Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->ATHB51                    <---------ICU4                    <--------HAHB4                   --------->ICU4             ---------->ID1         <---------ANAC55(1)         <---------ANAC58         --------->ANAC55(2)         <---------ANAC58                        --------->ANAC58         <---------ANAC46           <---------AHL20(2)         <---------ANAC55(2)        --------->AHL20(2)        --------->MYB52(2)          <---------ICU4 <------ZmHOX2a(1)                       <---------ARR14(2)       <-----------GT1              --------->ATHB51                                       --------->ARR14(2) ---------YAB1     <---------YAB1  --------->ICU4--------->ANAC58 <---------ATHB12    ----------->GT1 ------MYB52(1)  --------->YAB1    <---------AHL20(2)--------->At4g35610         ---------->DOF2   --   ttatttttgttacttgtcttcataattacaaggagaaattatttctgaagtaaggaactgacttacaaatgaagaaacaatacaaaagtagtaaatctgg  5956800                                                  ------>NtERF2                                                  <------NtERF2                                                 --------->RAP2.6(2)                                                 ------>NtERF2                                                <---------ANAC46                                                <---------DEAR3(1)                                                <---------ANAC58                                    <                                                <---------ANAC58                                    <                                                <---------RAP2.6(2)                                 <                                                <---------ATERF1(2)                                <-                                                --------->ATERF1(2)                              <---                                               --------->RAP2.6(3)                             <-----                                               --------->ATERF1(1)                             <-----                                             --------->ALFIN1                                  ------                                           --------->O2                                  <---------ARR14(2)           --------->MYB52(1)--------------->AtSPL3                ----------->GT1     <---------MYB46(3) --------->ANAC58            <---------------AtSPL8            ---------->DOF2   ----------->RAV1(2)< --------->ANAC58            --------------->AtSPL8   --------->AtLEC2          ------->TEIL   ------ -------->DOF2              ---------->DOF2<---------O2 ---------->DOF2    ---------->DOF2 ------>ZmHOX2a(2)   caaaagcaagtagtaacagaactgagtttttaaagtactattaccaagtggcggccatgaaagaagaaagagataataaaagtacctggtggatcgaatt  5956900    <---------WRKY12                                                              --------->At4g35610    <---------WRKY38(1)                                                         --------->MYB46(3)  --------->ANAC46                                                             --------->RAP2.6(3) --------->LBD16                                           <---------MYB111(1)--------->MYB52(1) ---------ANAC58                                           <---------MYB52(2)----------->HVH21 ---------ANAC58                                          --------->HSFC1(2)<---------MYB52(2) ---------ANAC46                                         <-----------ARR10 --------->ANAC58 --------LBD16                              ==================================HOX2a_HOX2a --------GT1                                <------ZmHOX2a(2)       --------------->AGL15 ----HSFC1(2)                              <---------ARR11(3)       <---------------AGL15 ----HSFB2a(1)                      --------->ANAC46   --------->LBD16     --------->ANAC55(2) --->HSFC1(2)                       --------->ANAC58  --------->ANAC46     --------->ANAC46 ---------LBD16                     --------->ANAC58  --------->HSFB2a(2)  --------->ANAC58         < --->HSFB2a(1)           <----------DOF2   --------->ARR11(3)-------->P------>ZmHOX2a(1)       ------   ttccgggcaacgcgagactggaatcgggttttcggtataagccaagatcaatgtttccgaaactacccttctccttcaagtaacggctgagcaaactaca  5957000                          <-------GAMYB                          <---------ANAC58                          <---------ANAC58                         ------>NtERF2                                                             <-                      ------>NtERF2                                                                <-                      <---------ATERF1(1)                                                          <-       --------->DAG2 --------->LBD16                  ------>NtERF2                               --      ---------->DOF2<---------DEAR3(1)               --------->ANAC46                            ---  --------->LBD16    --------->ANAC46            <---------ANAC58                           <-------- <---------ANAC46   <---------LBD16              <---------ANAC58                         <---------ALFIN1 ---------LBD16--------->GLK1(1)            --------->ATHB12                           <-----------GT1 --->REM1(1)   <---------GLK1(1)           <---------YAB1                           <---------GLK1(1)   tctccgggtaaagtcagatttctccggcgcttgtgccttagcattttcattgctcgacgacatgttgttgtttattgagaagaaagaattctccacactt  5957100                                                         --------->LBD16           --------->GLK1(2)                            <---------ANAC46         <---------RVE1(1)                              <---------ANAC58         <---------CCA1(1)                          <---------ANAC58        <---------ARR11(3)                     <---------ANAC58        --------->ARR11(3)                     <---------ANAC46     <---------TOE2(3)                         <---------ANAC58    ---------->DOF2                           <-------TEIL --------DAG2                              <------MYB46(1) --------------AGL15                       <---------MYB46(3) ---------DOF2<----------DOF2          <-----------RAV1(1)----------->GT1 ------------->AGL15               <----------DOF2  <---------ANAC58 -------------->AGL3     <----------DOF2   <------MYB83 <---------ANAC58 -ALFIN1--------->ARR14(2)    <----------DOF2 <---------MYB46(3)                        --------->At4g35610   actttttaaagatattctttatctcttcttttcttttctttttgttggtgcgtggattgcgcgtaaaatggaagagtacaagaggctactagctcaatag  5957200                                                                            <---------AHL20(2)                                                                           <---------AHL20(2)                                                                --------->YAB1                               --------->GLK1(2)              <---------TOE2(3)                          <---------ATHB12                  --------->AHL20(2)                      ------------>CBF                      <---------AHL20(2)        <---------DAG2                      --------->MYB46(3)                   <---------AHL20(2)         <----------DOF2                     --------->ANAC58                --------->YAB1      --------->YAB1                     --------->ANAC58      --------->YAB1  --------->AHL20(2)     <------ZmHOX2a(1)     *TSS            --------->ANAC46   <----------DOF2 --------->AHL20(2) --------->AHL20(2)   ctcatgtgtttataaactcattcacccaataagtttctgtgactttaatagcctctcataaattaatgaaaacaaaaataaataggaactttttagtttc  5957300                                                                   --------->MYB46(3)                                                                  --------->ANAC58                                                                  ------------------------>ANAC81                                                                  --------->ANAC58                                                                 ------->GAMYB                                                           <-----------GT1                                                      <---------AHL20(1)             <---------AHL20(2)                       --------->AHL20(1)             --------->AHL20(2)                   --------->AHL20(1)             --------->AHL20(1)                   <---------AHL20(2)             <---------AHL20(1)                   <---------AHL20(1)             --------->ARR11(3)                   --------->AHL20(2)------->GAMYB             <---------ARR11(3)                --------->YAB1   <---------MYB111(2)               ---   <---------ARR11(3)                         <---------ATHB51  <---------MYB55(2)                ---   --------->ARR11(3)                         <---------ATHB12  --------->MYB46(3)               ----   <---------AHL20(1)               <-----------GT1   --------->AHL20(2)                        -----   --------->AHL20(1)             --------->AHL20(2)  <---------AHL20(2)               <---------ARR11(3)   ttaaaaatatttcaatatattgtgaccaaaatagaattaaacttctcaataataaatttattaacaacaaccaaaaaaaccaaaaaacaaatcttacata  5957400                          <---------KAN4(1)                                                         -                          --------->KAN4(1)       <---------------AGL15                           <--                     ----------->GT1              --------------->AGL15<---------ANAC46           <--         --------->AHL20(2)                    <-----------GT1   <---------ARR11(3)             ----- ------>ANAC58<---------------AGL15      ------->TEIL            --------->ARR11(3)             <---- ------>ANAC58--------->YAB1          --------->ANAC58          <---------CCA1(2)   <---------KAN4(2) ----->DAG2   --------------->AGL15   --------->ANAC58 ---------->DOF2 <---------ZAT6          <----- ----->DOF2   ====================================================MADS_MADS   ---------->DOF2  ------   aagccatgagattatatcatatttagtaatattccatcgcatgcatttttaactagttaaagaactatatctagtgtgaagaaaggaattttcatccatg  5957500                               --------->YAB1                               --------->ATHB12                               -------->ATHB1                                   --------->ATHB12                              <---------ATHB12                                 --------->AHL20(1)                              <---------YAB1                                   <---------AHL20(1)   --------->YAB1           --------->WOX13(1)                                 <---------AHL20(2) -------->YAB1       --------->YAB1                                    --------->REM1(1) -------YAB1      --------->YAB1                 <<<<<<<<<GATA-1   <------MYB83--------->AHL20(2) -------WOX13(1)  --------->TOE2(3)       --------->AHL20(2)       <------MYB46(1) ---->ATHB12     ----------->GT1        --------->ANAC58          --------->MYB111(1) -----ICU4      <---------TOE2(3)       --------->ANAC46          --------------->AtSPL8            - ----YAB1     <---------AHL20(2)        --------->ANAC58          <---------------AtSPL3        ----- --->ICU4    --------->AHL20(2)<---------ICU4 <---------AHL20(2)  <---------------AtSPL8       <-----   attaatagtaagaaaattaatgttaataatccatcattgtgcaagtaatttatctattgttttatgagttggtacaacaaatttattgccctgtcttatc  5957600                                                                                           <---------AHL20(2)                                                                                          --------->AHL20(1)                                                               --------->GLK1(1)          <---------AHL20(1)                                     --------->ZAT14    ------->GAMYB                    <---------AHL20(2) -------->AHL20(2)    <---------ANAC58                 --------->MYB46(3)            --------->AHL20(2) ---->YAB1            <---------ANAC58                --------->At4g35610       <---------DAG2      - ----YAB1             <---------ANAC46               --------->MYB52(1)         <----------DOF2    <-   ataaaaatatgttcacctcttgtttcttgtttggcacagtttagttgtctaccatcaacggccagatttcaaaattggactacttttttatatatatttt  5957700  Previous    Next  AGI:  At1g17380.1    Description:  JAZ5/TIFY11A (JASMONATE-ZIM-DOMAIN PROTEIN 5). Identical to Protein TIFY 11A (TIFY11A) [Arabidopsis Thaliana] (GB:Q9LDU5;GB:Q8LAR9); similar to JAZ6/TIFY11B (JASMONATE-ZIM-DOMAIN PROTEIN 6) [Arabidopsis thaliana] (TAIR:AT1G72450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65210.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 5955481    to: 5957205    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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