Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->YAB1                   <---------ICU4                  <---------HSFB2a(1)                  --------->HSFB2a(1)                  --------->HSFC1(2)                  <---------HSFC1(2)                 <---------KAN4(2)             --------->LBD16            <---------ANAC46        --------->At4g35610                                                      <-------GAMYB        <---------At4g35610                --------->ALFIN1  --------->ANAC58    <-----------HVH21        --------->ZAT2             <-------TEIL   --------->ZAT2                <---------MYB46(3)        <---------ZAT2          --------->At4g35610          --------->ANAC46   <---------DEAR3(2)       <-----------RAV1(1)      <---------At4g35610          --------->ANAC58  <---------RAP2.6(2) --->LBD16 <---------LBD16  <-----------HVH21    --------->ARR11(3)            <---------DEAR3(1)<---   ataaactggctgctgcgggaatcatccctccatcagatgcaagaagtggaagagctcggtttcaaggaagaatgggtagaggcggtcggattgtatttga  5709300                      <---------ALFIN1                      ----------->RAV1(1)                  ------>MYB46(1)                  --------->ANAC58                  ------>MYB83         ------>ZmHOX2a(1)                     <---------REM1(2)     --------->ARR14(2)        <-----------RAV1(1)                                    --------->ATHB12     <---------ARR14(2)      <---------At5g28300      ----------->RAV1(1)         <<<<<<<<<TBF1 ------WOX13(1)   --------->ANAC58     <---------ALFIN1                        <<<<<<<<<TBF1---------   tagatggaatcctctaaaccaagcccacattaactgtggcaacactctctacatagcaccataacatctcaactagttttcttcttcttcattgtaaaga  5709400                          <---------MYB46(3)                         <---------ANAC46                         --------->ALFIN1               ------>ZmHOX2a(1) <---------GLK1(2)                                          <--------         --------->MYB52(2)    <---------YAB1                                             --------->LBD16         <---------MYB46(3)    --------->ICU4                                      <<<<<<<<<MYB2      <-----------HVH21<---------MYB46(3)             ------->TEIL      <---------ZAT14  --------->LBD16     --------->ANAC46 <---------AtMYB61              <---------CCA1(2)  --------->ZAT14 <---------LBD16    --------->LBD16   --------->ALFIN1   --------->AtMYB61  ------>ZmHOX2a(1) <----------DOF2 ------- ->DOF2<---------MYB52(1)<---------AtMYB61       <----------DOF2     <---------ANAC46  <---------LBD16   gttatccccgttagttcctccccagtggtggtgaagattgtcaccaaaacactttgtatctcctctaaattttgtgtagtctttggttttcccggtttat  5709500                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                                         --------->O2                                                                                         --------->ANAC58                                                                                         --------->bZIP60(2)                                                            =======================================bZIP_DOF                                                            --------------->AGL15        --------->TGA1a                                    --------->MYB52(2)      <----------DOF2              <---------O2                                  <---------MYB52(1)        <---------------AGL15      <---------ALFIN1                                 <---------MYB52(1)      <-----------GT1              <---------WRKY12                              <-------TEIL         ----------->GT1                    <---------WRKY38(1)                          --------->MYB59          --------->ANAC55(2)                <---------WRKY45  --------->WOX13(1)   <----------DOF2   <---------YAB1  <---------AHL20(2)        <------MYB83 --DOF2            <---------ZAT18<--------P       <---------ANAC55(2)             <------MYB46(1)  - -->ATHB12    <----------DOF2 <---------LBD16 --------->YAB1<---------DAG2        --------->MYB59  --   tgatcaatctcggctactttgtgaactttaggtccggttagtgaccattgatcaggtattaacttttttcagcaatggtctagtttggtccacgtcttga  5709600                                                                               <---------At4g35610                                                                               --------->ZAT2                                                                         --------->ARR14(2)         ------>ZmHOX2a(1)                                               <---------ARR14(2)         --------->LBD16                                               --------->LBD16       ------>ZmHOX2a(2)                                              --------->LBD16      <------ZmHOX2a(2)                                         <------------CBF     <---------ARR14(2)                               <-----------GT1<---------LBD16     --------->ARR14(2)                            --------->YAB1<---------WOX13(1)     <---------ARR11(3)                          ------>MYB83   <---------ANAC58     --------->ARR11(3)                        <---------MYB59 --------->ATHB12<---------ZAT2 ---------->RAV1(2)                     <-----------HVH21     <---------YAB1   --------->At4g35610 ------->GLK1(2)                 <------------CBF------>MYB46(1)<---------ANAC58   gaacctggatcctgaaatgtgtgaaacttggaaggaattgactgtcataccaaatataaccggtttgattgcccggttatgagctgagtaagtagttaac  5709700                                                                          <---------ANAC46                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                       <---------GLK1(2)                                                               --------->ANAC46                                                               --------->ANAC58                                                 ------>NtERF2 --------->ANAC58                                                --------->ETT(2)       <---------ARR14(2)           -                                                <---------ETT(2)       --------->ARR14(2)           <                                                --------->MYB46(3)    ===============================           ----------->GT1       ------>ZmHOX2a(2)   --------->At5g28300 <-------TEIL               -     ------------>CBF      <---------At4g35610  ----------->HVH21     <------ZmHOX2a(1)             <   ----------->GT1*TSS     --------->At4g35610  --------->DEAR3(1)---------->DOF2              <-----   cagaagggtcaatttgtaaattaagagacatctgatcgaattttgttccgacgaccgtgaatcaccagcaaaggattcgtgtcaatgttcttgtgagatc  5709800             <---------ANAC58<---------DAG2             <---------ANAC46--------------->AGL15      <---------LBD16        <---------------AGL15 <----------DOF2            <---------ANAC58 -------->HSFC1(2)          <---------ANAC58                                       --------->KAN4(2) ---------HSFB2a(1)   <---------HSFC1(2)             <-------TEIL              <------MYB46(1) =HOX2a_HOX2a<---------ANAC58<----------DOF2     <---------TOE1(3)             <------MYB83 -------->HSFB2a(1)   --------->HSFC1(2)         <---------TOE2(3)           <---------MYB52(1) ---------HSFC1(2) <---------At4g35610     <---------ANAC46                 <-------GAMYB -ZmHOX2a(2)<-------TEIL<----------DOF2<---------ARR14(2)              <----------DOF2   gaactttctctgggttcgtgcagaagctttgcttttttgagtatcgcgtttaaggttcggatggaattttaggcttttcgttggtcattctcttgttcaa  5709900                   =======================================bZIP_DOF                <---------TOE2(3)                <---------TOE1(3)    <-----------GT1           --------->ATHB12        --------->GLK1(1)         <---------WOX13(1)       --------->ARR14(2)        <---------ANAC58          <---------GLK1(2)        <---------AtLEC2 --------->At4g35610        <---------ANAC58 <---------At4g35610    --------->TGA1a   <----------DOF2 <----------DOF2<---------ARR14(2)    <-------TEIL   tgcttcttttgcttgattaagcttttcagctaatcggattttcttctctcacatcaggcacatcgaagaagagagaccctaatttgatattttgagttct  5710000                                  --------->ZAT18                             <---------ZAT14                          <---------MYB46(3)                                                       --                <---------STY1(2) <---------ZAT14                   <---------TOE1(2)              <-                --------->STY1(2) <---------ZAT18                   <---------TOE2(2)              --                --------->ZAT2    --------->ZAT14     <---------ANAC55(2)                <---------ANAC46     <---------ANAC58  <---------ZAT2      --------->ZAT2    --------->GLK1(2)   <---------AHL20(2)<-     <---------ANAC58 <---------TOE1(2)    <---------ZAT2   <---------GLK1(2)   --------->AHL20(2) --   atcgatggcttcgctactagctcgcaggtcgttcagtgctctccgagctcgacatctcgtaagaatctcgtaggctcttccattttatatcgcttatatt  5710100                                                                         ------->PIF5                                                                         <-------PIF4                                                                         ------->MYC4                                                               <-----------ARR10                                                              <------NtERF2                                                             <---------ATERF1(1)                                                             ------>NtERF2                                                             <---------DEAR3(2)                                                            --------->RAP2.6(2)                                                            --------->ATERF1(2)                                                            <---------DEAR3(1)                                                            <---------ATERF1(2)     <---------At4g35610                                                           --------->RAP2.6(3)     --------->ALFIN1                                                           --------->SPL7<-------PIF5                                                          --------->ZAT2 ------->MYC2     >>>>>>>>>CBP60g                                      ------>NtERF2  ------->PIF4     >>>>>>>>>SARD1                                       <---------ATERF1(1)     ------------------- ------->HSFC1(1)                                        <---------SPL7  <-------MYC3 --------HSFC1(1)--------->At4g35610                    --------->DEAR3(1)      --------->ALFIN1 ------->HSFB2a(2)                        <------MYB83 <---------LBD16   ------->MYC3 --------HSFB2a(2)                        <------MYB46(1)------>NtERF2   <-------MYC2 ---->ZmHOX2a(1) <---------At4g35610    <--------P     --------->ATERF1(1)      <-----------RAV1(1)   cctagaaatttggaattgctgctaagttttttgaaatcactagttggtattgtctgccccggccggctctaggcatgtgcaagtggtgctgctatacatg  5710200  Previous    Next  AGI:  At1g16690.1    Description:  transcription factor-related. similar to transcription factor-related [Arabidopsis thaliana] (TAIR:AT1G79020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67072.1) Range:  from: 5705962    to: 5709526    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g16700.1    Description:  ATMLO14 (ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 14); NADH dehydrogenase (ubiquinone). similar to NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) [Arabidopsis thaliana] (TAIR:AT1G79010.1); similar to NADH:ubiquinone oxidoreductase-like [Solanum tuberosum] (GB:ABA81853.1); contains InterPro domain NADH-quinone oxidoreductase, chain I; (InterPro:IPR010226); contains InterPro domain 4Fe-4S ferredoxin, iron-sulphur binding; (InterPro:IPR001450); contains InterPro domain Alpha-helical ferredoxin; (InterPro:IPR009051) Range:  from: 5709718    to: 5711895    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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