Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <<<<<<<<<<                                                                                          -----------                                                                                          <----------                                                                                         ------------                                                                                         <-----------                                                                                         ------------                                                                                         ------------                                                                                         <-----------          --------->LBD16<---------WRKY18(1)                                             <-----------         --------->LBD16 >>>>>>>>>>WRKY26                      ----------->RAV1(1)       ------------        <---------HSFB2a(2)   ---------->DOF2                 --------->MYB46(3)      <----------DOF2 ------>ANAC58           >>>>>>>>>>WRKY38                 <------ZmHOX2a(2)    <---------ANAC58 ------>ANAC46           >>>>>>>>>>WRKY43                --------->ARR11(3)    <---------ANAC58 ------>ANAC58          --------->WRKY38(1)              <---------ARR11(3)    <---------ANAC46   aagaaacaatcccgaagaacatcgacttgaccaaaagaagacatcaacaaggatggcaagatcaacaacaatggctgaatggcttgttctttccaacaat  5705600      <---------------------WRI1 <<<<<<<LFY ---->AGL15 -----AGL15 ----->AGL2                                            <---------ICU4 ------AGL2                                           --------->ICU4           --------->At4g35610 ----->AGL1                                     <---------TOE2(3)              <---------ZAT2 ----->AGL3                                 <----------DOF2              --------->TOE1(2)        <-- ------AGL1                              --------->GLK1(2)            <------ZmHOX2a(1)         ----- ------AG    --------->CCA1(2)    ----------->GT1----------->GT1  ---------->DOF2              <----- ----->AG ----------->ARR10    ---------->DOF2  <---------TOE1(3) --------->MYB52(1) <-----------GT1   ggaaaatgggcgaagataagaacgaagagcataaaaaggaaacaatctttaaggtgataatgaagaagtaaaggacatgggagcttgaaaccatatgttg  5705700                                                <---------ZAT14                                                --------->ZAT14                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         --------->ARR11(3)                                         <---------ARR14(2)                                     <---------LBD16                                     --------->LBD16                                    <---------ANAC46                                    <---------ANAC58               ------>ZmHOX2a(2)    <---------ANAC58               =====================================HOX2a_HOX2a              <------ZmHOX2a(2)  <---------ARR14(2) -------WOX13(1)       --------------->AGL15 ------>ZmHOX2a(1)   <---------TOE1(3)  --------->TOE2(3) ---->ATHB12 --------->ARR14(2)  --------->GLK1(2)<---------ZAT14<---------YAB1  --------->GLK1(1) ----YAB1    <---------ARR14(2)  --------->ARR14(2)              <---------TOE2(3)  --------->TOE1(3)   attgatcacttgttggatcccttctctgtaaatagaatccgtggatcctgtgtactgtgatgttgttatggtttttctctgagaaaccctaaactatgta  5705800                                                                   --------->LBD16                                                                  <---------HSFB2a(2)                                                       --------->ANAC58                            --          ---------->DOF2                   <---------TOE1(3)     --------->HSFB2a(2)          ------      <----------ID1                        <---------TOE2(3)    <---------LBD16        <-------TEIL    --------->ANAC58                  <---------TOE2(3)--------->ANAC46                <------ZmHOX2a(2)    --------->ANAC58                ---------->DOF2    ----------->GT1                --------->AGP1  ---------->DOF2              --------->GLK1(1)       --------->ANAC58             --------->MYB59<-   atgtgaaagctacaaagaagaccagttaaccagaaatctaaaggttaagtttattacaagtaaaatttctggagaaacattttagttagatccatgatcc  5705900                                                                                       <-----------GT1                                                                                      <-----------GT1            <---------ANAC58                                                       --------->AHL20(1)          <---------YAB1                      <------------CBF                     <---------AHL20(1)          --------->ICU4                <-----------RAV1(1)                     ------>MYB46(1)   ------->PIF5                         <---------MYB46(3)                      ------>MYB83   <-------PIF5                         <---------REM1(1)                  <-----------GT1 ------->ZAT2                        <-----------RAV1(1)        --------->MYB46(3) --------->ARR11(3) >ZmHOX2a(2)<---------ANAC58   <---------TOE1(2)              *TSS---------->DOF2  <---------ARR11(3) --------ZAT2                  <---------TOE2(2)           --------->TOE2(3)  <---------MYB59 ------>ZmHOX2a(1)   aagctcgtggtaatgcttgaaatttgatgttcttatgttttgttgttgcattgttctcatacattaaccaaagcttattaccaaatattttccctcctcg  5706000                    <---------MYB52(1)                   <-------GAMYB                  <---------MYB46(3)             ------>ZmHOX2a(1)          ---------->ID1                                                          <-----------GT1      <---------MYB52(1)           <---------ZAT6  <---------MYB52(1)          <---------KAN4(2)  <---------At4g35610          <---------YAB1   <-------TEIL                 <------ZmHOX2a(1)   attcaactgtttgtcctcgtctgttaatcgagtattagtgaaactcgacatccattacttcaattgtcgagactagagaggaattttcaattcgttttcg  5706100                                                                                                  ---                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                     <---------MYB52(1)                                                                                     <---------SPL7                                                                                    <---------DEAR3(2)                                                                                    <---------RAP2.6(3)                                    --------->ARR14(2)                            <---------LBD16----                     <---------ANAC58         --------->At4g35610           --------->ATHB12  <------          <---------GLK1(2)         <---------ARR14(2)                     <---------YAB1   <-------TEIL      ---------->DOF2<---------ANAC58      <--------P                 <---------GLK1(2)--------->SPL7   --------->YAB1    <---------ANAC46 <---------LBD16---------->DOF2--------->LBD16<---------------AtSPL3   gacatttataaagcttctctcttccttgaatttcaacgtttctgggtaagctcgaaaaagagaacagaccccgatttttgattagccggtacgattcgtc  5706200                                                                                                -----                                                                                             <-------  <------ZmHOX2a(1)                                                                --------------->AGL15 ------>LBD16                                                                     <-----------------AGL1 ------HSFB2a(2)                                                                  <-----------------AG ---->SPL7                                                                        =================== -----LBD16                                         --------->LBD16     <-----------GT1   <---------TOE1(3) ----->HSFB2a(2)              <-----------GT1      --------->LBD16   ----------->GT1      <---------TOE2(3) ---SPL7         --------------------->WRI1 <----------DOF2<---------ZAT14      <-----------GT1 <----   cggaggaatagaaaactcgccttgtaagtatatcacatctcattcgctttccccccgatattacactgaaattgttacacatttaccagtttagggttct  5706300                                 ----------------->AGL2                                 ====================================================================                       <---------MYB52(1)  <---------GLK1(2)             --------->LBD16     ----------------->AGL3            --------->ANAC46  <----------DOF2             ------>ZmHOX2a(1)                      <---       --------->ARR14(2)    <---------ANAC58     <----------DOF2                                ----       <---------ARR14(2)    <---------ANAC58  <-----------GT1                                  -----       ------->TEIL   <-------GAMYB        --------->ARR11(3)                               <-------- ---->HSFB2a(2)      <-----------RAV1(1)   <---------ARR11(3)                               <-------- --ARR14(2)<---------LBD16 <-----------GT1 <---------ARR14(2)                         --------->ARR11(3) ==================================================MADS_MADS            ---------->DOF2  <----------DOF2 -----HSFB2a(2)  <---------GLK1(1)         --------->ARR14(2)       <------ZmHOX2a(1) <---------ARR11(3)   gggattttgaatctgcgcgatttctgttgtttctttccatttgcagattttactttcttcctgtctcataggagcaaagcgttgatgaggtctttcgtac  5706400                                                                                              ------- ============MADS_MADS                          --------->ICU4                        --------->ANAC46 ------------AGL15                       ----------->GT1                   <---------ALFIN1   <------ ----------->AGL15                     <---------ARR11(3)                 --------->ZAT14     <------ ------------>AGL2                     --------->ARR11(3)                 <---------ZAT14     ------- -ANAC58      <---------ARR11(3)   <------ZmHOX2a(1)         <----------DOF2         <-------TEIL -ANAC58      --------->ARR11(3)<------ZmHOX2a(1)    --------->ZAT18    <-----------HVH21     -------   tcaaaatagctatatagatattgtttagtagagaggaggaagatagtgaaatgagtaggctatcttttcgaccccgtccactggacatacacaagaagct  5706500  Previous    Next  AGI:  At1g16680.1    Description:  DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative. similar to DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative [Arabidopsis thaliana] (TAIR:AT1G79030.1); similar to S-locus protein 5 [Brassica rapa] (GB:BAA85454.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609) Range:  from: 5702806    to: 5705831    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g16690.1    Description:  transcription factor-related. similar to transcription factor-related [Arabidopsis thaliana] (TAIR:AT1G79020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67072.1) Range:  from: 5705962    to: 5709526    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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