Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ZAT14                                                                               <---------ZAT14                                                                               --------->REM1(2)                                                                             ------->MYC3                                                                             <-------MYC2                                                                             <-------MYC3                                                                             ------->MYC2                                                                            <---------ANAC46                                                                            --------->ANAC55(2)                                                 <---------ANAC58           <---------ANAC55(2)                                                 <---------ANAC58           --------->O2                                               --------->ARR11(3)           <---------O2        <---------DEAR3(1)               =============================================MYC_MYB        <---------MYB46(3)           <---------ANAC46                       <---------TGA1a   --------->ANAC55(2)               <-----------RAV1(2)                    --------->TGA1a   <---------ANAC55(2)          <-----------RAV1(1)                     <-----------HVH21         ---  <---------LBD16               =================RAV            --------->MYB46(3)  --------->ZAT18 ------->CCA1(2)     ------>ZmHOX2a(1)   <--------P           --------->WOX13(1)    <---------ZAT18--   gaaacacgggtcgatggccattcctactcacattatgttgcaggtaagagagcttgctcaaaaacaatcaccgatttcacgtgtagtgagcaaggctaga  6002500                             <---------ANAC46                             <---------ANAC58                     --------->MYB52(1)--------->ARR14(2)                  --------->ANAC58     <---------ARR14(2)                  --------->ANAC58     <-----------ARR10               <------ZmHOX2a(2)    <---------ANAC58         <------ZmHOX2a(2)   <---------ANAC58   <---------ANAC46      <---------MYB52(1)      <------ ------>ALFIN1<---------ARR11(3)    <---------ANAC58        ---------->ID1 --------->DOF5.7(2)<------ --------->GT1--------->ARR11(3)    <---------ANAC46  <---------AHL20(2) ----------->GT1   <---------   gtggtgaagagatcgagatcaagaaacggtttcttgtagcgtttctactctcgtataaatttgtagttttctgtgaggttaacttctctgtttttacttt  6002600                              <---------AHL20(2)                          --------->ATHB12                         <---------YAB1                   <------MYB83                   <------MYB46(1)                  --------->MYB46(2)                                              --------->HSFB2a(2)                  --------->MYB59                                            --------->HSFB2a(1)                  --------->MYB111(1)                                        <---------HSFB2a(1)                 <--------P   --------->AHL20(2)                             <---------HSFC1(2)    --              <---------TOE2(3)             ---------->DOF2                  --------->HSFC1(2)------ ----DOF2     <---------TOE1(3)      <---------GLK1(2)     --------->At4g35610    <---------HSFB2a(2) ---DAG2 <---------ZAT6  --------->ICU4     --------->ZAT14<---------At4g35610    <---------HSFC1(1) --GT1---------->ID1  <-------TEIL--------->YAB1   ---------->DOF2   <---------MYB46(3)  --------->CCA1(2)   tcgagtttgtagttttaaggtaggttcatgatttaaacagaatcactaaagtctaaaggtaaactgactggtgtttggaaatttctagatgatatgaaca  6002700                         ------>MYB46(1)                       <---------MYB59                       --------->AtMYB61           --------->ANAC58                    ------>MYB83                   --------->ANAC46                    ------>MYB46(1)         --------->ANAC46                  --------->AtMYB61    <---------ARR14(2)                                  --------->ANAC58            <---------ANAC55(2)<---------GLK1(2)   --------->ANAC58         <-----------HVH21  <----- ------->ZAT14    <---------MYB59      <---------GLK1(2)                   <----------DOF2 --------->ANAC58 --->ZAT6 <-----------GT1------>MYB83  --------->ARR14(2)         <---------TOE2(3)        --------->ANAC46   cttctctccatattactgaaccaaaccaaaccagattatcaaattcgcacaacaagacacatactactaagaattcactttcacataaatgaaacgcagc  6002800                                             <---------ICU4                                             --------->YAB1                                            <---------YAB1                              --------->ANAC58   --------->ANAC58                        --------->At5g28300                              --------->ANAC58   --------->ANAC58                       ----------->GT1                  --------->ANAC58          --------->ICU4                           --------->CCA1(2)                  --------->ANAC58        --------->YAB1                            --------->ARR11(3)                  --------->ANAC46      --------->ARR11(3)                    <----------DOF2       <---------DAG2 <------NtERF2     <---------ARR11(3)             <----------DOF2<-------TEIL -NtERF2<----------DOF2       --------->ANAC46  --------->YAB1  ---------->DOF2   <---------TOE2(3)   gtttcatacccttttgttaaacgcagcgtttcacgaaaacaagataataataagcatcgagatggaaaaaggcctttgggctttaagatacagtaaatgg  6002900                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(2)                  <------NtERF2                                             <---------ARR11(3)                 <---------ZAT18                                            --------->ARR11(3)                 --------->ZAT18                                            <---------ARR14(2)                 ------>NtERF2   <---------ZAT18                           --------->GLK1(1)               --------->ATERF1(1)          ------>ZmHOX2a(1)              <---------GLK1(1)        ------>ZmHOX2a(1)        --------->ZAT18                         <------NtERF2        <---------DAG2        <---------ANAC58                          --------->LBD16        <----------DOF2       <---------ANAC46                         --------->DEAR3(1)         <--     *TSS      <---------ZAT18<---------ANAC58                        <---------LBD16--------->REM1(1)   gactgtaatcctttttgggcgccctattacaggcgtgctctctctcctctctccatctatctccctctcttcgccggagatcgcccttcaccaattccac  6003000                                                  ----------->GT1                                              <---------AHL20(2)                                              --------->AHL20(2)                                             <---------WOX13(1)          --------->ATHB12                                      <---------GLK1(2)                  -------->HAHB4                                    ----------->ARR10                    <---------ICU4                                    <---------TOE2(3)                   <---------ATHB12                               --------->AtLEC2   <---------ZAT6    <---------AHL20(2)   <---------ZAT2                        <----------DOF2   <---------YAB1            --------->AHL20(2)<---------ANAC58      <---------ALFIN1  <---------DAG2--------->ARR11(3)        <---------YAB1        <---------ANAC58 ---------HVH21      ------>ZmHOX2a(1)<---------ARR11(3)   ----------->GT1     ------>ZmHOX2a(1)   tgtgagtcgcacatcaaatattcctactttttcatgctaagattttgatttattgttaaatcagttatatttaaatgattcctgcatttcgagctcgtct  6003100                                                                           <----------DOF2                                                                          <----------DOF2                                                                    <----------DOF2                                                                  --------->ZAT2                                                                  <---------ZAT2                                                                  --------->At4g35610                                                             --------->At4g35610         --------->ATHB12                               ---------->DOF2   <---------DAG2            <        <---------YAB1                 --------------------->WRI1 <---------At4g35610              --   <---------GLK1(1)            <-------TEIL         --------->ANAC46  <-----------------AGL1 <------   aatggaattcatgtttggaatcgatgtctcgacatacgtttttttgttcgattagacgtaaagagctcagctttcgccttttggcattcaaatttgttta  6003200                                          --------->YAB1                                          --------->TOE1(3)                      --------->AHL20(2)                                     <---------YAB1                              <---------AHL20(2)                             --------->At4g35610                               <----------DOF2   ----------->GT1           <---------At4g35610  <----------DOF2              <---------------AGL15 ---------ANAC46            <---------TOE1(3)---------->DOF2                   --------------->AGL15 ------->ATHB12      --------->AHL20(2)   --------->TOE2(3)              <-----------GT1 --------->WOX13(1) ---ZAT14            <---------AHL20(2) ------->TEIL        <---------LBD16<---------At4g35610   ctgagtggatatatatggtttgataaatttaagctaaatatgaatcttaaagctttatattcttcgggtttgattttagctcttttattagcaatctgaa  6003300                                                                             --------->GLK1(2)                                                                         <-----------GT1                         <---------AHL20(2)                           ----------->GT1                    <---------AHL20(2)                                --------->ANAC58 ------>ZmHOX2a(1)                   --------->AHL20(2)                                 --------->ANAC55(2)                --------->YAB1              ------->TEIL              --------->ANAC58 <----------DOF2            --------->ATHB12<---------TOE2(3)                     --------->YAB1    ---------->ID1   <XXXXXXXXXXXXXXXXXXXMIR773B*   <---------YAB1    <---------GLK1(2) <---------ANAC55(2)          <-   gttttttgtttgagttattgataaaatttttatgttattatctatgaactctctgattctgagtctattgataagtaacaatctttgtcctttactctct  6003400  Previous    Next  AGI:  At1g17460.1    Description:  TRFL3 (TRF-LIKE 3); DNA binding / transcription factor. similar to TRFL6 (TRF-LIKE 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G72650.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO45641.1); contains InterPro domain Telomere repeat binding factor (InterPro:IPR013127); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 5998807    to: 6002709    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g17470.1    Description:  ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding. similar to developmentally regulated GTP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G72660.1); similar to developmentally regulated GTP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G72660.2); similar to developmentally regulated GTP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT1G72660.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO45642.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ68135.1); similar to developmentally regulated GTP binding protein [Pisum sativum] (GB:AAB67829 Range:  from: 6002905    to: 6006398    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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