Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ------>ZmHOX2a(2)                                         --------->GLK1(1)                                         <------ZmHOX2a(2)                                        --------->ARR11(3)                --------->ZAT14         <---------ARR11(3)                <---------ZAT14         <-----------ARR10         --------->ANAC58               <---------ARR14(2)                    <------ZmHOX2a(1)         --------->ANAC58               <---------AGP1                   --------->REM1(2)       <---------ATERF1(1)             <---------CCA1(2)                --------->ALFIN1      <---------ZAT18             <---------YAB1                      <---------ANAC46              -      ----------->HVH21       <---------DAG2                       <---------RAP2.6(2)            <--    --------->At4g35610       --------->TOE2(3)                   <---------At5g28300            <---  <-----------RAV1(2)         --------->TOE1(3)       <---------YAB1  <---------ANAC58   <----------DOF2 <---------ATHB12          ------->GAMYB--------->ARR14(2)       <-----------GT1      =============== ------------>AGL1        --------->MYB46(3)         <---------GLK1(2)<---------ANAC58--------------- ->DOF2<---------PCF5     <---------MYB111(2)      --------->ICU4--------->MYB52(1)  <---------------   caaatcaggggaccccattgcagtatcaacaaccttatcacagatctcatggaatgattcttgtaagttacggcgtgtaaggacatgtcttcttttggca  5994700                       --------->LBD16                       ------>ZmHOX2a(1)                  <---------GLK1(1)               --------->LBD16              --------->ANAC46              <---------ANAC55(2)              --------->ANAC55(2)              --------->HSFB2a(2)              <---------HSFB2a(2)             <---------LBD16           <---------ARR14(2)           --------->GLK1(2)         <---------KAN4(1)         <---------HSFB2a(1)      --------->YAB1                  --------->ALFIN1         --------->MYB46(3)       --------->HSFB2a(2)   --------->ALFIN1         --------->HSFB2a(1)   <----------DOF2       --------->LBD16  --------->ALFIN1--------->GLK1(1)                 --------->HSFB2a(2) -------->At4g35610  ----------->RAV1(2)            <---------HSFB2a(2) <---------GLK1(1) ---------RAV1(2)<---------ARR14(2)        <---------MYB52(1) ---------->DOF2 ------At4g35610 --------->ARR14(2)   --------->GLK1(2) <---------REM1(1)    ------>ZmHOX2a(1)     <- ===================================================================MADS_MADS--------->LBD16       <- >AGL15  --------->KAN4(1)    <---------ANAC58      --------------->AGL15  ----------->RAV1(2)   <--- --AGL1 <---------KAN4(2)     <---------ANAC58      <-----------RAV1(2) --------->GLK1(1)   ---------   tcagatggggaacaatccggaactcctgaattgctttcagaatcagttagccttccaggtgtagcaaagtggagaactcctgaattgttttcagaatcag  5994800                                                                                                  <--                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                -----          --------->ALFIN1--------->At4g35610                                 --------->YAB1   <-----      ===============================RAV                              ----------->RAV1(1)      ------      <-----------RAV1(2)----------->RAV1(1)                       <<<<<<<<<GATA-4            <------ ----------GT1         <---------At4g35610                         <<<<<<<<<GATA-3   --------->ALFIN1 --------DOF5.7(2)     --------->At4g35610                         <<<<<<<<<GATA-1   <---------ANAC58 ------MYB52(1) ---------->DOF2                                    <<<<<<<<<GATA-2   <---------ANAC58 >GLK1(2) <---------REM1(1)                                      --------->WOX13(1)<---------ANAC46   ttaaccttgcaggtgtagcaaagtcagcatcagaaattgcaatactgtgttcgatggaggtctgagtcaatccaccagtatcatgaggtgtgccaaaatc  5994900                                                           --------->KAN4(2)                                                          <---------HSFB2a(1)                                                          --------->KAN4(1)       <-------TEIL                                       <---------KAN4(1) -------YAB1                                              --------->HSFC1(2) ----->TOE2(3)                    --------->At4g35610     <---------HSFC1(2) -----ICU4           <---------ZAT2                       --------->HSFB2a(1) ---->ATHB12         --------->ZAT2         ===============HOX2a_HOX2a ---->YAB1           --------->At4g35610    <------ZmHOX2a(1)    --------->PCF2 ----ATHB12          <---------At4g35610 <---------LBD16 <---------KAN4(2)   --------->HSFB2a(2) --->ICU4           --------->ANAC46<----------DOF2 <------ZmHOX2a(2)        <---------HSFB2a(2) ---ARR11(3)    <-----------GT1   <---------At4g35610--------->YAB1    <---------ICU4   attaatcggtacattgttttcccagctacgattttcagctttctcaggaaaccgatcagaacattcggacccagcattaccagaagtccaaactcgaaat  5995000                                         <----------DOF2                                      ------>NtERF2                                     --------->LBD16                                 ------->TEIL                         ----------->ARR10                <----------DOF2<-------TEIL               ---------->DOF2                        <---   actctagtcttcttgtgactttctgcctgtaaatgcatcccgacttttaaacaaatactataaagccgagagtagctcttcttcttgtcaattccaagtc  5995100                                                                    <---------------AGL15                               <----------DOF2                      --------------->AGL15                        <---------AHL20(2)                         ----------------->AGL1                       --------->AHL20(2)                   ----------->GT1                    --------->ICU4                         <---------TOE2(3)                  --------->AHL20(2)                   <---------ANAC55(2)      ----------->RAV1(2)     <---------DAG2          <-------TEIL ----------------->AG -------DOF2*TSS  --------->YAB1       --------->AHL20(2)  --------->DAG2                      <-----   tttcacatacctggtggaaataatatttaatgccttttcaaaaaaattcagccaaatacataaggtaataccaaaaactgtaaggcaaacccatcaaatg  5995200                                         --------->YAB1                             ------>ZmHOX2a(1)                           ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                         --------->AGP1-------->P                         <---------ARR11(3)      --------->AHL20(2)                         --------->ARR14(2)   --------->YAB1                         <---------ARR14(2)  <---------YAB1                    <----------DOF2  --------->MYB46(3)                --------->ANAC58 <---------At4g35610                                    <---------MYB52(1)      <-----------HVH21  --------->ARR11(3)<---------CCA1(2)          --------->At4g35610 ----ATHB12     --------->ANAC58 --------->At4g35610  <---------YAB1  <---------At4g35610   aatacctccatcacagccaagcctttagatccttcagcatcaaccatatcataaatttgattatctattggaagctccaaagtttgttctgttttttgaa  5995300                               --------->LBD16           <---------ARR11(3)                             <---------LBD16             --------->ARR11(3)                       <----------DOF2            --------->At4g35610          <------NtERF2                       <---------DAG2             <---------At4g35610--------->MYB52(1)                      <---------ANAC46        <----------DOF2      --------->MYB46(3)                <------ZmHOX2a(1)   ----------->GT1      --------->GLK1(2)  <------NtERF2       --------->LBD16<---------ANAC58     --------->ARR11(3)      <---------MYB52(2)          ------   ------>ZmHOX2a(1)  <---------ANAC58     <---------ARR11(3)    <-----------GT1       ----------->RAV1(2)   tactccttccgaattttaggagttgctttttcccagagtagttaaaatcttttgctgaaaatctttttaacaaacggaggcatcgttcaacctgcagaaa  5995400                                                                       ----------->GT1                                                --------->MYB52(1)     <---------ANAC46                                                ---------->DOF2       --------->ALFIN1                                           --------------->AGL15--------------->AGL15                                           <---------------AGL15<---------------AGL15                         --------->AHL20(2)=====================================MADS_MADS--------->ATHB12             <---------AHL20(2)          ----------->GT1       ----------------->AGL3  <---------TOE1(2)          <---------AHL20(1)          --------->GLK1(1)       ------>NtERF2           <---------AtLEC2          --------->AHL20(1)         --------->ARR14(2)       ----------->RAV1(1)--------->ARR14(2) ---->DOF2--------->AHL20(2)     <------ZmHOX2a(2)           --------->RAP2.6(2) <---------ARR14(2)   agacaatccaaatattttatagccaaataaaacagatcagaaatgctaaataaaggcaattggccaccatatgtggtgaaatgtattcgcatgatggaat  5995500                                                                           <------NtERF2                                                                          ------>NtERF2                                                                          ----------->RAV1(1)                                                                          ==================RAV                                                                         <---------ETT(2)                                                                         --------->DEAR3(1)                                                                         ----------->HVH21                                                                        --------->RAP2.3(1)                                                                       <---------ATERF1(1)                                                                       --------->LBD16                                                                      --------->DEAR3(1)                                                                      ------->GAMYB                                                                     --------->MYB46(3)                                                                     --------->DEAR3(2)                                                                    -------->P                                                                  --------->ETT(2)                                                                  <---------ETT(2)                              <---------ALFIN1              --------->ARR14(2)                  <---------DAG2--------->ANAC46            <---------ARR14(2)                  --------->TOE2(3)                         --------->GLK1(2)   ----------->RAV1(2)              <---------ZAT18 --------->AtMYB61            <---------GLK1(2)<---------MYB52(2)          <---------YAB1     --------->ANAC46 ------>ZmHOX2a(1) <-----------HVH21              ------   gtgatgcagattatagttcaccttattgttcaccacagcatcaaactcctctactacatgagaatctgtcaaccggcgacaaacctgatgtaatccaaaa  5995600  Previous    Next  AGI:  At1g17450.1    Description:  ATP phosphoribosyltransferase -related. similar to transcription factor-related [Arabidopsis thaliana] (TAIR:AT1G59453.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G59077.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G58766.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45637.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66433.1); contains domain ""Winged helix"" DNA-binding domain (SSF46785) Range:  from: 5988636    to: 5995112    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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