Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     ----------->GT1                                                                                   <------MYB83                                                                                   <------MYB46(1)                                                                              <---------YAB1                                                                            <---------AHL20(2)                                                                            <---------ICU4                                --------->ANAC58                            --------->ATHB12                                --------->ANAC58                            --------->ATHB51                                --------->ANAC46                            -------->ATHB1                                --------->ANAC55(2)                         -------->HAHB4             --------->AHL20(2) --------->ANAC55(1)                        <---------ATHB51        <---------YAB1          <---------ANAC55(2)                        <---------ATHB12       <-----------GT1<---------ICU4                  --------->AHL20(2)   <---------YAB1      --------->YAB1  --------->YAB1       --------->ATHB12                --------->ICU4  --------->AHL20(2)--------->ARR11(3)    <---------YAB1               <---------MYB59          <----   gaaatgaattatcaatataaaaaatcatggtttcacgtaatttgatgatttgtttttaaaatactccctagagcctaattattgtaggtaaaaaacttat  5828700                            <---------ARR11(3)                            --------->ARR11(3)                           --------->YAB1                 ------>ZmHOX2a(2)                --------->CCA1(2)                <------ZmHOX2a(2)               --------->AGP1               <---------AGP1               --------->ARR11(3) <---------YAB1               --------->ARR14(2)--------->AHL20(2)           --------->KAN4(2)               <---------ARR14(2)<---------AHL20(2)          <---------GLK1(1)                 <-----               <---------ARR11(3)<---------AHL20(1)          <----------TaMYB80       --------->CCA1(2)              <---------GLK1(1) --------->YAB1              <---------ARR14(2)--------->AHL20(1)    <---------AHL20(2)   <---------TOE2(3)                  --------->ARR11(3)<---------AHL20(1)  ---   --------->AHL20(2)   --------->YAB1                      --------->ARR14(2)<---------ARR11(3) ---- -----YAB1   ----------->ARR10 <---------YAB1     ----------->GT1       --------->TOE2(3)      ------   tagtataaaatttgtgagatctggattaatgatattataattgtcttgaaaccagaaaaatggatattctctaatctcaaaatatttgatacgagttaga  5828800                       --------->ALFIN1                      ------->MYC4                      <-------MYC3                      ------->MYC3                      <-------MYC2                      ------->PIF5                      ------->MYC2                     <---------ANAC55(2)                     ================================================bZIP_DOF                     <---------TGA1a                     --------->TGA1a                     --------->ANAC55(2)                     --------->O2            <--------P<-------MYC4            ===================MYC_MYB           <---------MYB52(1)        <---------ATHB12----------->GT1       --------->MYB52(1)       ------>MYB46(1)<-------PIF5                               <-----------GT1       ------>MYB83  <---------O2    <---------GLK1(2)           ---------->ID1 ----At4g35610 <------ZmHOX2a(1)    <---------At4g35610         <-----------GT1 ------>MYB52(1)    ------------>OsbHLH66<---------YAB1   <----------DOF2                         --- ------->HVH21<------MYB46(1)       --------->At4g35610   <---------DAG2                      ------- --->At4g35610<------MYB83----------->HVH21             ------->TEIL                      <---------AHL20(2)   tgacggaccaatcggtaggaaacacgtggtgacatttcagcttctgattacaacgatggacttttttttccctctctctctaatttgtatattgaattaa  5828900                                                 --------->LBD16                                                 <------NtERF2                                   --------->GLK1(1)                                   <---------GLK1(1)---------->DOF2                             --------->ARR14(2)  ------>NtERF2                             <---------ARR14(2) --------->ANAC58                             --------->GLK1(2)  --------->ANAC58    --------->MYB52(1)  --------->ANAC58        --------->ANAC46 ------->DOF2           --------->ANAC46       --------->SPL7                           <---------bZIP60(2) -->AHL20(2)            --------->ANAC58     <---------SPL7                <---------ARR11(3)   aaaagaaaacggacacacacacacacacacaaatctgaaatctctctcgtccgccaaaggtcgagttttgagagcgagttcttacttctgatgtggtttt  5829000                                                                          <---------AHL20(2)                                                                         *TSS                                                                     <----------DOF2          ---------->DOF2                                          ---------->ID1        --------->MYB46(3)                                     <---------ANAC58        <---------MYB55(2)                                     <---------ANAC58                  <---       --------->ANAC58                                  --------->AHL20(2)                   <------       --------->ANAC58                  ------>ZmHOX2a(2)   --------->ARR11(3)  <---------AHL20(2)       --------->ANAC46           --------->DAG2         <---------AHL20(2)     <---------AHL20(2)     <---------ALFIN1            ---------->DOF2        ----------->TBP  <---------AHL20(2)   -------   gtctcgtccacccaaagaaaatcaacacaaaaaaaaaaagggatcgattcacaaacttataaatttcttgtcttttttattttttatttttctgaaaatt  5829100                                                                                  <----------DOF2                                                                          --------->GLK1(2)                                                                         <---------ARR14(2)                                                                         <---------GLK1(2)           --------->MYB46(3)                                            <---------ARR11(3)          --------->ANAC58          <----------ID1                       --------->ARR14(2)          --------->ANAC46        ---------->DOF2                        --------->ARR11(3)          --------->ANAC58   <---------At4g35610                        --------->HSFB2a(1)        <---------ALFIN1     --------->At4g35610                        <---------HSFB2a(1)      --------->ANAC46   <-----------HVH21                              --------->HSFC1(2)      <---------ALFIN1   <-----------TGA1        <---------YAB1         <---------HSFC1(2)  --------->AtLEC2      --------->TGA1a         <<<<<<<<<<<<<<<<<LFY   ----------->ARR10 --------GT1            <---------TGA1a      --------->TOE2(3)       --------->LBD16               -- ---ARR14(2)            --------->O2----------->GT1                <---------HSFB2a(2)             <- -->ARR14(2)            =====================bZIP_DOF            --------->ARR14(2)             -----   tgccatacacacacccaatctctctctcgtcagccaaaaagaaaaaaacttaacattggactctcagtttccgaagattcttctctttggactctcagtt  5829200                                                               <---------ARR14(2)                                                        --------->TGA1a                                                        <---------O2                                                        --------->O2                      <---------O2                    <----------DOF2                     <---------TGA1a               <-----------HVH21                    ==============================================bZIP_DOF           --------->bZIP60(1)                 <---------RAP2.6(3)                <-----------TGA1                 --------->TGA2(1)                --------->RAP2.6(2)                 <-----------HVH21                <---------bZIP60(1)        <---------YAB1                             <---------bZIP60(1)               <---------TGA2(1)        --------->ICU4                             --------->bZIP60(1)          --------->YAB1 ------->HSFB2a(2) <-----------------AGL3   --------->DAG2     --------->ARR14(2) <---------YAB1 --------HSFB2a(2) <-----------------AGL2  =======================bZIP_DOF     --------->ICU4-------- ---->GLK1(2)<-----------GT1               ---------->DOF2  <XXXXXXXXXXXXXXXXXXXXMIR851-5P--------->O2   tctgaaacttattattagccgtctttttttggtttgggtttgcctaaaagttgtcgtcacttgtggattttggtctgagaaatgatgatgtcatgtcgga  5829300                                                                                                  <--                                                                                                  <--                                                                                                 <---                            <---------YAB1                                                       <---                 <---------ZAT14                                                                <----        <---------ANAC58   --------->KAN4(2)                                                  -------        <---------ANAC58  <---------ICU4                  <---------GLK1(2)                  <------- ->ETT(1)<---------SPL7  <---------YAB1                <------NtERF2                   <---------MYB52(1)   atatagacttgggtacgagtgttcttgatcattcttgtagctcttcttcaacaagtcgtcgattcttgtttggcaattcttcgaagaccgtttgtatgat  5829400                                                                                                  ---                                                                                                  ---                                                                                                 ----        --------->ZAT2                                                                        <------        --------->At4g35610                                                                   -------     <---------At4g35610           ------>NtERF2                                             <-------  <------NtERF2         <------MYB46(1)   --------->CCA1(2)                --------->TOE1(2) <------- ----MYB46(1)          --------->MYB59   --------->ARR14(2)       ------>NtERF2             --------- ----MYB83  <-----------RAV1(1)   <---------DEAR3(1)              --------->LBD16  <---------ARR14(2) ------MYB46(3)      >>>>>>>>>SARD1--------->LBD16               <---------ANAC46  --------->ARR14(2) ------AtMYB61       XXXXXXXXXXXXXXXXXXXX>MIR870                 <---------RAP2.6(2)       <--------- -----WOX13(1)       >>>>>>>>>CBP60g     <---------ARR14(2)     <---------LBD16    <---------GLK1(1) -->ATHB12  --------->ALFIN1     <---------LBD16              <---------ARR14(2)   --------->GLK1(1) --YAB1--------->GLK1(2)<------MYB83   ----------->ARR10  <---------At4g35610  --------->YAB1<-------   tggtggcagaagctgtgttggaaatttggtatttctccggcgagatttggctacttgcagagctgttccggctaaatccaaggagaattctctggtcaac  5829500                                                                               --------->ANAC55(2)                                                                               <---------ANAC55(2)                                           --------->ATHB12                <-------GAMYB                                         <---------WOX13(1)               <------MYB83      <---------DAG2                   --------->ATHB12                   <------MYB46(1)  --------->MYB46(3)                  <---------YAB1                      <---------MYB46(3) ------>At5g28300                   <---------ANAC46                      ----------->GT1 ------>DOF5.7(2)                   <---------ANAC58                    <--------P --->GAMYB                          <---------ANAC58                   <-------GAMYB ---DOF5.7(2)                   <-------GAMYB                         <------MYB83 -->MYB52(1)                   <---------MYB46(3)               <---------TOE1(3) --WRKY38(1)                  <---------TOE2(3)       <----------DOF2 <------MYB46(1) --WRKY12                     <---------YAB1       --------->GLK1(2)  <---------MYB46(3)         ---- >WRKY18(1)            <-----------------AGL2<---------WOX13(1) <---------TOE2(3)<---------AHL20(2)<- --HVH21     <---------At4g35610<---------ANAC58  <---------GLK1(2)  --------->MYB59        <-------- --WRKY45    --------->At4g35610<---------ANAC58<---------TOE2(3)    <---------AtMYB61    --------->YAB1   ggtaaccaatttttcagcagaactatctgattttggttgtgtgattgattgagattctttgattttgaggtttggttggttaagtaattgaatcatgttt  5829600  Previous    Next  AGI:  At1g17050.1    Description:  SPS2 (SOLANESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ trans-octaprenyltranstransferase. similar to SPS1 (SOLANESYL DIPHOSPHATE SYNTHASE 1), dimethylallyltranstransferase/ trans-octaprenyltranstransferase [Arabidopsis thaliana] (TAIR:AT1G78510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39509.1); contains InterPro domain Polyprenyl synthetase; (InterPro:IPR000092); contains InterPro domain Terpenoid synthase (InterPro:IPR008949); contains InterPro domain Solanesyl diphosphate synthase (InterPro:IPR014120) Range:  from: 5829073    to: 5831336    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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