Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <------MYB83                                                                                  <------MYB46(1)                                                                                  ----------->GT1         --------->ARR14(2)                                                       <---------MYB46(3)         <---------ARR14(2)                                                      <---------AtMYB61 -------ANAC58                                                                  <---------MYB52(1) ------>TGA1a                                                                 <---------MYB46(3) -------O2                                                                   ------>ZmHOX2a(2) ------>bZIP60(1)                                                           <------ZmHOX2a(2) ------>O2--------->CCA1(2)                                                <---------ARR14(2) -------TGA1a                                                        ------>MYB46(1) -------bZIP60(1)                                                    ------>MYB83--------->ALFIN1 -------ANAC46                                                      --------->MYB52(1) -------bZIP60(2)                                                  --------->TOE1(2) -------ANAC58                    --------->MYB52(1)  ------>ZmHOX2a(2)    <---------ARR11(3) -------ANAC55(2)                 <---------ARR14(2) <------ZmHOX2a(2)     --------->ARR11(3) ------>ANAC55(2)                 --------->ARR14(2)<---------ARR14(2)     --------->ARR14(2) ------->bZIP910(1)    <----------DOF2          <---------At4g35610--------->TOE2(2)            <---- ------->STF1     <---------GLK1(1)     --------->ARR14(2)        --------->MYB46(3)            ----- -----TGA2(2)     --------->GLK1(1)     <---------ARR14(2)        <---------MYB55(2)            <---- ----->TGA1      --------->ARR11(3)  ------->GAMYB  --------->ARR14(2)   ----------->ARR10    ------- ----->HVH21     <---------ARR11(3) <------------MYB.PH3(1)       <---------MYB52(2) <-------TEIL   acgtggcaagggatatgaagaactcctttctgagcgtaaccgtattcttgagcggatcggtttagcaaaccaacgaagatcgggtggttcataagctctg  5645000                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                        --------->SPL7                           <---                                          <---------ANAC55(2)                                    <---                                          <---------ANAC58                                       <---      --------->ANAC58               <---------------AtSPL3                                      <---      <---------MYB52(2)         --------->ETT(2)      ------>NtERF2                             <---      --------->ANAC58        <---------ANAC46      --------->LBD16                              ----      --------->ANAC46       <------NtERF2--------->TGA1a<---------DEAR3(1)                     -----   --------->MYB46(3)       ------>NtERF2 <---------ANAC58                                      <----  ==================================================MYC_MYB --------->ALFIN1                    <----  -------->P               --------->DEAR3(1)      <---------ANAC46                            <----- -----ZAT14                ----------->HVH21      --------->ZAT2                               <----- ---->ZAT14               --------->DEAR3(2)----------->HVH21             <---------ZAT2      <------ -----ZAT18             --------->ANAC46  --------->ANAC55(2)  --------->WRKY38(1)         --------->ANAC46 --->CDC5------->TEIL  ------>ZmHOX2a(1) <-------TEIL ----------->HVH21   --------->ZAT2  <---------LBD16   cgctaaccacgaacctctccatctcctcgccgacgtagacaggtacgtgaccagcggggacggtgttgactcttctagctggacatattgaccacggagg  5645100        --------->REM1(2)       --------->ALFIN1      <-------MYC2      <-------PIF5      ------->MYC2      ------->MYC3      <-------MYC3      ------->PIF5     <---------ANAC58     <---------ANAC46     <------NtERF2     <---------ANAC58    ------>NtERF2   <---------ANAC46  <------NtERF2  --------->ATERF1(1) <---------ATERF1(1) <---------RAP2.6(1) ------>NtERF2 <---------ORA47(2) <---------RRTF1(1) <---------DEAR4(2) <---------DEAR3(2) <---------RAP2.3(1) <---------ERF1 -------->ATERF1(2) ---------RAP2.3(2) ---------RRTF1(2) ---------RAP2.3(3) -------->DEAR3(1) ---------RRTF1(3) -------->ALFIN1 ---------DEAR3(1) ---------ATERF1(2) ------->At4g35610 --------At4g35610 ------->ATERF1(1) ------->DEAR4(2)                                                                                  -- ------->DREB2C(1)                                                                                 <- --------ABI4(1)                                                                                   <- -----NtERF2                                                                                      --- ------->RAP2.3(1)                                                                                <-- --->NtERF2                                                                                       <-- -------ERF1                                                                                      <-- -------ATERF1(1)                                                                                 <-- -------RAP2.6(1)                                                                                 <-- -------DEAR4(2)                                                                                 <--- -------RRTF1(1)                                                                                 <--- -------RAP2.3(1)                                                                                <--- -------ORA47(2)                            --------->ALFIN1                                     <--- ------RRTF1(3)                   <---------ANAC58                                               <--- ----->ALFIN1                     <---------HSFB2a(2)                                            ---- ------RRTF1(2)                   --------->HSFB2a(2)   <---------SPL7                           ---- ------DREB2C(2)                  <---------ANAC58      <---------MYB46(3)                       <--- ------DEAR3(1)                   <---------ANAC46     <---------ANAC46                          <--- ------RAP2.3(3)                  <---------ANAC55(2) <---------LBD16               ------>NtERF2<--- ------RAP2.3(2)                 <---------LBD16    <---------DEAR3(1)            --------->ATERF1(1) ------RAP2.6(2)              <-------GAMYB <---------AtMYB61                    <---------ATERF1(1) ------ATERF1(2)             <---------MYB46(3)    --------->SPL7--------->GLK1(2)<------NtERF2 ----- ----->ATERF1(2)             <---------DEAR3(2)   --------->ARR14(2)             <---------ORA47(2)<- ---->ATERF1(1)             <---------DEAR3(1)   <---------SPL7  <---------ARR14(2)<---------DEAR3(1) --NtERF2                 ------>NtERF2  --------->ALFIN1<------NtERF2           <---------RAP2.3(1)< -----ABI4(1)             ------------>AtMYB77 --------->ALFIN1  --------->ARR14(2)--------->DEAR3(1) ----RAP2.3(1)           ----------->HVH21 <------ZmHOX2a(1)----------->GT1     <---------DEAR3(1)<-- ----ATERF1(1)     ----------->HVH21    <------ZmHOX2a(1)<-------GAMYB         --------->ATERF1(1)<-- ---DEAR3(1)     <---------MYB46(3)--------->LBD16<---------ARR14(2)     <------ZmHOX2a(1)      <----   cggcggcgcgtggagacgatggtgaccgcgacggttgcggaaggaggaggtggaacggcggatggagaattcggaggatgagtcggcgactctagagagg  5645200  <------NtERF2  <-------GAMYB <---------MYB46(3) ------->ATERF1(1) -----NtERF2 --------At4g35610 --->NtERF2 -------ATERF1(1) -------RAP2.6(1) -------ERF1 -------RRTF1(1) -------ORA47(2) ------RRTF1(3) ------RAP2.3(3) ------DREB2C(2) ------RRTF1(2)                              -------->HAHB4 ------RAP2.3(2)                             --------->YAB1 ----->ATERF1(2)                             --------->ATHB12 ----->ALFIN1                    <-------GAMYB ------DEAR3(1)                 <---------MYB46(3) ------ATERF1(2)                <---------DEAR3(2)       <---------AHL20(2) ------RAP2.6(2)                ----------->GT1         --------->AHL20(2)                  --------- ---->ATERF1(1)                <---------DEAR3(1)   --------->AHL20(2)                     <---------AHL20(1) --------LBD16                <---------MYB52(1)  >>>>>>>>>GATA-1                    <---------ANAC55(2) ---------ANAC46             ------>NtERF2  <---------YAB1                           ----------->GT1 -------RAP2.3(1)            --------->LBD16<---------ATHB12                         --------->ANAC55(2) -------DEAR4(2)            <---------DEAR3(1) <---------WOX13(1)                   --------->MYB59 -----ABI4(1)              <---------LBD16 <---------TOE2(3)                ---------->DOF2--------->AHL20(1)   cggcggatgagatgcttcattttttgttctccggcggtttaaactaatgatagataaatttaaaattagagagagtgagaaagagttaagtaatatatat  5645300                                                             <---------ANAC58                                                             <---------ANAC58                                                            ------->TEIL                                                          <---------ZAT18                                                          --------->ZAT18                       <---------YAB1          <---------ZAT18                       ----------->TGA1        <---------ZAT14              ------->GAMYB                     <---------ICU4            --------->ZAT18          --------->REM1(1)         <--                   --------->ARR11(3)          --------->ZAT14         <-------TEIL             -----                   <---------GLK1(2)       <---------------AtSPL8 <-----------RAV1(2)     <----------                 --------->ICU4        <------ZmHOX2a(1)  <---------ZAT14  --------->MYB46(3)   <---- >AHL20(2)  --------->AtLEC2         <---------TOE2(3)  <---------------AtSPL8      --------->AHL20(2)   agagagaagaagacatggaaagattatgacgagagcattgaggagagagtacacatatggtgtacttgccaggtacaacagcccgataaattttacattt  5645400                                    --------->YAB1                   <---------AHL20(2)             -                                    --------->AHL20(2)           <---------AHL20(2)                 - -------YAB1                 --------->ANAC46                    --------->AHL20(2)              ---- ---->AHL20(2)             --------->ZAT6           --------->YAB1   --------->AHL20(2)       <------ -GT1        --------->AHL20(2)     *TSS  --------->AHL20(1)  --------->YAB1            <---------AHL20(2) -----AHL20(2)           <-----------GT1  <---------AHL20(1) ----------->TBP          --------->GLK1(2)   attttagtatacaaatcaaatactatgttacactacaattaaaaaatattagtatcatatactataaaaaattaaacatggacaagagaatttatcaagt  5645500                                                        --------->AHL20(2)                                                        <---------AHL20(1)                                                        <---------AHL20(2)                                                     <---------ICU4                                                     --------->ATHB51                                                     <--------ATHB1                                              <-----------GT1                                          <---------AHL20(1)                                          --------->AHL20(1)                                       --------->AHL20(2)                      <-----------GT1  --------->YAB1--------->YAB1      --------->TOE1(2)                <---------AHL20(2)<---------AHL20(2)      --------->TOE2(2)            <---------AHL20(2)<---------AHL20(1) -------->ANAC58  <---------AHL20(2)--------->YAB1  --------->ICU4                      <----------DOF2 -------->ANAC58 <---------YAB1    --------->AHL20(2)--------->AHL20(2)              <-----------GT1 ----->ZAT18  <---------YAB1     <----------DOF2    <---------ATHB12             <----------DOF2<---- ---ANAC55(2) --------->ICU4     --------->TOE2(3)  <---------ATHB51      --------->TOE2(2)     -----   gaacgaaaactacgagattattatttgccatttttctttaattatatattaccaataatttttttttatacttaaacctatgtctttaaactttataaaa  5645600               <---------AHL20(1)            --------->AHL20(2)            <---------AHL20(1)       <---------ICU4            --------->AHL20(1)     <---------TOE2(3)          <---------AHL20(2)       <---------YAB1          --------->AHL20(1)      --------->AHL20(2)                        <---------ATHB12          <---------AHL20(1)    <---------AHL20(2)                         ------>MYB83       --------->AHL20(2)       --------->AHL20(2)                         ------>MYB46(1)         <-    <----------DOF2          ------->TEIL                                 --------->WOX13(1) <------- --------->ARR11(3)       ----------->GT1                               --------->MYB46(3)  --------- <---------ARR11(3)       <---------ANAC46  <---------ZAT14     <---------ANAC46           <---------ANAC55(2) -----AHL20(2) --------->AHL20(2) --------->YAB1 <---------AHL20(1)   <-----------GT1      <---------ANAC58 ---->AHL20(2) <---------AHL20(2) <---------AHL20(2)          <---------ZAT18              <---------ANAC58   aaatgtctttaaaatattttatttcatgatgtatattaatattgactatagtatatttagctagtggagtttgaaccaatcaattgaaatagtccgtgag  5645700                                                        ---------->DOF2                                                       <---------WRKY12                                                       <---------WRKY38(1)                                                       <---------WRKY45                                                      --------->WRKY18(1)                                              <---------ICU4                                              --------->ATHB12 --------YAB1         ----------->GT1        <---------YAB1 --MYB52(1)           --------->ATHB12     --------->REM1(1)             <------ZmHOX2a(1) >LBD16              <---------YAB1     ------>ZmHOX2a(1)      ---------->DOF2          --------->HSFB2a(1)   tttgattaaaaccaaaatcgagtatgattaaaacaagttgtccttacatcattgtggtcaaagatgaaagaaacaggaaatgttttgcaaaccttctaca  5645800                   <---------ZAT18                   <---------ZAT14                 <---------At4g35610           <---------MYB46(3)        <---------MYB46(3)        <------MYB46(1)        <------MYB83       <---------DEAR3(1)       <---------AtMYB61       --------->MYB55(2)       --------->MYB46(2)       --------->MYB111(1)       <---------MYB46(3)                                             <------ZmHOX2a(1)       --------->MYB111(2)                                     --------->AHL20(1)      <---------MYB55(1)                                       --------->AHL20(2)                   <      <--------P<---------ANAC46                               <---------AHL20(1)                  --     <-------GAMYB --------->ZAT14                             <---------AHL20(2)                ----    <---------MYB46(3)                         <-----------GT1--------->AHL20(2)            <-------- <-----------RAV1(1)                  ---------->DOF2       --------->YAB1               ----------->GT1   tatatgtggttggtggttcagtagacttgataagtttattcaaagtattttacatatagtactaataaattaggagttttgtttgtttttgtagtaaatt  5645900  Previous    Next  AGI:  At1g16510.1    Description:  auxin-responsive family protein. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G79130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47913.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 5644565    to: 5645436    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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