Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------TOE1(2)                     <---------TOE2(2)                    <-----------RAV1(2)               --------->KAN4(2)               --------->ARR14(2)               <---------ARR14(2)              <----------TaMYB80              <---------KAN4(1)              <---------HSFB2a(1)                                                      <---------ANAC58              --------->KAN4(1)                                                        <---------ANAC55(2)              --------->HSFB2a(1)                                                      <---------ANAC55(1)             <---------KAN4(2)                                                         <---------ANAC58             ---------->TaMYB80                                                        <---------ANAC46          --------->LBD16                 <---------ARR14(2)            --------->RAP2.3(3)         <---------HSFB2a(2)              --------->ARR14(2)            --------->RRTF1(2)         --------->ANAC46          <------NtERF2                        --------->RAP2.3(2)         --------->HSFB2a(2)     <---------DEAR3(1)                     --------->ANAC58            <         --------->LBD16      ----------->HVH21                         --------->ANAC58         <---        <---------HSFB2a(2)--------->At4g35610           --------->ATHB12--------->LBD16  <---------ARR14(2)     <---------GLK1(1)     <---------At4g35610       ----------->GT1    --------->RAP2.6(2)----------    <---------GLK1(2)<---------TOE1(3)   <------ZmHOX2a(1)       ---------->DOF2  <---------GLK1(2) < >SPL7  <---------LBD16 <--------P------>NtERF2     <---------TOE2(3)  --------->RAP2.3(1)--------->ARR14(2)   ctcttagattcccggaatattctcaggttagctcgacggcgaaggatttgatcaaaggtttattggtaaaagagccgcaaaacagaattgcgtataagcg  5617400                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                                    ------>NtERF2                                                                                   --------->ARR14(2)              --------->ANAC58                                                     <---------ARR14(2)              --------->ANAC46                                                    <------NtERF2             --------->WOX13(1)                                                  <---------ATERF1(1)           <------ZmHOX2a(2)                                         ------>NtERF2--------->ATERF1(1)          --------->ARR11(3)                                         --------->ABI4(1)     <---------ANAC46                                               --------->DREB2C(2)      --------  ----------->HVH21                                     <---------LBD16         --------->ETT(1)  <------NtERF2                                        <---------ANAC58        <---------LBD16 ------>NtERF2--------->ANAC58                    ----------->ARR10 --------->DEAR3(1)<---------DEAR3(1) ---------ANAC58                                <-------GAMYB       --------->ANAC46<---------ZAT2  < ------DEAR3(1)       <-------TEIL             <---------DEAR3(1)<---------ALFIN1--------->LBD16  <-- >DOF2   --------->GLK1(1)          ----------->GT1    <---------ANAC46<---------ALFIN1 <---------MYB52(1) ---------ANAC58 ----------->RAV1(1)--------->ALFIN1   <---------ANAC58----------->RAV1(1)   <-------   aggcgcgacggagatcaagcaacatccattttttgaaggtgtgaattgggcgttgattcgtggagaaacaccgccacatttgccggagccggtggatttc  5617500                                            ------->GAMYB                                           --------->ANAC58                                           --------->ANAC58                                          --------->At4g35610                                         --------->MYB52(1)                                       --------->ATERF1(1)                                       <------NtERF2                                      <---------ATERF1(1)                                      <---------RAP2.3(1)                                      --------->RAP2.6(2)                                     <---------DEAR3(1)                                     --------->ATERF1(2)                                     <---------ATERF1(2)                                    --------->RAP2.3(1)                                    <------NtERF2                                    --------->ATERF1(1)                                   --------->LBD16                                   <---------RAP2.3(1)                                   <---------ORA47(2)                                   <---------ERF1                                   <---------DEAR4(2)                                   ------>NtERF2                                   <---------ATERF1(1)                                   <---------RAP2.6(1)                                  <---------DEAR3(1)                                  <---------ATERF1(2)                                  --------->ATERF1(2)                                  --------->DEAR3(1)                                 --------->RAP2.6(1)                                 <---------LBD16                                 <------NtERF2                                 --------->ATERF1(1)                                 --------->DEAR4(2)                                 --------->ORA47(2)                                 --------->RAP2.3(1)                                 --------->ERF1                                <---------RAP2.3(1)                                <---------ATERF1(1)                               --------->ATERF1(2)                                              <----     <---------ANAC46          <---------ATERF1(2)                                             ------     <---------ANAC55(2)       --------->DEAR3(1)                       <---------At4g35610    ------ ->GLK1(1)                    <---------RAP2.6(2)                      ------->TEIL          ------>ZmHOX2a(2) ---------ZAT6            <----------DOF2----------->RAV1(1)--------->ARR11(3)             --------->ARR11(3) -------ANAC46       <------ZmHOX2a(1)------>NtERF2         <---------ARR11(3) ---------->DOF2 <----- --GLK1(1)     <------ZmHOX2a(1)------>NtERF2  ---------->DOF2      <---------REM1(1)    <---------ZAT6   tcgtgttatgtgaagaaggagaaggagtctttgccgccggcggcaacggaaaagaagagcaagatgtttgatgaagctaataagagcggtagtgatcctg  5617600                                                           <---------DEAR3(1)                                <---------YAB1         --------->HSFC1(2)                              --------->YAB1       --------->ANAC55(2)                              <-----------GT1      --------->ANAC55(1)                       <-------                           <---------ICU4          --------->ANAC58                         ---------                           --------->YAB1          <---------ANAC55(2)                     <---------YAB1  <------------CBF        --------->ICU4           --------->ANAC58    ---------->ID1 --------->CCA1(2) -----ICU4     --------->AHL20(1)                --------->ZAT6    <---------DAG2    <---------ARR11(3) --->ICU4      --------->ARR11(3)           <---------REM1(1)<------NtERF2     <----------DOF2 >ZmHOX2a(1)   <---------AHL20(1)   --------->AHL20(2) <---------HSFC1(2)<----------DOF2 <-----------GT1 ----YAB1      <---------ARR11(3)   <-----------TBP--------->ANAC46<----------DOF2   --------->ARR11(3)   attacattgtttttgaatatttttagccataatcaccattatatagttgtaacacgaaacgtcgtcgtgctttttctttttctttgagatataactattg  5617700                                                                           <------ZmHOX2a(2)                                                                          <---------ARR14(2)                             ----------->GT1                              <-----------ARR10       ---------->DOF2      <---------TOE1(3)                             --------->ARR14(2)     --------->ARR11(3)   <---------MYB52(1)                 --------->AHL20(1) <------NtERF2    <---------YAB1                             <---------AHL20(2)   <----------DOF2 -----CBF   ------------>CBF<---------TOE2(3)                <---------AHL20(1) --------->HSFC1(2) >ATHB12--------->DAG2  <---------HSFB2a(2)    <---------ZAT6--------->AHL20(2) <---------HSFC1(2)---   ggccgaagataaagcccaatatgattctgtaaggtttttttagacccaagtgtaagaaaacattttattaagagcagatcgaagctttgtttaaaaactc  5617800        <---------ANAC46       <------NtERF2       <-------GAMYB       --------->ATERF1(1)       --------->ZAT2       <---------At4g35610       --------->At4g35610       <---------ZAT2      <---------ERF1      <---------RRTF1(1)      ------>NtERF2---------->DOF2      <---------RAP2.3(1)                                                      ---------->DOF2      <---------MYB46(3)                                                     --------->LBD16     <---------RAP2.6(2)                                                    --------->ANAC46     --------->ATERF1(2)                                                    --------->ANAC58     <---------RRTF1(2)                                                     --------->ANAC58     <---------ANAC58                                                      <---------LBD16     <---------RAP2.3(2)                              ------>NtERF2--------->DOF5.7(2)     <---------RAP2.3(3)                             <---------ANAC58    ------>MYB46(1)     <---------RRTF1(3)                              <---------ANAC58    ------>MYB83     <---------DREB2C(2)                            <------NtERF2  <---------MYB52(1)     <---------ANAC58                             <---------DEAR3(1)     <---------ARR14(2)     <---------ATERF1(2)                   ------>ZmHOX2a(1)     --------->ANAC46     <---------DEAR3(1)                <-----------GT1<---------ZAT18    --------->ARR14(2)     <---------ANAC46                 <-----------GT1<---------ANAC46  <---------MYB59    --------->RAP2.6(3)              <---------AHL20(2)<------NtERF2  <---------ANAC55(2) --------->CBF  <----------DOF2     --------->AHL20(2)--------->ZAT18 --------->ANAC55(2)   agcaatggcggctgggttctttcaagcagagatgtcaattttatcctctacgttggcgcgctcatactcgttacctatccgcaaaacgcttatgaccttc  