Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ANAC58   ----------->GT1        <---------ANAC46      <---------AHL20(2)                     --------->ANAC58  <---------MYB46(3)<-------TEIL                --------->AHL20(2)          <---------ANAC58        - ------->ATHB12    <----------DOF2--------->GLK1(2)                         <---------ANAC46        - ------WOX13(1)  --------->At4g35610          ------->TEIL                  <---------ANAC58        <   ttgatgggtgatttagaacagcttcatggggtatagaacctgtacatgaattttttaaaaacacttcagcaatgcattgtgtgattcacaagaaaattga  5673200                   --------->ANAC58                   --------->ANAC46     <---------ATHB12                                --------->ARR14(2)        ------>ZmHOX2a(1)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                        --------->ARR11(3)      <---------ICU4  ----------->RAV1(1)       <---------ZAT2             <---------ATHB12 -------->ANAC58   --------->ANAC58     --------->ICU4               <-----------ARR10  <---------ARR14(2) -------->ANAC58  ------->MYC3--------->ZAT18<---------ANAC58       <------ZmHOX2a(1)  <------ZmHOX2a(1) ---------TOE2(3) <-------MYC3<---------ZAT18<---------ANAC58 <---------YAB1<---------ICU4   tcaaggaatccttacctccatatgcaacaatgtccacttgaaatgatgcctgcaggtttaagtcattagaggaactaatcaattcaagaggaacttgatc  5673300                                                                                       <---------ZAT14                                                                                       --------->ZAT14                                                                         ------>ZmHOX2a(2)                                                                         ============================                                                                        <------ZmHOX2a(2)                                                                        =============================                                                                        <---------GLK1(1)                                                                        --------->GLK1(1)                                                                       --------->ARR14(2)                                                                       --------->ARR14(3)                                                          ======================HOX2a_HOX2a                      --------->MYB52(1)              <---------TOE1(1)<---------AGP1--------->ANAC46                     ----------->HVH21  ----------->GT1--------->LBD16 --------->ARR11(3)                   ----------->RAV1(2)  <---------ANAC58  =====================HOX2a_HOX2a              --------->ANAC58          <---------ANAC58  <------ZmHOX2a(1)        --------->ZAT6              --------->ANAC58    ---------->DOF2     <---------TOE2(1)<---------ARR11(3)   ---------           --------->ZAT18--------->ANAC58  <---------ARR11(3)         <---------ARR14(2)   ---------  ----------------->AGL1  --------->ANAC58  --------->ARR11(3)         <---------ARR14(3)   ---------   aaatgcaaaaatgggcacaaaacctgacgagcaagagaaagagcgtgatattgcatccgaggacttcgaccaagatctccaagtaccactacacaagccc  5673400   <----------DOF2 ------>ZmHOX2a(1) =======HOX2a_HOX2a                                                        <---------YAB1 =======HOX2a_HOX2a             ---------->DOF2                       ----------->GT1           ----- >ANAC58                   <---------At4g35610                     <---------STY1(2)            <---- >ANAC46                   --------->At4g35610                     --------->STY1(2)         -------- >ANAC58           ------>ZmHOX2a(1)    --------->YAB1        --------->GLK1(2)              --------   ttcctcttttccccatcgttcctatgtcgagctcaaaagttatcagactctactaatccatgagaagctagctagttataaatccaagagcaaacacgaa  5673500                                                        <------ZmHOX2a(2)                                                ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)        --------->DEAR3(1)                                               --------->GLK1(1)        <---------ANAC46                                              --------->AGP1           <---------LBD16                                              <---------ARR14(2)       <------NtERF2                                              <---------AGP1           --------->ATERF1(1)        <------ZmHOX2a(1)                     --------->ARR14(2)      <---------RAP2.3(1)        ================HOX2a_HOX2a           <---------ARR11(3)     --------->ANAC46     <-----------RAV1(2)                      <-----------ARR10  --------->CCA1(2)     <---------LBD16                          <---------ARR11(1) <---------GLK1(1)   ------>ZmHOX2a(2)                         <---------ARR14(1) --------->ARR14(2)  =============HOX2a_HOX2a                  --------->LBD16     <---------ARR14(2)              -----  <------ZmHOX2a(2)                       <---------LBD16------>ZmHOX2a(2)                      <---- <---------ARR11(3)           ----------->GT1<---------CCA1(2)<---------ETT(2)                <------ --------->ARR11(3)      ---------->DOF2 --------->MYB52(1) --------->LBD16                   ------- ---->ARR14(2)        --------->YAB1    <-----------GT1<---------ARR14(2)                     <------ -----ARR14(2)   <------ZmHOX2a(2)  <-----------ARR10  --------->ARR14(2)                    <------- ->ANAC58       <---------ARR11(3)  --------->ARR11(3) --------->ARR11(3)------>NtERF2 <---------At4g35610 ->ANAC58       --------->ARR11(3)  <---------ARR11(3) <---------ARR11(3)--------->LBD16     *TSS  <-   tacgatctcaggaaacaagatcaaacataaagatgtaaaatcttaccggatctactagatcccgtcgatatgcgccgggcaaaattttccgatgaggcgg  5673600                         --------->ANAC55(1)                                        --------------->AGL15                         --------->ANAC46                                           <---------------AGL15                         --------->ANAC55(2)                                        =================       --------->CCA1(2) <---------ANAC55(2)                                       --------->ZAT6 ---->ATERF1(1)          --------->ANAC58                                        <-----------GT1 --NtERF2         --------->YAB1                                          <---------ARR11(3) ---ANAC46     --------->YAB1                                             --------->ARR11(3) -->ALFIN1  ----------------------->TaNAC69(2)                            <---------ARR11(1) ---DEAR3(1)--------->TOE2(3)<------------CBF                             --------->ARR14(2)        - --LBD16<-------TEIL     --------->ANAC58          --------->MYB59        <---------ARR14(2)        < -----ZmHOX2a(1)<---------TOE2(3) <---------PCF2 <---------MYB52(1)      <---------CCA1(2) ----------   aggagagagatacacattaatgaaaacacgtaattgggcccgagggaattagttaggcccatgagttacaaacccatatcttataactctatgaagtaac  5673700                                              ------->MYC3                                              ------->MYC2                                              <-------MYC2                                             <---------ANAC55(2)                                             --------->ANAC55(2)                                             <---------ANAC55(1)                                             =============================================bZIP_DOF                                             <---------ANAC58                                             <---------TGA1a<---------ANAC46                                             <---------O2   <---------ANAC55(2)                                             --------->TGA1a<---------ANAC58                                             --------->O2   --------->ANAC55(2)                                             <---------ANAC58                                         <-----------HVH21  <---------ANAC58                                         <-----------------PIF3(1)          --------->RAP2.3(1)                                    <---------TOE2(3)    <-------MYC3       <------NtERF2                                   ---------->DOF2       ------->MYC3      ------>NtERF2   --------->ANAC58                                   ====================bZIP_DOF            --------->LBD16 --------->ANAC58    --------->AtMYB61            <---------MYB52(2) <-----------HVH21     --------->ATERF1(2) ------>NtERF2                  ----------------------->TaNAC69(2)        <---------DEAR3(1) ====================================MADS_MADS<-------MYC3 <-------TEIL   <---------ATERF1(2) -------->LBD16             ----------->GT1  <---------bZIP60(2)         <---------LBD16 --------->MYB52(1) ---------ETT(1)     --------------->AGL15   <---------ANAC46    --------->ICU4         *TSS ->GT1               <---------------AGL15 <-------------DYT1    <---------YAB1---------->DOF2      <   tcccgaccaaaaaaaaaaaaaaactctatgaagtaactaaagtagtcacgtgtctgtcacatgcgtgattattttgccggcgaaagacgaagaacggaag  5673800                             <---------ANAC46                             <---------ANAC58                          <---------ARR14(2)                          --------->ARR14(2)                                                        <             --------->ANAC46<---------ANAC58                                                      <-            <---------LBD16 <-------TEIL                                                          <--            <---------At5g28300     <----------DOF2    <---------LBD16                           ----         <-----------HVH21<---------GLK1(2)            <---------HSFB2a(2)                --------->YAB1        <----------DOF2  <------ZmHOX2a(1)          --------->ARR11(3)--------->ANAC58   <---------YAB1    <---------ZAT14     <---------YAB1           <------ZmHOX2a(1)    --------->ANAC58 <------ZmHOX2a(1) ------ZmHOX2a(1)      --------->MYB59<---------AHL20(2)<---------ANAC46    <---------ATHB12<--------   aaggacttcactttcacggcgaagttaggattcgtgttctttaatcgtataggaggtctcggagattgtgagacgctaatgagtcggaaggatgataatc  5673900            ------>ZmHOX2a(1)        --------->ARR11(3)    <--------P<---------GLK1(2)  ----------->GT1  <---------ANAC55(2) --------->MYB59                        --------->YAB1 -----------RAV1(2)                    <---------YAB1                                         <------ZmHOX2a(1) --------MYB52(1)                    <---------ICU4                                 <---------ANAC58 ---------HVH21                      --------->YAB1                                 <---------ANAC58 ----->WOX13(1)         <---------AHL20(2)         <---------MYB52(1)          --------->ICU4-------- -YAB1----------->ARR10 --------->AHL20(2)    --------->TOE2(3)           ----------->GT1  <---------   agtcaggtaagttcctgattctaaattttaatgtcataaacatgataacatcagttagtagtttggcttcgaaattttgtaattttgggtgattcaggag  5674000                                                     --------->TOE1(3)                                           <---------ICU4                        <---------HSFB2a(2)--------->ATHB12                        <---------TOE2(3)  -------->ATHB1                        --------->HSFB2a(2)--------->YAB1      <---------SPL7<----------DOF2        <--------ATHB1         <-----------GT1  <------MYB83  <---------ZAT18           --------->ICU4         <-----------GT1  <------MYB46(1)   <---------DAG2        <---------ATHB12<---------TOE2(3)      ---------->DOF2 ->LBD16        --------->ZAT18           <---------YAB1---------->DOF2          <---------ZAT14 --RAV1(2)  <-----------RAV1(1)      --------->YAB1  --------->TOE2(3) ----------->RAV1(2)         <-   aagttggtcgtactctggtggactttatggaagtagccatcacaatgattgtatacctcaaaggtttttacccatctggtgagtaaagagcgatttgtga  5674100  Previous    Next  AGI:  At1g16570.1    Description:  glycosyl transferase family 1 protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO61484.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 5670570    to: 5673593    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g16590.1    Description:  REV7 (Reversionless 7); DNA binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO23810.1); contains InterPro domain DNA-binding HORMA; (InterPro:IPR003511) Range:  from: 5673788    to: 5675124    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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