Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                   --                                                                                              <<<<<<<                                                                                           --------->bZIP60(1)                                                                                           --------->ANAC55(2)                                                                                           --------->ANAC46                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC55(2)                                                                                           <---------bZIP60(1)                                                                <------ZmHOX2a(1)         <---------TOE2(3)                                   ------------>CBF<---------ANAC55(2)                   <---------DOF5.7(2)                               <----------DOF2     --------->ANAC55(2)                  ----------->HVH21                        <---------MYB52(1)         --------->ANAC55(1)                  --------->WRKY12                       --------->TOE2(3)           --------->ANAC58                   --------->At4g35610         >>>>>>>>>>>>>>>>>LFY  ------>ZmHOX2a(1)   --------->ANAC46            --------->YAB1 ------- ------->CBF<------------CBF <---------ICU4        --------->ANAC58         ------>ZmHOX2a(1)--------   caattttctcataccattggtccatcgttaatcctttctcaatttcattttctacgtaacatgagaggagaccaagtcctatgagaacagttgacgtaac  5903700                                                       <-----------------------TaNAC69(2)                                                <------MYB46(1)                                                <------MYB83   <---------RVE1(1)                                                <---------ANAC46                                               --------->MYB46(2)    <-------GAMYB                              --------->MYB52(2)<----------DOF2   <---------MYB46(3)                          --------->MYB59<---------ARR11(3)  <--------P                                   --------->MYB111(1)    --------->MYB46(3) ---------MYB46(3)                            <---------MYB55(1)------>ZmHOX2a(2) -------->MYB55(2)                           <---------MYB52(1)<------ZmHOX2a(2) ------->ALFIN1                          <---------At5g28300  --------->ARR11(3) <<<<<<<<<<LFY           <------ZmHOX2a(1)  <-------GAMYB     --------->AGP1                    <---- -->MYB52(1)       ---------->DOF2     ----------->HVH21    ----------->ARR10  <----------DOF2  <---- --->HVH21   ----------->GT1     <---------ZAT6--------->MYB111(2)  <-----------GT1        ----------   agtggttgttaagttaagttaaaaagaggaagctagtgagagtgaccgttaggtagagaagtgagatctttaaccactcttctttctctctctctctgct  5903800                                                    --------->YAB1                                                 <---------ICU4                                                 --------->YAB1                                                 <--------ATHB1                                                <---------ATHB12                                                --------->ICU4                                                <---------ATHB51                                             <---------------AGL15                             <-----                                             --------------->AGL15                    ------>ZmHOX2a(1)                                            ------------>CBF  <------------CBF  --------->ARR14(2)                                            ----------------->AGL1              <---------ARR14(2)         <----------DOF2                    ----------------->AGL3              --------->GLK1(2)    ---------->ID1                          <-----------------AGL1              <-----------ARR10---- -----DAG2                                  <-----------------AGL2             <---------GLK1(2) ---- ------DOF2                                 <-----------------AGL3       <-----------RAV1(2)  ------- ----------->WRI1    <---------ZAT6    <---------YAB1      ------------>CBF <------ZmHOX2a(1)<-------   tttttcgtcgtctttcacatctactgttcgcaaactctcttatgcttccaataatggtgataccaattgagacttgcaggagaatctcctcttctccaca  5903900                                                           <---------TOE1(3)                      <--                                                           <---------TOE2(3)                    -----                                                     --------------->AGL15                   --------                                                     <----------DOF2                      --------->KAN4(2)                                                     <---------------AGL15               --------->KAN4(1)                                                 <---------GLK1(2)                       <---------KAN4(1)                                                 <---------ARR14(2)                      <----------TaMYB80 ----ALFIN1                         ------------>CBF<-----------------AGL3              <---------KAN4(2) ----->ANAC58              <---------DEAR3(2)    --------->ARR14(2)                     ---------->TaMYB80 ----->ANAC58         <---------AtMYB61       ------>ZmHOX2a(1)    ------>ZmHOX2a(1)--------->LBD16 -->ZAT14             <---------HSFB2a(1)     --------->LBD16  <---------GLK1(1)    ------>ZmHOX2a(1) --ALFIN1<-----------HVH21<---------MYB46(3) <---------LBD16 <------ZmHOX2a(1)     <---------ANAC46   ctctatcaactggtcagccatggaatggtcgtttcagtttcaatattcctggattctttttaaggattcctgtttctcttctgttcctggtatattctta  5904000                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                          <---------ANAC58                                                                  --------->ANAC46                    ------>ZmHOX2a(1)                    <---------ARR14(2)   <---------ARR11(3)                  ------>ZmHOX2a(2)                      --------->ARR14(2)   --------->ARR11(3)                 <------ZmHOX2a(2)                      <------ZmHOX2a(1) <---------ANAC58     ------      --------->ICU4--------->LBD16                     ==============================HOX2a_HOX2a --------ID1    --------->ARR11(3)                   <------NtERF2--------->ANAC58<---------YAB1 ---->MYB52(1)  <---------ARR14(2)            <---------ICU4      --------->ANAC58------>ZmHOX2a(1) ->TOE2(3)      --------->ARR14(2)     <----------DOF2  ===============================HOX2a_HOX2a---   acgacgaaattagtatcggatcctggtaatacattttgaagcttttaagtatggccgaggatttggacaagccattgctggatcctgatactttcaacag  5904100                                      --------------->AGL15                                      <---------------AGL15                                  <---------ARR14(2)            <------MYB46(1)       --------->ARR14(2)            <------MYB83          <---------ZAT14            ----------->GT1       --------->ZAT14                     --------->DAG2       --------->ATHB12       --------->ZAT6--------------->AtSPL8   ---------->DOF2 ->GAMYB   --------->MYB59  <-----------GT1<---------YAB1 <---------YAB1                            - ------->DOF2           <----------DOF2 <---------YAB1   --------->TOE2(3)     <-----------GT1-------   aaaaggaattgatttggtaaatgttccttttaactgtatactcttattagtacttgaattcttagtggcaaaaaagggttttgacccttcttgagcttga  5904200                                                                                                   --                                                                                                  ---                                                                                                 <---                                                                                             <------MYB46(1)                                                                                             <------MYB83                                                                     --------->At4g35610    ---------                                 --------->TOE2(3)                  --------->GLK1(2)   <---------CCA1(1)            <---------MYB52(1)   --------->TOE2(2)                <---------GLK1(1)     <---------RVE1(1)   <---------ARR14(2)            --------->TOE1(2)                <---------At4g35610  <---------ARR11(3) ---------->GT1   <------ZmHOX2a(1)                          <---------LBD16           <---------ARR14(2) ---->HVH21<-------GAMYB        <---------ANAC55(2)    <----------DOF2                 --------->ARR11(3)   cagggtatattgccgttggaggaggtttttgaatacctaagaacatcgcctcaagggcttttatctggagatgctgaagagagattgaagatatttggtc  5904300                                                                                 --------->DEAR3(1)                                                                                 ------->GAMYB                                                                                 --------->RAP2.6(2)                                                                                --------->MYB46(3)                                                                                <---------MYB55(2)                                                                                <------------AtMYB77                                                                                --------->DEAR3(2)                                                                              --------->MYB52(1)  ------->GAMYB             --------->YAB1                                 <---------At4g35610      - ------->MYB52(1)           <---------ICU4                            --------------------->WRI1   <- --->ZmHOX2a(1)    --------->ANAC55(2)                              --------->ARR11(3)             <- ------MYB59       <---------ANAC55(2)             ------>ZmHOX2a(1)<---------ARR11(3)  --------->AHL20(2) >MYB59            ----------->GT1           <---------ZAT6        --------->YAB1--------->ANAC46----   ctaacagacttgaagagaaacaggtaataaacatgacattcttcttagtgttcctgccaattgtctctattatcttgtgctaaccgccatttaaaacaac  5904400                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                   <---------At4g35610                                                                   --------->At4g35610                              <---------TOE1(2)                    <---------HSFB2a(1)                              <---------TOE2(2)                    --------->HSFB2a(1)       <------ZmHOX2a(1)      <---------TOE2(3)                    <---------ZAT2    <-----------RAV1(2)  --------->GLK1(2)                         --------->HSFC1(2)  --------->CCA1(2)      --------->ICU4                            <---------HSFC1(2) -------->YAB1    ----------->GT1                             <---------TOE2(3) --------YAB1  <---------ARR14(2)                  <-----------HVH21  --------->ZAT2 --------ATHB12--------->ARR14(2)           <---------GLK1(1) <---------HSFB2a(2) ----->YAB1    <---------GLK1(2)      <---------ANAC46        --------->HSFB2a(2)       <---------ZAT18   aatgatacaggagaacagatttgtgaaattcttaggttttatgtggaatcccttgtcatgggttatggaagctgctgcattgatggccattgccctcgct  5904500                ----------->RAV1(1)                --------->AtMYB61                ------->GAMYB               --------->MYB46(3)     --------->ANAC58                                         ------->TEIL     <---------ANAC55(2)                                  --------->DAG2     --------->ANAC55(2)                                 ---------->DOF2             ----------->GT1     --------->ANAC58                                <---------YAB1         ----------->GT1   aatagtcaagtaagacaaccacagttttgctaccattttccatccatgagtgtttatgaaaaagcaccttgaaactcatggtgaaaatggtattacagag  5904600  Previous    Next  AGI:  At1g17255.1    Description:  other RNA Range:  from: 5901490    to: 5903612    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g17260.1    Description:  AHA10 (AUTOINHIBITED H(+)-ATPASE ISOFORM 10); ATPase. Identical to ATPase 10, plasma membrane-type (AHA10) [Arabidopsis Thaliana] (GB:Q43128); similar to AHA8 (ARABIDOPSIS H(+)-ATPASE 8), ATPase [Arabidopsis thaliana] (TAIR:AT3G42640.1); similar to AHA11 (ARABIDOPSIS H(+)-ATPASE 11), ATPase [Arabidopsis thaliana] (TAIR:AT5G62670.1); similar to AHA4 (Arabidopsis H(+)-ATPase 4), ATPase [Arabidopsis thaliana] (TAIR:AT3G47950.1); similar to plasma membrane proton ATPase [Nicotiana plumbaginifolia] (GB:AAD46188.1); similar to P-type ATPase [Petunia x hybrida] (GB:ABC59935.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80223.1); conta Range:  from: 5904051    to: 5908891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version