Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------AHL20(2)                                                                        <---------AHL20(2)                                                                        --------->AHL20(1)                                                                        --------->AHL20(2)                                                                    <---------AHL20(1)                                                                    <---------AHL20(2)                                                                   --------->AHL20(2)                                                                 --------->TOE2(3)                             <---------ETT(1)                   <---------ICU4                       <---------AHL20(2)                       <--------HAHB4                   <---------AHL20(2)                ---------->DOF2--------->AHL20(2)    <---------ATHB12   --------->AHL20(2)    --------->YAB1    --------->ICU4                 <------ --TEIL            --------->AHL20(2)     <----------DOF2      <---------YAB1       <----------DOF2   attgcaatctttgtaaaccaattttttaaatccgaccatatcaactttcatcaaacaaagaagtgatcattaaatttaatgacatacttttatattctca  5806900                              <------ZmHOX2a(2)                        -------->P                       <-----------GT1                 <---------AHL20(2)                 --------->AHL20(2)                <---------ATHB12              --------->AHL20(2)              --------->WOX13(1)   <----------DOF2      ----------->GT1                       <------             <---------AHL20(2)   <---------DAG2    ---------->DOF2       <----------DOF2  <-------TEIL ---YAB1 <---------AHL20(2)  <---------ARR11(3)--------->AHL20(2)       <---------YAB1---------->DOF2   ttttcatacatttattcaattaatcttaccagatcaccttttcatcaaataaaaaaaagagtttataggtttttatctttgtttcaacaaaagttcatca  5807000                                                                        <---------DAG2                                                                        <----------DOF2                                                                 <---------MYB52(1)                                                              <------------MYB.PH3(1)                                                             <---------At5g28300                                                            <-----------GT1                              --------->AHL20(2)            --------->MYB52(1)                              <---------AHL20(2)          <---------MYB52(2)                       <x                           ----------->GT1               --------->ANAC55(2)              <---------MYB52(1)                   <---------AHL20(2)                    --------->ANAC46       xxxxxxxxxxxxxxxxxxxxx                  --------->YAB1  --------->AHL20(2)     --------->ANAC58       <----------DOF2  ----   <---------YAB1--------->AHL20(2)      <----------DOF2 --------->ANAC58    <-----------GT1     <--- ---At4g35610--------->AHL20(2)   <---------AHL20(2)--------->GLK1(1)<-----------GT1  <xxxxxxxxxxxxxx   gcgttatagttgttttaaaataaaaatgctagttaattaatcgcttcttgtcagaattcaagtaaccgtttatacttttttactttgcatccgttttcca  5807100                                                                                          <xxxxxxxxxx                                                                                        --------->HSFB2a(2)                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         <-----------GT1<---------HSFB2a(2)  <---------ANAC58                                                      ----------->HVH21--------->ETT(2)  <---------ANAC58                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ANAC46                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              --------->DAG2  <xxxxxxxxxxxxxxxxxx xx>smallRNA(si3)                                                ---------->DOF2<----------DOF2 ----->ANAC46                            ----------->RAV1(1)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------ALFIN1    <---------YAB1  ----------->GT1               xxxxxxxxxxxxxxxx>smallRNA(i)        <x xxxxxxxxsmallRNA(si3)     ---------->DOF2                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxx   cactgcttgttttgtatttttcatagaaaaaaaggaagaaaaacaacataagtttatcaactacagaaaaagttgtgaccttctttgtttctcgacatca  5807200                                                                              <---------MYB52(1)                                                                             --------->TOE2(3)                                 <---------ANAC58                            <-------GAMYB                             <------------CBF                               ----------->GT1xxxxxxxxxx                            --------->ATHB12                                ------>ZmHOX2a(2)                            <---------ICU4                                 <------ZmHOX2a(2)        x                           <---------YAB1     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        ===========                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <---------ARR11(3)     <---------ANAC58 --------->AHL20(1)   <---------AHL20(2)                       --------->ARR11(3)     <---------ANAC58 <---------AHL20(1)  <---------AHL20(1)                      <---------CCA1(2)       ----------->RAV1(2)<------------CBF  --------->AHL20(2)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->ARR11(3)  <---------AHL20(2)                    <---------AHL20(2)       <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->DOF5.7(2)  xx                  <-----------TBP<---------ANAC58             xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xx               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)---------->DOF2              <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------ARR14(2)      xxx              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <----------DOF2   <---------ARR11(3)      <-- xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ARR11(3)     <xxx xxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxx xxxxxsmallRNA(si3) --------->AHL20(2)   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ARR14(2) xxxxxxxx xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------ZAT18    xxxxxxxxxxxx xxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ANAC46      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxx   tatatagagcaaaatgctttatttatatcttcattgcgtccatacatagcctgacttactttgaaaatattgtgcagatcgttaattaatttgaaagaag  5807300                    --------->ALFIN1                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   ------->PIF4                   <-------PIF4                   <-------PIF5                   ------->MYC2                   ------->PIF5                   <-------MYC3                   ------->MYC4                   <-------MYC4                   ------->MYC3                  --------->O2                  <---------O2                  ==================bZIP_DOF                  <---------TGA1a                  --------->TGA1a                 ------->TEIL                 ------------>OsbHLH66                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------YAB1                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->MYB52(1)         --------->YAB1                         <------NtERF2        <---------YAB1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->ICU4xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->HSFC1(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <---------ANAC46  --------->ARR14(2)     <---------HSFC1(2) <---------WOX13(1)<-------MYC2               <---------RAP2.6(2)                --------->LBD16 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------LBD16 xxxxxxxxxxxxx>smallRNA(si3)<----------ID1 <---------AtMYB61   <---------MYB52(1)<---------LBD16 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ===========================bZIP_DOF   <---------ANAC46     <-----------------AGL1     xxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ANAC58     <---------LBD16   <---------ARR14(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     - xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  ---------->DOF2 <---------HSFB2a(1) -------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->HVH21 --------------->AGL15           x xxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ICU4<---------MYB46(3)--------->ARR14(2)    --------->HSFB2a(1) xxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------ARR14(2)--------->LBD16   < xxxxxxxx>smallRNA(si3)  ---------->DOF2   <-----------RAV1(1)--------->LBD16<------ZmHOX2a(1)     <- xxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xx   atgatggattatgatgatgcacgtggtgaaaggccaagattgcttgtggtggctaacaggcttccggtttctgcaaagaggaccggggaaaattcttggt  5807400                             <---------ZAT18                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  <xxxxxxxxxxxxxxxxsmallRNA(i)                 <---------MYB46(3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     <--------ATHB1                <---------AtMYB61                                      --------->YAB1               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  <---------ATHB12             ------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------YAB1          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     --------->YAB1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    --------->YAB1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <---------ICU4    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <---------YAB1    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       --------->ICU4   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->YAB1 -------->HSFB2a(2)<xxxxxxxxxxxxxxxxsmallRNA(i)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <- xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------HSFB2a(2)   <---------ATHB51                       <--- ---------HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)----------->RAV1(1)        ---------->DOF2 <---- --------LBD16<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------TOE2(3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->HSFB2a(2) --------->YAB1--------->ICU4     --------->YAB1   ctctggaaatgagtcctggtggtttagtcagtggtcttctaggtgagtcatgagacaacaataataataacaatgattttagtaaagactataatgtttt  5807500                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                <---------AtLEC2                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               <------MYB83xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               <------MYB46(1)              ----------->GT1                  <---------MYB46(3)                                   -    <---------YAB1  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->LBD16                     ---------    <---------TOE2(3)                        <--------P<------NtERF2<---------AtLEC2     --------->ZAT18    <---------TOE1(3)                       <---------ANAC46       <-------TEIL          --------->ZAT14 <---------MYB52(1)<-----------GT1     ------>MYB83  <---------ANAC46                    <---------ZAT18 --------ZAT6<---------TOE2(3)         ------>MYB46(1)<---------LBD16               --------->AHL20(2) ------At5g28300 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------- -------GT1  <---------TOE1(3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       ----------->GT1     <-   actgttatggttttgaaggtataacatctcaatttgataccaaatgggttggatggcccggagttgatgtgcatgatgaaattgaaaaaaatgcactcac  5807600                                                                               <<<<<<<<<MYB98                                                                             <---------YAB1                                                                             ----------->GT1                                                                            <---------TOE2(2)                                                                       --------->GLK1(2)                                                                      <---------GLK1(2)                      ------->TEIL                                   <------ZmHOX2a(1)                   --------->ANAC58                                --------->MYB59              <---------------AtSPL3                             <---------MYB52(1) ------>TEIL  <---------------AtSPL8                           <---------MYB46(3) >ANAC58  <---------RAP2.6(3)              <-------MYC3     ------------>AtMYB77  ---------->DOF2 >ANAC58 --------->RAP2.6(2) ------>ZmHOX2a(2)           <---------GLK1(2)  <---------TOE1(2) --------GLK1(2)   --------->ANAC58        ------->MYC3<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <-   tgaatctctagccgaaatggtacgaatttgatcccaacatgtccatgtgtatattgaaagattagcggttaggaatcttatgttaaaaggaatcgtatag  5807700                                             <----------ID1                                             ----------->GT1                                            ----------->GT1               ----------->GT1                                            ------------------------>ANAC81                                          ---------->DOF2                 <----------ID1                                    --------->LBD16              <----------ID1    ------------------                                    ----------->GT1              ----------->GT1  ---------->DOF2                                   <---------HSFC1(1)            ------------------------>ANAC81                                   --------->HSFB2a(2)          ------------------------>ANAC81  ----                                   <---------HSFB2a(2)         ---------->DOF2-----------------------          --------->TOE1(1)    --------->KAN4(2)        ----------->GT1  ------------------------>ANAC81          --------->TOE2(1)  <------ZmHOX2a(2)          ------------------------>ANAC81      --------    <---------AHL20(2)      --------->ARR11(3)         ------------------------>ANAC81      --------- ------TEIL                 <---------ARR11(3)     ---------->DOF2      ---------->DOF2----------->GT1   atgcatataatctcgtacataagagttatagatcattctggaaaaaaaggaaaaaaagaagaaaaaaaagaaaaaaaagaaaaaaaaagaagaaaaaaga  5807800  Previous    Next  AGI:  At1g16980.1    Description:  ATTPS2 (Arabidopsis thaliana trehalose-phosphatase/synthase 2); transferase, transferring glycosyl groups. similar to ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G78580.1); similar to ATTPS3 (Arabidopsis thaliana trehalose-phosphatase/synthase 3), alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Arabidopsis thaliana] (TAIR:AT1G17000.1); similar to ATTPS4 (Arabidopsis thaliana trehalose phosphatase/synthase 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G27550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39484.1); simi Range:  from: 5807304    to: 5811481    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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