1) --------->MYB55(2) =====================HOX2a_HOX2a         <-----------TGA1--------->HSFB2a(2) --------->MYB52(1) ----   ttcatagatccgtcagatctgttcagcggaggtacatacttcttcgtcattcactgctttctggattagttggtgagaataaacggctggtgggtctcgg  6034800                                                                                           <---------ZAT2                                                                                           <---------At4g35610   --------->At4g35610                                                                     --------->At4g35610   <---------ZAT2        --------->At4g35610                                               --------->ZAT2   <---------At4g35610   <---------At4g35610                                     <---------TOE2(3)   --------->ZAT2     <-------TEIL                                               <---------TOE1(3) -------MYB46(3)   <---------ZAT6       --------->HSFB2a(2)                  <---------At4g35610 ----->ALFIN1 <---------REM1(1)         <---------HSFB2a(2)                <-----------RAV1(2)<------   tgggaagctgaattggatgtagagttcatcagactatagcttagagaagaaaatgaagttttttgaatcgttttgctccagttgaggtttggaagctgca  6034900  Previous    Next  AGI:  At1g17545.1    Description:  protein phosphatase 2C-related / PP2C-related. similar to HAB2 (Homology to ABI2), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT1G17550.1); similar to hypothetical protein OsI_002530 [Oryza sativa (indica cultivar-group)] (GB:EAY74683.1); similar to Os01g0583100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043415.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 6033102    to: 6033901    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g17550.1    Description:  HAB2 (Homology to ABI2); protein serine/threonine phosphatase. similar to HAB1 (HOMOLOGY TO ABI1), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT1G72770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45673.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site; (InterPro:IPR000222) Range:  from: 6034355    to: 6037282    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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