Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ANAC46                                                  <-----------HVH21                                                ------->MYC3                                                <-------MYC3            --------->AHL20(2)                                               <---------O2             <---------AHL20(2)                                <---------ZAT14--------->TGA1a         --------->ICU4 --------->ANAC58                                --------->ZAT14<---------TGA1a    ----------->GT1     --------->ANAC58 ->DOF2     <---------YAB1   ------>ZmHOX2a(1) --------->O2      <---------TOE2(3) --------->DEAR3(1)   tctggtgaagtttgatgatggtgtcttcttcctctgcactgaaattgccacgtttcacatcaggtctgaggtaattaatccatcgcagacgacaactctt  5630600               ------>ZmHOX2a(1)              --------->TOE2(3)                                                                  ----         --------->MYB46(3)                                                        <------ZmHOX2a(2)    --------->TOE2(3)   --------->AtLEC2                                           <---------YAB1----    --------->AtMYB61 <---------ANAC58                                            <---------ARR11(3)   --------->ANAC46   <---------AtLEC2                            ---------->DOF2 --------->ARR11(3) --------->REM1(1)    <---------ANAC58                        ---------->DOF2 ---------->DOF2    <--- <---------ALFIN1--------->ATHB12     --------->YAB1    ---------->DOF2   <----------DOF2    --------   gccacacctcaacaatccttcattgcatgcatagatagaatcagaaccagaagactagaaaagctaaagaaagaggcttttaaagatcatagacatacca  5630700               ------>ZmHOX2a(2)              <---------GLK1(1)              <------ZmHOX2a(2)              --------->GLK1(1)             <---------ARR14(2)             --------->ARR14(2)             <---------ARR11(3)             --------->ARR11(3)   <----------DOF2  <---------ANAC58  <---------ANAC58 ----->ZAT2  --------->ARR14(3) ----->At4g35610         --------->YAB1           --------->CCA1(2) ------ZAT2 <---------GLK1(1)                ---------->DOF2          <---------ICU4           <----- ->MYB52(1) --------->GLK1(1)          <---------YAB1                <---------YAB1   ------>ZmHOX2a(1)   gcttgctttgggagagatctccaattctcatgaccattcttgtgaatgaaagagatgagtttcaagtcttcatcatggctccatggtcctctcttcactt  5630800                                                                                                 <---                                                                         --------->GLK1(1)      <----                                                                         --------->GLK1(2)      <----                                                                        <---------GLK1(2)       <----                                                              <---------ALFIN1         --------->ARR14(2)                                  <---------ARR14(2)        <---------ALFIN1           <---------ARR14(2)      <-----------GT1             --------->ARR14(2)        --------->ANAC58          ------>MYB46(1)    <-----------HVH21    <----------DOF2       ------>ZmHOX2a(1) <----------DOF2      ------>MYB83 -----DOF2       <---------ZAT18  <---------GLK1(2)         --------->ANAC58        <---------MYB59   tggttttgtcacaacatggtgctcttcctttgcccatattctctctctcctctctcacagacacacacttttgagattccctcttaccaaatccaattgc  5630900                                      ------>ZmHOX2a(1)                                      ----------->HVH21                                    ------>ZmHOX2a(2)                                  --------->ARR11(3)                                              <--                            --------->ALFIN1                                              --------->ARR14(2)                            <---------ANAC46                                              <---------ARR14(2)          <---------AHL20(2)<---------ANAC58                                              <---------GLK1(2)  <---------ANAC46          <---------ANAC58                   ----------->RAV1(1)      *TSS <------- -------DOF2              <---------ANAC46                    --------->MYB46(3)    --------->TGA1a-- -----ANAC58              <---------ANAC58                  --------->ANAC46        --------->bZIP60(1) -----ANAC58              <---------ANAC58                  <-----------GT1         <---------bZIP60(1) -----ANAC46           --------->ALFIN1 <<<<<<<GRF7  ----------->GT1            <-----------HVH21 <--   ttttatgtgtatttatacatgagaagtggtgtgtgtgatcctgacattgagaaacatgttataaaccacagacattgacaaatgtcacatcagatttgtt  5631000                                           <-----------GT1<------------CBF                        ---                              <---------ARR14(2)        <---------AHL20(2)                       <--- -------TOE2(3)               --------->ARR11(3)        <---------YAB1                  --------->YAB1 --MYB46(3)                   --------->GLK1(2)       --------->YAB1                  --------->ICU4 --------->GT1                --------->ARR14(2)    <-----------TBP      --------->GLK1(1) --------->AHL20(2) -------TOE1(3)  <------------CBF ----------->GT1<----------DOF2    <---------ZAT18   <---------YAB1<   gaggttaaaaacttgtctatattgtggatgagtatctggcaaaattcacatcttttttataattgtatagttcgcatttctatatgtcattaataaacta  5631100                                                                                                   --                                                                                                   --                                                                                                 ----                                                                                                 <---                                                                                       ---------->DOF2                                                                             <---------YAB1    <-----                                                                           <---------ICU4      <-----                                                                           --------->YAB1--------->ICU4 --------->YAB1                                                           <---------ATHB12<---------ICU4 ------>YAB1                                   <---------GLK1(2)          --------->ICU4 <---------YAB1 ------YAB1             <---------At4g35610    --------->ARR11(3)       --------->WOX13(1)--------->ATHB12 ---------YAB1          --------->At4g35610  ----------->ARR10    <---------AHL20(2)   --------->YAB1   ttatgaaaatgtaatcaactaaacacagatgaaacatgtttgaaacttagatactgagtctcatattttttattcaatcatgaaacctataaagattgcc  5631200                                                                                             --------      <---------ATHB12                                                                      <--------     ------>MYB46(1)                                                                       <---------AHL20(2)     ------>MYB83                                                                          <---------AHL20(1)    --------->WOX13(1)                      ----------->GT1                                --------->AHL20(2) ------->WRKY12                             <----------ID1                             ------>ZmHOX2a(1) --------->HVH21                     ---------->DOF2                             <---------MYB52(1) ----->At4g35610                --------->bZIP60(1)                             <-------GAMYB<------- ------At4g35610                <---------bZIP60(1)  --------->AHL20(2) <---------YAB1--------->TOE2(3) ----ANAC58                  <---------YAB1----------->GT1         ------>ZmHOX2a(1)<---------YAB1 ----ANAC58              <----------DOF2 ---------->DOF2 --------->RVE1(1)   <---------ZAT18---------   tctgaccaatctataagttgaatccatctttatgatgtcaaaagaaaggaaaaaaaaaaatacctgttcctgtgattagtgctgttatcctaaattattt  5631300                                      <---------MYB46(3)                            --------->LBD16                           --------->ANAC46                           --------->ANAC58         <---------------AtSPL3       ----------->GT1       <-----------RAV1(1) <---------ANAC55(2)                                                     >> ->AHL20(1)                --------->ANAC58<---------YAB1                  <---------ANAC58        >> -AHL20(2)             ---------->DOF2--------->MYB52(2)                   <---------ANAC58        >> --AHL20(2)     <---------At4g35610   --------->MYB46(2)      --------->CCA1(2)                    >> >AHL20(2)      --------->At4g35610 <---------MYB52(1)     <---------TOE2(3) --------->ALFIN1     <--   tgactaattttgttgtactgctgcaaaatgcgcaactcgttagttaatattagctaattttgagatttgactaattagggtgtctgagtcaaatcagata  5631400           <---------AHL20(2)          <---------AHL20(1)          --------->AHL20(2)          <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)       <---------AHL20(1)       <--------ATHB1       --------->YAB1       <---------ICU4      <---------ATHB51      --------->ICU4    --------->YAB1   <---------YAB1 ----------->GT1 >>>>>>>ARR2                                                <-----------GT1 >>>>>>>ARR2                                --------->MYB52(1) >>>>>>>ARR1                        <----------DOF2       <---------AHL20(2) >>>>>>>ARR1  <-----------GT1     ------>MYB46(1)    <---------AHL20(2)                        <----- ----ZmHOX2a(1)                   ------>MYB83 ----------->GT1<---------------AGL15  ----------->GT1   ggattgtaataatttttttctgtctatggctataccaacttttgaaaaacggttttaaattttaacaaaatgagaaagtttgataagtggaaatttcatg  5631500  Previous    Next  AGI:  At1g16490.1    Description:  AtMYB58 (myb domain protein 58); DNA binding / transcription factor. similar to AtMYB63 (myb domain protein 63), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G79180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47909.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65146.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IP Range:  from: 5629648    to: 5630988    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version