Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ---------->DOF2                             --------->AHL20(2)                                             ---------                             <---------AHL20(2)                                       <---------WOX13(1)  ------->GAMYB           ------>MYB46(1)                  --------->AHL20(2)       --------->ATHB12 --------->ANAC58         ------>MYB83               --------->LBD16               <---------YAB1 --------->ANAC58       <---------MYB59        --------->GLK1(1)                 ------>ZmHOX2a(1) ------->MYB52(1)       ------->GAMYB          <---------GLK1(1)             --------->ARR14(2) --------ID1           --------->MYB46(3)  --------->HSFB2a(2)               --------->GLK1(2) ---->ANAC46          ------>MYB83         <---------HSFB2a(2)               <---------ARR14(2) ---->ANAC58          -------->P<---------TOE2(3)   --------->LBD16          --------->ARR11(3) ---->ANAC58          ------>MYB46(1)     <---------LBD16  <---------AHL20(2)<---------ARR11(3) --->DOF2         ------------------------>ANAC81   <---------LBD16 ------->TEIL <----------DOF2   gcaacgaaaattcaatcgaattccaaccaaattaaaggaaattatctggaaatccctggaattatatatcaacctagaaaatcctttgattgaaccgaga  5919700                                                        --------->CCA1(2)                                                       <---------AHL20(1)                                                --------->TOE2(3)                                          <---------ARR11(3)                                          --------->ARR14(3)              --------->ANAC58            <---------ARR14(2)              --------->ANAC58    <---------ZAT2--------->HSFB2a(2)          --------->ATHB12        --------->ZAT2<---------HSFB2a(2)              --------->ANAC46  --          <--------ATHB1          <---------At4g35610  --------->AHL20(1) --------->HSFC1(2)    -----          --------->YAB1          --------->At4g35610 --------->AHL20(2)  <---------HSFC1(2)    -----         <---------YAB1------>MYB83       --------->ARR14(2)            --------->ARR14(2)    -------    ----------->RAV1(1)------>MYB46(1)    <---------ARR14(3)            <---------GLK1(2)  <--------- -->GT1--------->YAB1<---------MYB59      --------->ARR11(3)            <---------ARR14(2)<---------ARR14(1)   aaattgcaacaatgataggcaaaccaaactcgaatcagctgcaatatcttccataaatatataagaaaatcacagatacttccacataaaccgtatcaaa  5919800                                                                  <----------ID1                                                              ---------->DOF2                                                           --------->ANAC58                                                           --------->ANAC58                                                           --------->ANAC46                      <---                                                         ---------->DOF2                   ---------- -------->DOF2                                          --------->ARR14(2)               <---------ARR11(3) ---->ANAC58                                            <---------ARR14(2)           ---------->DOF2 ---->ANAC58                                            <---------GLK1(2)          --------->YAB1---- --->DOF2                                             --------->LBD16             <---------ATHB12 --ARR10             --------->GLK1(2)             <-----------------AGL1  <----------ID1--------->ARR11(3)   gcaaagtcttaaacttgttagagattccaattgcaatttcaagcttcgctcttacccagaaacgcaaaggaacaagaacaacaaatcaaaagataatgca  5919900                                      --------->ATHB51                                      --------->ATHB12                                      <--------ATHB1                                      <---------ICU4                                      -------->HAHB4                                     --------->AHL20(2)                                     <---------ATHB51                                     <---------AHL20(2)                                     --------->ICU4                                --------->ANAC58                                               <-----                                --------->ANAC58                                            <--------                                --------->ANAC46                                            ---------                            --------->CCA1(2)                      ----------->RAV1(2)      <--------                            <------ZmHOX2a(2)                      <---------At4g35610      --------- ----------->ARR10         <---------ARR14(2)            --------->ARR11(3)                 <-------- ------At4g35610           --------->ARR14(2)        ---------->DOF2                        <-------- >DOF2    ---------->DOF2  --------->AGP1 <---------------------WRI1                        --------- ----->At4g35610          --------->At4g35610      <---------YAB1  --------->At4g35610    -----------   gcgaagaaattccaaagtagataacatcagatccaagaaataattgcgaaaatatgaaagaaattgatcacctgaatcgaattttgtcgatgaagatttt  5920000                                           <--------P ------GT1                                --------->REM1(2) -GLK1(2)                               --------->LBD16 >ARR14(3)                            --------->LBD16 -ARR14(3)                            ------>NtERF2 >ARR11(3)                            <---------LBD16 -ARR11(3)               <----------DOF2<---------MYB46(3)                  <------MYB83 -ARR14(2)               <---------DAG2<---------ANAC46                     <------MYB46(1)------>MYB83 >ARR14(2)     <---------MYB52(1)   <---------LBD16            <---------MYB59    *TSS     ------>MYB46(1) >ARR10       --------->TOE2(3) ------>ZmHOX2a(1)   ---------->DOF2       XXXXXXXXXXXXXXXXXXXX>MIR778   ctctcttggggtttctcgttaatctcactttctccttctccgcgggtagagagagaaagaattagcctaactcgcgcttggtttatctaaaccgaacaaa  5920100                                                                            <---------ANAC58                                                                      <---------AHL20(2)                                                                     --------->ATHB51                                                                     <---------ICU4                                                                     <---------AHL20(2)                                                                    --------->ICU4                                                                  --------->YAB1                                                                  -------->HAHB4                                                                  <--------HAHB4                                                                  --------->ATHB51                                                                  <--------ATHB1                                                                  <---------ICU4                                                                 --------->ICU4                                                                 <---------ATHB51                                                                 <---------YAB1                                                                 --------->AHL20(2)   <----------DOF2                                             <---------YAB1    --------->YAB1         <---------DAG2                                         <-------GAMYB        <---------AHL20(2)    ------->TEIL                                        ----------->GT1   --------->ATHB12  --------->ANAC55(2)                                        --------->MYB52(2)<--------ATHB1    <---------ANAC58                                       <-------TEIL  ------------>CBF--------->AHL20(2)                                  <---------LBD16    <------ZmHOX2a(2)--------->AHL20(1) ---------->ID1                           <-----------GT1<---------MYB52(1) --------->AHL20(2)   <---------ZAT18                     ----------->GT1  <---------MYB52(1) --------->ICU4     <---------ANAC46                   <------------CBF  <---------MYB52(1)  <---------ATHB12   <---------ANAC55(2)                 <---------MYB52(1) --------->LBD16<------ZmHOX2a(1)<---------YAB1--------->ZAT18  <-   attcaacacaagttagaccggtattgtataatccattccggttcgttattagaggatcaatgatttaataattattttgcgtaatgcacttttccctatt  5920200                        --------->ARR14(2)                        <---------ARR14(2)                       <---------GLK1(2)                   ---------->DOF2  <---------MYB46(3)               --------->YAB1      --------->ARR14(2)           <---------ALFIN1        <---------ARR14(2)           --------->AtMYB61      <---------MYB52(1)                                         --------          --------->MYB46(3)     <---------DEAR3(2)                                         >>>>>>>>>TBF1        --------->ANAC46<-----------ARR10           ---------->ID1                   --------->At4g35610        <---------ALFIN1--------->GLK1(2)           <-----------GT1               --------->At4g35610 ---------DOF2<---------ATHB12 <---------LBD16     <-----------GT1          --------->AHL20(2)   tctttattctccaccactcatcaaagaatctgtgccggttcttggaatcaatttttccttctcttcatgaaatataaaaaaaatagctgcagaagaagaa  5920300                                               <-----------GT1                                    <---------ANAC58                                    <---------ANAC58                                    --------->At4g35610                                    <---------ANAC46                                <-----------HVH21                   <----------ID1<---------MYB52(1)                 <---------ZAT6<---------MYB46(3)     <-----------------AGL1          --------->ICU4     <---------At4g35610      <-----------------AGL2       --------->ICU4        --------->At4g35610  <----------DOF2 --->GT1--------->ATHB12 --------->MYB52(1) --------->AHL20(2)       --------->ZAT6             <----   aaaaaactagtgattagtagtgagacaaaacagctgttacctgcaattttttcttttctgaaattggacttacactaatacctccaaattccaaagttat  5920400                                                                         --------->ZAT18                                                                       <-------MYC4                                                                       ------->PIF5                                                                       ------->MYC3                                                                       <-------PIF4                                                                       <-------MYC3                                                                       <-------MYC2                                                                       ------->MYC2                                                                       ------->MYC4                                                                       <-------PIF5                                                                       ------->PIF4                                                                      --------->ANAC55(2)                                                                      --------->TGA1a                                                                      <---------ANAC55(2)         <--                                                                      <---------ANAC58        <------                  --------->DAG2                                      ===============================        <---------ICU4                          --------->LBD16       <---------ANAC58      <--------        --------->AHL20(2)                     --------->LBD16        <---------TGA1a----------->HVH21       <---------AHL20(2)                     <---------LBD16    <---------GLK1(1) <---------ANAC55(2)       --------->AHL20(2)                 <---------GLK1(1)      --------->GLK1(1) --------->ANAC55(2)     --------->YAB1                 <----------DOF2   --------->ZAT6 ------------>OsbHLH66  --------- -----YAB1       ---------->DOF2    ============================================bZIP_DOF--------->MYB46(3)   gcttaaaaaataatttcaataaagttaagtttcagcctcttttgagttccccgataacagtaggcagaaatcacgtgctctaatcacatgaccaccatct  5920500                         <------MYB83                         <---------ANAC55(2)                         <------MYB46(1)                        --------->MYB111(1)       ---------->ID1                        --------->MYB59    <---------ARR11(3)                        --------->MYB46(2) <---------AGP1              --------->ATHB12      ---------->DOF2  <---------MYB55(1)  --------->ARR11(3)          --------->YAB1 -------MYB52(1)--------->ANAC55(2)        --------->ARR14(2)         <---------YAB1                - ---CCA1(2)     <---------ANAC55(2)        <---------ARR14(2) <---------ARR11(3)                    < ================bZIP_DOF--------->ANAC55(2)  <----------DOF2--------->YAB1                     <---- -ALFIN1       <-------TEIL               <---------CCA1(2) <---------YAB1                <---------ANAC58 >AtMYB61  ----------->GT1    ----------->GT1------>ZmHOX2a(2)--------->ARR11(3)          <---------ANAC58   cttagtttcaaagcagttacatgagttaggtaatgtgaatatgtggatctttgtctctacatatgatattgtatcattgtttcaatgtagatgcttgagg  5920600  Previous    Next  AGI:  At1g17280.1    Description:  UBC34 (UBIQUITIN-CONJUGATING ENZYME 34); ubiquitin-protein ligase. similar to UBC33 (UBIQUITIN-CONJUGATING ENZYME 33), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G50430.1); similar to UBC33 (UBIQUITIN-CONJUGATING ENZYME 33), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G50430.2); similar to ubiquitin conjugating enzyme 2 [Lycopersicon esculentum] (GB:AAK62819.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 5916864    to: 5920082    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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