Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ANAC58                                 <---------STY1(1)                                 --------->STY1(1)                             --------->DREB2C(2)                             --------->DEAR3(1)                            --------->ORA47(2)                            --------->DEAR4(2)                            --------->DEAR3(2)               <---------ICU4                         --------->MYB46(3)                  --------->ATHB12               <---------ZAT18------>NtERF2                  <--------HAHB4          <---------ANAC46 ------->TEIL<---------ANAC58      --------->YAB1          <---------ANAC58 <---------ATERF1(1)              <---------ATHB12          <---------ANAC58<---------ALFIN1      <---------ICU4                --------->TOE2(3)     <-----------RAV1(1)--------->ANAC58       <---------ATHB12      <----------DOF2             ----     <---------bZIP60(2)--------->ANAC46<---------DAG2      --------->ICU4    --------->TOE1(3)  <--- -------MYB52(1)        --------->ANAC58<----------DOF2   --------->YAB1      --------->YAB1    <----   attagttatgtggctggctcactctcacgcaccgcctaggggcttttccatcattctctctaatcatttcactttggtaatcttaatctatctatgcgac  5817200              --------->ANAC58              --------->ANAC58                                                  --------->At4g35610          ------->GAMYB                                                        --------->RAP2.6(2)         --------->MYB46(3)     ---------->DOF2                              --------->ZAT2    ----------->GT1           <---------YAB1                                 <---------ZAT2    --------->YAB1         <---------YAB1                                    <---------At4g35610 ----------->AGL15    <---------AHL20(2)                           --------->MYB52(1)     <----------DOF2 ------------AGL15    --------->AHL20(2)               <----------DOF2       --------->At4g35610  --- -------------AGL1   --------->AHL20(2)       ------->TEIL        <---------AHL20(2)   <-----------GT1   tccaaatggtaaccacaagaaaaattaatatgatgaaagctagagatgaatcaggctctttagtctaattaatggattcagcagccaaattactttagaa  5817300                                           <---------ZAT14                                         --------------->AtSPL8                                        <---------ANAC58                                   <---------MYB46(3)  --------->YAB1                                   --------->ATHB12   <---------YAB1                               <---------AHL20(2)     ----------->GT1               --------->YAB1                              <---------YAB1        <---------ICU4                  <---------ICU4                            <--------HAHB4 --------->ZAT18                         --------->ICU4                            --------->YAB1 <---------ZAT18                        --------->AHL20(1)                            <---------ICU4 --------->ZAT14                       --------->YAB1                            --------->ATHB51        --------->YAB1             --------->AHL20(2)                           --------->AHL20(2)      --------->ICU4     ------>ZmHOX2a(2)        <----------DOF2    --------->ICU4<---------------AtSPL8      --------->GLK1(1) --------->YAB1        <---------DAG2 <---------YAB1   <---------ANAC58            --------->ARR11(3)<---------YAB1 ------>AHL20(2)       --------->ICU4   <---------ANAC46            <---------ARR11(3)----------->GT1   taaaatccaactttatgtctgtgtaatgaataattaatggttgagtgtacaaaataatgaaaattgttgtgatctccaaaaaaaaataatgaaaatatga  5817400                                                                                                   --                                         <---------AHL20(2)                                  <-------              <---------AHL20(2)        <---------ARR11(3)                                   <-------              --------->AHL20(2)        --------->ARR11(3)     --------->AHL20(2)            <-------         ----------------->AGL3         <---------AHL20(1)     <---------AHL20(2)            <-------    ------>ZmHOX2a(1)                --------->AHL20(2)       --------->AHL20(2)       --------->ATHB12  ----------->RAV1(2)          --------->YAB1    ----------->GT1      ------------>CBF<-------TEIL---   gttctcctgataccatttatatagagtctaaaatcacaagtatatatttagaagtaaatttcaaattaatctaacaatgaaacaaaaattcatttgcgtg  5817500                                                  <------------CBF   <---------DAG2                               --------->ICU4   <----------DOF2                             --------->At5g28300 ------->MYB46(3)                    <---------ANAC58 --AtLEC2                            <---------ANAC58                                            <--- --ANAC46                  <----------DOF2  --------->At4g35610                                 <---- --ANAC58                  <---------DAG2   <---------At4g35610                                 <---- --ANAC58              <---------ZAT14 <---------ZAT6                           --------->YAB1 ------ ---->TEIL     <----------DOF2       <---------ANAC46       *TSS   --------->AHL20(2)   ----------->ARR10   aaccgctttctctacttctttagactgaactttataggtgagtgtgagcagtaattgtagttctatccattatatgcacaaataataggttagatttggc  5817600                                                                                    --------->At4g35610                                                                                    <---------At4g35610        <---------ANAC58                                     --------->ANAC58  <-------PIF5        <---------ANAC58                                     --------->ANAC58  --------->LBD16    <----------DOF2       <---------ANAC58            <------NtERF2            ------->PIF5 -------DOF2              <---------ANAC58          --------->RAP2.3(3)       <---------ANAC46 -----ANAC58            <-----------GT1          --------->ANAC58            <---------LBD16 -----ANAC58      <----------DOF2                --------->ANAC58        <---------GLK1(1) ---->ID1   --------->REM1(1)                  ---------->DOF2   ---------->DOF2--------->ALFIN1   ttttagctttgcctacatctcttttttttcttgtttcatccaaggagaagaaagcccccatggaagccaaagaagaaaccccgtggagctctattttagt  5817700                                                    --------->CCA1(2)                                                   --------->ARR14(2)                                                --------->HSFB2a(2)                                             ------>ZmHOX2a(1) <---------YAB1                                         --------->ARR14(2)<------MYB46(1)                    <---------TOE1(3)    <---------MYB52(1)<---------ANAC46                    <---------TOE2(3)  <---------HSFB2a(1) <------MYB83                 <---------REM1(1)     --------->HSFC1(2)<---------------------WRI1          <-------          <------ZmHOX2a(1)        --------->ANAC58<---------ARR11(3)                 <------NtERF2         --------->LBD16           --------->ANAC58<---------ARR14(2)                 --------->ATERF1(1)       <-----------RAV1(2)     --------->ARR11(3)--------->LBD16               --------->ZAT14 <-----       <---------LBD16<------ZmHOX2a(1)--------->HSFB2a(1)--------->MYB59  --------->MYB52(1)<-------   tccttctgttcaggagatggtgaaggataagatgatcacgaccgttcctcccagatatgttcggtatgatcaagacaaaactgaagtcgtcgtccatgat  5817800                      <---------ATHB12                    --------->ANAC46                <------ZmHOX2a(2)               --------->ARR14(3)               <---------ARR14(3)               <---------ARR11(3)                          <---------ZAT18               --------->ARR11(3)                          --------->WRKY38(1)               --------->ARR14(2)                          --------->WRKY12               <---------ARR14(2)                          --------->ZAT14              <---------GLK1(1)                         <---------ANAC46        --------->ARR14(2)                              --------->DEAR3(1)        <---------ARR14(2)                            ------>NtERF2<---------TOE1(3)       --------->GLK1(1)                             --------->DEAR3(1)       <---------CCA1(2)                             ------->GAMYB <---------TOE2(3)              ---    <------NtERF2------>ZmHOX2a(2)                  --------->MYB46(3)                  <---------ANAC46 --YAB1<---------GLK1(1)                            --------->DEAR3(2)                  <---------ANAC58 ----GLK1(2)  --------->GLK1(1)        <---------MYB52(1)--------->LBD16                <---------ANAC58 --ATHB12   --------->LBD16       ------->TEIL     <---------At5g28300              <----------DOF2   tctggcctcatatccgagatccccatcatcgacatgaatcggttgtgttcttctaccgccgtggactctgaggttgagaaactcgactttgcttgcaaag  5817900                                                                       <---------At4g35610                                                                   --------->ALFIN1                                                                 <---------ANAC58                     --------->TOE2(3)                           <---------O2                   --------->ARR11(3)                            <---------ANAC46             --------->AtLEC2                                    <---------bZIP60(2)                -             --------->ANAC46                                    <---------ANAC58          --------->AtLEC2             --------->ANAC58                                  --------->MYB52(1)          --------->ANAC58             --------->ANAC58                                  ------>MYB46(1)             --------->ANAC58            --------->LBD16                                    ------>MYB83                --------->ANAC46           <---------LBD16       <---------DAG2               --------->MYB55(1)      <-----------GT1        <-----------GT1          <----------DOF2              ----------->HVH21<---------YAB1  ------ ------>GLK1(2)    <---------ARR11(3)  <-----------GT1       <---------MYB59 <-----------GT1   ------   aatatggatttttccaggcaaaatctcaaacttcactttttttacaaaattatctatgttagacctaacgtggagcttattacccttgtttccatgcaag  5818000                 <---------ANAC55(1)                 <---------ANAC46                 <---------YAB1                                                                     -       <---------AHL20(2)                                                                           <      <---------AHL20(2)     <---------ATHB51                  ---------->DOF2                      -      --------->AHL20(2)     --------->ICU4                  <<<<<<<<<MYB98                         < -------->YAB1   <---------ANAC55(2)             <---------ANAC58                         <---------ANAC58 --->ANAC58      <---------ANAC58                <---------ANAC58                         <---------ANAC58 --->ANAC58      <---------ANAC58  ----------->GT1          --------->TOE2(3)         <----------DOF2   tatcagaattaaatagattacgtttgatgaaattattcagaaaaaatcgtttcttacaactatgttaaagccaaaatggagcctaaaactttccgtttca  5818100  Previous    Next  AGI:  At1g17010.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to SRG1 (SENESCENCE-RELATED GENE 1), oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT1G17020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70478.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 5817560    to: 5819345    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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