Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <-------TEIL                                                -                               <---------At4g35610                      <---------At4g35610        <-                               --------->ZAT2                           --------->At4g35610       <--                               <---------ZAT2                       <----------DOF2 --------->YAB1<--            <-------TEIL       --------->At4g35610    <---------At4g35610          >>>>>>>>>MYB98 --- ---->GLK1(2)<---------ANAC55(2)   ---------->DOF2    --------->At4g35610      ----------->GT1<------   tcagtagtcaccgatacataagtatagaatcacagctcaaagtacatgctcactcgagctaacatcgggtctttagctcagtagtaacataatcaaatgt  5782000     --------->ANAC58     --------->ANAC58              --------->LBD16    --------->DAG2               <---------LBD16   ---------->DOF2             --------->ARR14(2)   ==============================bZIP_DOF                                                          -- -------->LBD16                <---------ARR14(2)                                                  <- --------ANAC46               <---------GLK1(1)                                                   --- -------LBD16                 --------->GLK1(1)    <---------AHL20(2)                           <---- -------At4g35610      --------->TGA1a            <---------AHL20(1)                         -------- ------>At4g35610     <---------TOE1(2)           --------->AHL20(1)                         <------- ---REM1(1)           --------->LBD16             --------->AHL20(2)         --------->ZAT6--------->YAB1   agcggaaaagcaaacctgtattcccaggtctgaaatccggacttgtagagaatataatgaagaggctcccagtaattgaacacttcatcgcagtcatgaa  5782100                                                                                    --------->DREB2C(2)                                                         --------->MYB52(1)      <---------ALFIN1                                                       --------->MYB46(3)      <-----------HVH21                                                       <---------HSFC1(2)     --------->ANAC46                                                       --------->HSFC1(2)    --------->LBD16                                                       <---------HSFB2a(1)  --------->ANAC46                                                   --------->ANAC58        <---------LBD16                                              --------->ANAC46            =========================== ------->ARR11(3)                           --------->MYB52(1)            ------>ZmHOX2a(1)    ------ --------ARR11(3)                       --------------->AGL15          ------>MYB83 --------->ANAC46 ------>YAB1                     ---------->DOF2   --------->ANAC58    ------>MYB46(1)       <------- -----WOX13(1)       --------->MYB52(1) <---------------AGL15        --------->AtMYB61       -------- ->ICU4           --------->ANAC55(2)  <-----------------AGL3        <---------ALFIN1------>NtERF2 <- --YAB1           <---------ANAC55(2)  ----------------->AGL2     --------->AtMYB61 --------->DEAR3(1)   tgatattagaagtcgcgctcatgtaacgaagataacaaagcgctataaacggcaagaaccatcggagaccaccatcctccgcatcaccgccattagatcg  5782200                                                                         <---------bZIP60(2)                                                                         <---------TGA1a                                                                      ----------->HVH21                                                                    --------->At4g35610                                                                    ----------->RAV1(2)                                                                    <---------At4g35610  <-------TEIL                           <---------ANAC58                     --------->ANAC46        <------ZmHOX2a(2)      <-----------GT1      <---------ANAC46                     --------->ANAC58   <---------MYB52(1) =HOX2a_HOX2a              <---------ANAC58                     --------->ANAC58<------NtERF2 >ZmHOX2a(2)           <---------ARR11(3)                    <---------ZAT18  <---------DEAR3(1) --ARR14(2)     <---------HSFB2a(2)                          --------->ZAT18 <------NtERF2 ->ARR14(2)     --------->HSFB2a(2)             <-----------HVH21------>NtERF2--------->DEAR3(1) ----------RAV1(2)     --------->ARR11(3)>>>>>>>>>TBF1--------->CCA1(2)  <---------O2  --------->AGP1   gccaggtttatcggtcttcgagtaagatttcgtagaagacgaagaagaagagtcagatataagtggacgcctctgacgcgtcgtcgttagatccatcgag  5782300              --------->ANAC46              --------->ANAC58              --------->ANAC58                                                              ---------           --------->At4g35610                           --------->ZAT18               --------->ANAC58           --------->ZAT2  <---------ANAC58              <---------ZAT18               --------->ANAC58           <---------ZAT2  ----------->GT1               --------->ZAT14            --------->ANAC46     <-----------ARR10     <---------ANAC58              <---------ZAT14        <---------HSFB2a(2)     --------->GLK1(2)     <---------ANAC46      --------->AHL20(2)             --------->HSFB2a(2)--    <---------GLK1(2)  <---------AtMYB61         <---------AHL20(2)    --------->KAN4(2)    <--------   cttagagaatctcagcacgaaaatggaggtcgtgaaattgcaaatggaagttttattagttcacttcattgttcattctcttctcgacgaagcaatgaag  5782400                <-----------ARR10                <---------ARR11(3)    --------->CCA1(2)   --------->ARR11(3)                                     --------->ICU4              <---------YAB1   <---------ARR11(3)                                    <----------DOF2   <---------AHL20(2) >ICU4----------->GT1                             ---------->DOF2 --------------->AtSPL8 -------->DOF2  --------->ARR11(3)            >>>>>>>>>GATA-1     <---------------AtSPL8       ------ -ATHB12   ---------->DOF2*TSS              ----------->GT1       --------------->AtSPL3     <-------   aaaaagatttgtgaaaagtatctcatcgaattagaggcttattacatagataaaaaggcctttattaagtcgtacatataatgggcttattagtacttta  5782500                          --------->ANAC55(1)                          --------->ANAC58                            --------->HSFC1(1)                          --------->ANAC58                            <---------HSFB2a(2)                          --------->ANAC46                            --------->HSFB2a(2)                          --------->ANAC55(2)                        <---------LBD16                        <---------ALFIN1                         <----------DOF2                 <----------DOF2                           --------->ANAC58      <---------YAB1   <---------REM1(2)                   --------->ANAC46               ---------->DOF2 ---->DOF2      <---------DAG2                             --------->ANAC58          --------->WRKY45 ---DOF2     <-----------GT1                  <------ZmHOX2a(1)  <---------DAG2    <----------DOF2  <   agcccattatgttttttgccttttctacacgttactgatcacacattaggagttttgatataagccacttttctggaatcagacactttgactaaagtcc  5782600                                                                                   <---------ALFIN1                                                                                 <---------ALFIN1                                                                                 <-----------HVH21                                                                                 ----------->RAV1(1)                                                                                 ------>NtERF2                                                                                --------->ANAC46                                                                                --------->LBD16                                                                      <---------ZAT14                              <----------DOF2            <-----------GT1        <---------ETT(1)                      ---------->DOF2               <---------ATHB12  --------->ZAT14                 <---------ALFIN1               --------->ANAC46    --------->ANAC46 ---------ZAT2 ----------->RAV1(1)      --------->AHL20(2)<---------At5g28300   ----------->HVH21   caagctcataactaatccaacacttaaagctacttttatcgaaaaaataccccaaacatttacagtctccactacacaaaccccgacacttgctctctcc  5782700                                                           --------->YAB1                                                          <---------YAB1                                                        <---------ICU4                <---------YAB1                          -------->HAHB4            --------->TOE2(3)                           --------->YAB1          ------>MYB83                                 --------->ICU4          ------>MYB46(1)                            --------->YAB1         --------->MYB52(1)                         <---------YAB1  <---------LBD16 <-----------GT1        --------->AtMYB61             <---------ALFIN1<---------AHL20(2) <------ZmHOX2a(2)   aagcgcaagaccaacgttatacttagtcatgaaatgctcaacacctccaagtctataataatgaaaactcttcggatcacaactcttcaccttcttaggc  5782800                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                -----                                              <---------ALFIN1                                  -----                                         --------->ANAC46                                      <-----                                       ---------->DOF2<---------WOX13(1)                      -------                                      --------->WRKY18(1)                        <---------ALFIN1----                                    ------->GAMYB    <---------ANAC58       --------->ANAC46  -------                                 --------->MYB52(1) --------->ATHB12      --------->ANAC58 --------->At5g28300                          <---------ALFIN1  ----------->RAV1(1)           --------->ANAC58 --------->DOF5.7(2)  --------->ANAC58       --------->ZAT18 --------->ANAC58        --------->GLK1(1)        -----------  --------->ANAC46       <---------ZAT18 --------->ANAC58   ------>ZmHOX2a(1)  <---------ALFIN1------  --------->ANAC58  ---------->DOF2--------->MYB46(3)<---------ANAC58   ---------->DOF2 <---------ORA47(1)   ttacaagccttactccagcccattaagcccactcccaacggacaagccacacattgattgtcctcacaaatcccaaacgctccacacttggacggtaacc  5782900  Previous    Next  AGI:  At1g16900.1    Description:  sugar binding / transferase, transferring glycosyl groups. similar to mannosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G14850.2); similar to mannosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G14850.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72375.1); similar to hypothetical protein OsJ_000815 [Oryza sativa (japonica cultivar-group)] (GB:EAZ10990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39395.1); contains InterPro domain Alg9-like mannosyltransferase (InterPro:IPR005599) Range:  from: 5779014    to: 5782426    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g16905.1    Description:  sugar binding. similar to curculin-like (mannose-binding) lectin family protein [Arabidopsis thaliana] (TAIR:AT1G78860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75015.1); contains InterPro domain Curculin-like (mannose-binding) lectin; (InterPro:IPR001480) Range:  from: 5782448    to: 5783833    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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