Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <----------ID1                              ------->TEIL                                       <---------AHL20(2)           ----------->GT1   <---------CCA1(2)                            <---------YAB1           -- --------ATHB12         <---------ARR11(3)   <----------DOF2      <---------HSFB2a(2)----------->GT1   aatcaaaaacgaatggcaaaacacaagttctgtatctaatacattttctttcaaacaaataacaaatactagaaatatgattttaaaatgtgacaaaaaa  5851500                                                                                             --------                                                                                             <-------                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                     <-------MYC3                                                                    ---------->DOF2  ------->MYC3                                                                    ==========================bZIP_DOF                                                                   --------->WRKY18(1)   <---------ANAC46                                                            <---------AHL20(2)       <-------MYC2----                                             --------->ANAC58    --------->WOX13(1)  ------->MYC2<---                                    --------->AHL20(2)     --------->AHL20(2)       <---------TGA1a        <---------YAB1              <---------AHL20(2) <---------YAB1              ------->TEIL------ -------->DOF2               <---------YAB1  --------->ANAC58--------->WOX13(1) <---------MYB52(2)   aaaaagaaatatgattttaaaacaatttgtttttataaaaaaatggtaagcaagttgatgaataaatcagtcaagctcatcgacgaacgtggcatgatct  5851600                    <---------ANAC46                    <---------ANAC58                    <---------ANAC58                   <------NtERF2                 --------->ALFIN1                <-------MYC2                ------->MYC2                <-------PIF5                ------->PIF5               <---------ANAC58               <---------ANAC55(2)               ===============================================bZIP_DOF               --------->TGA1a               <---------TGA1a               --------->ANAC55(2)               <---------ANAC46                                  <----------DOF2               <---------bZIP60(2)                        <---------ARR14(2)               <---------O2                               --------->TCP15(1)               <---------ANAC58                           <---------PCF2                ----------->GT1         <-------TEIL                                    <------MYB83                ---------->DOF2 ->ARR11(3)<-----------TGA1                              <------MYB46(1)        <---------At4g35610 --ARR11(3)<-----------HVH21                            <---------MYB46(3)   <-------TEIL ----->ANAC55(2)------->MYC3                           --------->ALFIN1<-----------GT1 --------->DAG2 ------ANAC55(2)<-------MYC3                       ---------->DOF2  <---------------AtSPL3 >ZmHOX2a(2)   --------->O2                 <-----------HVH21 ------>ZmHOX2a(1) --------->At4g35610   cgtaatagacattcgtcacgtggcgtttagctatttgatcaaaacatgtcagacaaagtgggtcctgcattttgtacgattcatctcaaaaggtgatatc  5851700                                                                        --------->PCF2                         <---------MYB46(3)                            <---------PCF2                         <------MYB83                                  --------->TCP20                         <------MYB46(1)                               --------->TCP15(1)                        <---------AtMYB61                             <------MYB83                       <---------MYB52(1)                             <------MYB46(1)                      <-------GAMYB                                   <---------DEAR3(2)                     <---------MYB46(3)                              <---------MYB46(3)            --                 ----------->HVH21                                   --------->MYB59   <-------GAMYB<                 ------>ZmHOX2a(1)                                  --------->ALFIN1 <---------TOE2(3)               --------->YAB1                                 <----------DOF2   <----------DOF2<-----               <---------ICU4                           --------->AHL20(2)  <---------TOE1(2) <------              <---------ATHB12       <---------YAB1     --------->YAB1<---------TCP15(2)<------------             <---------ARR14(2) <-----------GT1  <----------DOF2 <---------AtMYB61   <---------TOE1(3)   gagtctcacatctccaatcctgaccgttggtttataactcttattagacgactttcaataaaaactttaggtgggtccctcgtttttagggttgtactgt  5851800                              ------->TEIL                           --------->ANAC58                           --------->ANAC58                                          --------->YAB1    <----------DOF2     <---------ZAT14                                           --------->YAB1   <---------DAG2       --------->ZAT14                                          <---------YAB1 ------->MYB46(3) <---------DOF5.7(2)                                         <---------AHL20(2) ---------ALFIN1 --------->ZAT14                                              --------->AHL20(2) ------HVH21     <---------ZAT14                                  <------ZmHOX2a(2) <---------YAB1 ---ZAT6         <---------ZAT18   <-----------GT1      <---------AHL20(2)    <---------AHL20(1)  --- ---AtSPL3       <---------WRKY38(1)                    <-----------GT1       --------->AHL20(1)  ---   caccacctttcagtttcagtgaacgctgcacgaattttaactacaattagacgactatttacatttcgatccataactattttattatcatattttagac  5851900                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                     ----------->RAV1(2)                    -------->ATHB1                                                   --------->At4g35610                    <---------ICU4                                                   --------->ZAT2                    --------->ATHB51                                                 <---------At4g35610                   <---------ATHB51                                                  <---------ZAT2--                   <---------ATHB12                                                <-----------RAV1(2)                   --------->ICU4   <---------RVE1(1)                        --------->At4g35610 <---           <------------CBF        <---------GLK1(2)                      ===========================         <---------AHL20(2)        <---------ARR14(2)     ------>ZmHOX2a(2)  <---------At4g35610 <---        --------->AHL20(2)   <----------DOF2  --------->ARR14(2)          <------ZmHOX2a(1)     <----        <---------AHL20(2) <----------DOF2    <---------ARR14(2)<----------DOF2    --------->MYB46(3) ------>ANAC58   --------->WOX13(1)--------->ARR14(2)     =======================HOX2a_HOX2a   ------ ------>ANAC58 ------------>CBF<---------LBD16*TSS  <---------At4g35610   ===========================   actcaagtttttaaattgccaattattcgctctttcggattttttgtggatttgagatgatccctgcttcaatggaggaagctcaccagctggagtcgag  5852000              --------->MYB52(1)              <---------DOF5.7(2)       <---------MYB59   --------->WRKY12   --------->WRKY38(1)   ----------->HVH21                                        --------->GLK1(1) --------->At4g35610                                        <---------GLK1(1) ----ZmHOX2a(2)                                          --------->LBD16 ------>CCA1(2)           --------->MYB52(1)            <---------HSFB2a(2) ------>ARR14(1)       --------->HSFC1(2)               --------->HSFB2a(2) ----->ARR14(2)        <---------HSFC1(2)               --------->LBD16 ----->AGP1  <---------WRKY45                          <---------HSFB2a(2) ---->ZmHOX2a(2)      --------->ANAC58                 --------->HSFB2a(2) ------ARR11(3)--------->At4g35610                     <---------LBD16 ====HOX2a_HOX2a      --------->ANAC58          <---------RVE1(1)                             ------- ------ARR14(2)<---------At4g35610             <---------ARR11(3)                             ------- -----GLK1(1)<---------WRKY38(1)              <------ZmHOX2a(1)   <----------DOF2             <------ ----->ARR10 <---------WRKY12          <------ZmHOX2a(1)--------->ANAC46              ------>MYB83 =====HOX2a_HOX2a------->GAMYB    --------->ALFIN1    <---------LBD16                 ------>MYB46(1)   atccgatgacctaagtcaacggagaagctactggagatggaggaagcaggattttttcccggaattctcttttcagagcttctctacctacaaatcagct  5852100               <---------ALFIN1                                                ---------->DOF2               --------->ANAC46                                             --------->LBD16               --------->ANAC58                                             <------NtERF2       ==============================================bZIP_DOF               ------>NtERF2       --------->TGA1a                                                     --------->RAP2.3(2)       --------->O2                                                        --------->DEAR3(1)       <---------O2                                                        --------->RAP2.6(2)     <---------ALFIN1                                                     <------NtERF2   --------->LBD16                                     --------->SPL7    <---------ATERF1(1)   ------>NtERF2          <------ZmHOX2a(2)          <---------SPL7     <---------ATERF1(1)  --------->ANAC58       --------->ARR14(2)         <---------ANAC58    --------->ANAC58  --------->ANAC46       <---------ARR14(2)         <---------ANAC46    --------->ANAC58  --------->ANAC58     --------->DEAR3(1)           <---------ANAC58    --------->ANAC46 <---------LBD16------>NtERF2                      --------------->AtSPL3<------NtERF2 -->At4g35610  --------->ANAC58                    <-------TEIL       --------->ATERF1(1) -->ZAT2    <---------ZAT18------>ZmHOX2a(2)    <---------At4g35610  ------>NtERF2 ---At4g35610<---------ALFIN1             <----------DOF2  --------->ZAT2------>NtERF2              <   ctctccgccacttgtccacgcctcgccgatcgtcttctctctcgctcttccgatgcgtacgagctcgatgcagcccgccgcgaaagcgagaaccctatgc  5852200                                                            --------->ALFIN1                                                  <---------DEAR3(2)                                                  <------MYB83                                                  <------MYB46(1)                                                  <---------MYB46(3)         <-----------RAV1(2)                                            <-------GAMYB --------->ALFIN1 <-----------HVH21   ------                                           <-----------RAV1(1)  <---------ANAC58               <-----                             <---------ANAC58 <-----------RAV1(1)       <---------ANAC55(2)    <-----                             <---------ANAC58 <---------MYB46(3)<---------ANAC58<------ZmHOX2a(1) <---------MYB52(1)<---------ANAC58  <---------AtMYB61<---------ANAC46  --------->ANAC55(2)    ------ -------GAMYB      <---------ANAC58<----------DOF2--------->MYB55(2)   <---------LBD16     --------->ALFIN1   gtcgttgtctcacttggtgggacttgctctggcttagctttggttctgttgttggttcgggtgtgttcgtgatcacgggtcaggaggctcgagttggagc  5852300        ----------------------->TaNAC69(2)       <-------GAMYB      <-----------RAV1(1)    <---------At4g35610                                                                            <-   ------>ZmHOX2a(1)                                  <---------ZAT14                              -- --->ZAT2            --------->ANAC58                 --------->ZAT14                   <-----------HVH21 ----ZAT2            --------->ANAC58    <---------AtLEC2                              ------>ZmHOX2a(1) ----At4g35610       --------->ANAC46   --------->ZAT14         <---------At4g35610    <-----------RAV1(1) --->At4g35610     ------>ZmHOX2a(1)    <---------ZAT14     <---------MYB52(1)     --------->GLK1(2)<   tggtcctgctgttgttctctcctacgctatctctggtgtctctgcattgctctcagttctctgttatgctgagtttggagttgagattcctgtcgctgga  5852400  Previous    Next  AGI:  At1g17120.1    Description:  CAT8 (CATIONIC AMINO ACID TRANSPORTER 8); cationic amino acid transmembrane transporter. similar to CAT5 (CATIONIC AMINO ACID TRANSPORTER 5), cationic amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G34960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41927.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78727.1); contains InterPro domain Cationic amino acid transporter (InterPro:IPR015606); contains InterPro domain Amino acid permease-associated region; (InterPro:IPR004841); contains InterPro domain Amino acid/polyamine tran Range:  from: 5851946    to: 5853948    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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