Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->ZAT14                                                                     <---------At5g28300                                                                   <---------YAB1                                                                 <---------ICU4                                                                <---------YAB1                   <--------ATHB1                             --------->YAB1                   --------->YAB1                             <--------HAHB4                   <---------ICU4                             <---------ICU4                  --------->ICU4                             <---------YAB1                  <---------ATHB12                           --------->ICU4           <------ZmHOX2a(2)                               --------->YAB1          --------->ARR11(3)                               <---------ICU4          <---------ARR11(3)                     --------->YAB1 --------->ICU4   ------>ZmHOX2a(1)        ----------->ARR10           <---------KAN4(1)   --------->YAB1 --------->DEAR3(1)   --------- -------AtLEC2<---------YAB1        --------->KAN4(1)<----------DOF2<-----------GT1<----------DOF2   gcatgatggtaagatcatcaatgatggtcagagttggattgttctatggaatcatctttcatcatcattatcaccgctctctcctctttattaagagtaa  5686200                                                                                  --------->HSFB2a(2)                                                                                  <---------HSFB2a(2)                                                                                  <---------HSFC1(1)                         ----------->RAV1(1)                                 <---------HSFC1(2)     -                        --------->ANAC46                            --------->YAB1--------->HSFC1(1)-      <----------DOF2 --------->ANAC46                     --------->LBD16   --------->HSFC1(2)     < -->GT1 --------->AHL20(2)                             <-----------GT1      ------->TEIL            <   aacatcgactttaaatctaagaaaacacaacacaatagacaaaataacttctaaatttttccctagaaaatagtaatgaagcttcgagaaaacactgaat  5686300                                              --------->CCA1(2)                                    --------->REM1(1)                                             <--                                   --------->SPL7   <---------ARR11(3)                        ------>ZmHOX2a(2)                                <---------ANAC46    --------->ARR11(3)                        =======    --------->At4g35610        <---------------AtSPL8                                       <--------    <---------At4g35610        <---------------AtSPL3    <---------AHL20(2)                 --------- -------->HSFB2a(2)            --------------->AtSPL8    --------->AHL20(2)                 <-------- -------->HSFC1(1)             --------------->AtSPL3  <----------DOF2                      --------- ---------HSFB2a(2)    --------->GLK1(1)     <---------ARR11(3)                            <---------CCA1(2) ---------HSFC1(1)     <---------GLK1(1)     --------->ARR11(1)  <---------ZAT14  <----------DOF2 ---   ttctagagcagacgctgtttcgaagaattctgagtcgtacatcaaaagatttgaggtctttaaatagtggagagaactctagggttttaagttggatctt  5686400                                                                                               <-----         <------ZmHOX2a(1)--------->ATHB12                                                     <-----   --------->ETT(2)      <---------YAB1                                                        <-----   <---------ETT(2)      <---------MYB52(1)                                         <---------DAG2 -------HSFB2a(2)   --------->At4g35610                                             <----------DOF2 ===============HOX2a_HOX2a                                               <------MYB83         <----- -ARR11(3)          --------->ZAT2                             --------->YAB1    ---------->ID1------ >ARR14(2)          <---------ZAT2                          ----------->GT1   --------------->AtSPL8 -ARR14(2)<---------ARR14(2)                  <---------AHL20(2)  --------->YAB1 <-----------GT1 >ARR11(3)--------->ARR14(2)      <----------DOF2    ---------->ID1      --------->MYB59       <----- ------>HSFB2a(2)   <---------At4g35610   ----------->GT1   --------->YAB1<------MYB46(1) <---------AtLEC2   ctaggtcgataggatttgtctcagctcgttattgggctattgggctgtataatttggcccaatagtaataagagtttggttttgtactttttgtatggtg  5686500                          <------MYB83                          ----------->GT1     --------->HSFB2a(2)  <------MYB46(1)    --------->REM1(2)   <---------WOX13(1) ----bZIP60(2)         <------------CBF ------RAV1(1)        <---------MYB46(3)                            <---------ICU4 ----ANAC46           --------->ATHB12<------NtERF2                ------>ZmHOX2a(1) ----ANAC58          --------->ICU4 --------->ALFIN1       ------------>CBF                     *TSS --->ALFIN1    --------->DAG2    --------->DAG2          --------->bZIP60(1)        <---------WOX13(1) ----ANAC58   ---------->DOF2  ---------->DOF2           <---------bZIP60(1) <----------DOF2    <----   tggccttgtagaatagaaaagcagtgattggtcaaaaggtggcaagttgtttgactatgacatcaattcctcatttcatctttttgatttacagagaaaa  5686600       <---------ZAT14    --------->ARR11(3)                                  <----------DOF2       --------->ZAT14    <---------ARR11(3)                                 <-----------------------       <---------ZAT18   <---------At4g35610                          ----------------------->TaNAC69(2)       --------->ZAT18---------->DOF2               --------->DAG2 <---------TOE1(3) --------CBF   <---------PCF5                      ---------->DOF2 <---------TOE2(3)     <----------DOF2   ttgaaatagtccactcgggaccattgaagctctctctctgtttctgcattacaaaaagtgtttgttttcaaggtttctctctttcacttctctttgtttt  5686700                              <-------TEIL                            <-----------------AGL2                            <-----------------AGL3                           --------->At4g35610                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                     <---------AtLEC2                                   <-------TEIL                   <---------YAB1   <------MYB83                     ----------->GT1        ---------            <---------HSFB2a(2)     <------MYB46(1)                 <---------AtMYB61       <--------            --------->HSFB2a(2)--------->REM1(1)            --------->ZAT6   --------->AHL20(2) -ANAC81   <---------LBD16 <---------At4g35610           ----------->HVH21   <---------AHL20(2)    --   cttcatttcaatttctggattttgcttgtagctacatttggtctcactctattccatggctgacactggtgaggttcaatttatgaagcctttcatctca  5686800             <---------ICU4             --------->ATHB12                                                               <--------      --------->At4g35610                                                               --------->ZAT14      <---------At4g35610                        <---------AHL20(2)                     <---------ZAT14 >At4g35610  -------->ATHB1                     <---------AHL20(2)                     <---------ZAT6 -At4g35610 <---------ATHB12     <---------CCA1(2)   <---------AHL20(2)              <---------ANAC46 -------->DOF2         <---------AtLEC2     <----------DOF2                        <---------ZAT14   gaaaagtcatctaaatcattggtgagcatggctctctatctttcttcttttttattttcttatttcaacaagttcaaaatatgtgtttagtgttctgatt  5686900                                                                           <---------MYB52(1)                         <----------DOF2                             <---------ANAC58                        <---------ANAC58                             <---------ANAC58                --------->At5g28300                               <---------WOX13(1)           ------               ----------->GT1                                 <---------AHL20(2)             -------              <---------TOE1(3)                              ------>ZmHOX2a(1)     --------->AHL20(2)              <---------TOE2(3)                              <----------DOF2    <----------DOF2------             <---------ANAC46         <---------AtLEC2 --------->MYB59<----------DOF2        -------- -YAB1 <---------TOE1(3)<---------ANAC58    <---------At4g35610--------->AHL20(2) --------->AHL20(2)   tggagacttatggtttagggtaaattgctttagttcattttcatggagctaataacttaggtcctttaattgcttttgttagctttaaattagcaaaaag  5687000                      --------------->AGL15                      <---------------AGL15                                    --------->ARR14(2)                     <-----------------AGL2                                 <---------ICU4       ----      <---------At4g35610                                                  <---------ATHB12    ------      --------->At4g35610                              <---------YAB1     ------>MYB83        -------   ---------->DOF2   <-----------------AGL3     <------MYB46(1)           ------>MYB46(1)    -------- --->ANAC58          ----------------->AGL2     <------MYB83            <---------MYB59 --------->At4g35610 -->DAG2             ----------------->AGL3    <---------AtMYB61 <---------ANAC58    --------->LBD16 --->ANAC58    ------->TEIL                 --------->ALFIN1     <---------ANAC46  <---------LBD16 -->DOF2      <---------GLK1(2)             <-----------RAV1(1)  <---------ANAC58 <-----------RAV1(1)   caaatgaaagcttactgaatcttgctagatttagaatgaagtttatgtgttggtgttgttataggctgcttgaaccaaacatttctgcggggctgaaaag  5687100  Previous    Next  AGI:  At1g16640.1    Description:  transcriptional factor B3 family protein. Identical to Uncharacterized protein At1g16640 [Arabidopsis Thaliana] (GB:Q9FX77); similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06220.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82365.1); similar to Os01g0723700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044109.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 5686596    to: 5687708    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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