5617900                                                           <----------DOF2                  <--------                   ------->GAMYB                      <---------At4g35610           --------->ANAC58                  --------->ANAC58                    --------->At4g35610           --------->ANAC58                  --------->ANAC58            <---------ANAC58                      --------->ANAC55(2)                  <---------MYB52(2)          <---------ANAC58                      --------->ANAC46             --------->AtLEC2       --------->ARR14(2)<---------ZAT2      ------>ZmHOX2a(1)<---------   gattttcgaattgcaatgcaacgaaacccttgtctcagaattcgacgttcttgtgtagctgcttttagctcgactccttcgcattcacgaaattttccaa  5618000                                                                             --------->TOE2(3)                                                                           ------->TEIL                                                                          <---------CCA1(2)                                                                      --------->At4g35610                                                                     --------->GLK1(2)                                                                   --------->HSFB2a(1)                                        <---------YAB1             <---------ZAT2  -------->HAHB4              ----------->HVH21    <---------------AGL15           --------->HSFC1(2)          --------->ATHB51         ----------->GT1                 <---------HSFB2a(1)          <---------AHL20(2)       --------------->AGL15           <---------HSFC1(2)<---------TOE2(3)          --------->AHL20(2) --------->ANAC46                      <---------At4g35610          --------->ATHB12-------->P <---------YAB1            --------->ANAC46    --------->YAB1  --  ----------->GT1      --------->At4g35610                     --------->ANAC58    <---------ICU4<--- ---GT1  <---------AHL20(2) ----------------->AG               --------->ANAC58   --------->ICU4<---- --GT1   --------->ICU4<---------At4g35610  ---------->DOF2   <---------LBD16--------->YAB1     <----   ttcgaggtgaaattatttgacatttagctacccaaaactgttattagaaaggaattgagttagacacggagcttctgaatcttaattatcgtttatttgc  5618100                                                                                              =======                                                                                              <------                                                                                  ===================                                                                                  ------->GAMYB -----                                                                                 --------->ANAC58                                                      ===============================================                                                      <-------GAMYB              --------->ANAC58                        ------>ZmHOX2a(1)            <---------MYB46(3)         --------->At4g35610-- -------->DOF2      <-----------GT1                  <------MYB83              --------->MYB52(1)  <- -------DOF2    <----------DOF2                  <-----------RAV1(1)        --------->ANAC58  ------- -----ANAC58    <---------DAG2           <------ZmHOX2a(1)                  --------->ANAC58  ======= -----ANAC58 <-----------GT1     <------ZmHOX2a(1)   <------MYB46(1)  <------ZmHOX2a(1)       =======   ttaaagttcagttttttacttttttcctcgtttcaggactagaggatgtttttgttggttatctatttgggaggaagaaggcaacggaagtagctcatgt  5618200     <----------DOF2      --------->YAB1 ===============bZIP_DOF --------->AHL20(2) ---TGA1a           --------->AHL20(2) ===MYC_MYB       --------->TOE2(3) ---->ALFIN1      --------->TOE1(3) ===MYC_MYB       <----------DOF2   --------->AHL20(2) ------------->AtSPL8   <---------AHL20(2)                                    <----------DOF2 --------------AtSPL8--------->AHL20(2)                          ---------->DOF2    <---------CCA1(2) -->TGA1a   ------->GAMYB<---------AHL20(2)                     <---------AHL20(2)--------->ANAC55(2) ===================MYC_MYB  --------->YAB1         --------->ANAC46  <----------DOF2------->TEIL ===============bZIP_DOF--------->AHL20(2)          --------->ANAC55(2)       <---------DAG2   ------   gtgagtactttcaacccaaactttaaattaataacaaaaaaaatgacttcttatacgtcttcacatttaaagcttttagactttatgtatctcaatagct  5618300  Previous    Next  AGI:  At1g16440.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G79250.1); similar to viroid symptom modulation protein [Lycopersicon esculentum] (GB:AAF66637.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 5616259    to: 5617666    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g16445.1    Description:  methylase-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO47887.1); contains InterPro domain Putative rRNA methylase (InterPro:IPR010719) Range:  from: 5617805    to: 5619328    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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