Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ANAC46                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                          ----------->HVH21                                   -------    ----------->GT1            <---------YAB1 --------->At4g35610                             -------  --------->TOE1(2)       <---------ZAT2  ----------->TGA1                         --------->At4g35610 ------>TEIL              --------->At4g35610 <---------At4g35610               <------ZmHOX2a(2) ---->ANAC46              <---------At4g35610<---------ANAC46                  <---------ARR11(3) -->ZAT6             --------->TOE2(3)   ----------------------->TaNAC69(2)    --------->ARR11(3)   tgaacctagtaaaaaaaactcaaccttgagctgatcatacagtagtgacgctgaattcgccatttctatagtagagcttaagatcagataacaaaacctc  5590500                                        <---------YAB1         --------->YAB1               --------->YAB1   --------------->AGL15             <---------YAB1                                           -------   <---------------AGL15          --------->ICU4                                             --------   --------->HSFB2a(2)     ---------->DOF2                                                   <-------  ===================================================================================================  ----------------->AGL1 --------->ANAC46                                                    <-------  ----------------->AGL2 --------->ANAC58                    <---------AtLEC2               <------ZmHOX2a(1)  ----------------->AGL3 --------->ANAC58<---------ICU4   ------>ZmHOX2a(2)               <---------TOE2(3) -->TOE2(3)  --------->GLK1(2) <---------ARR11(3)        --------->At4g35610       <---------TOE2(3) -->TOE1(3) <---------GLK1(2)  --------->ARR11(3)        <---------At4g35610    <---------ATHB12   aacttccaaaatcagaatctaaaattcacgaaagaacttatgataatttctctacattgatctgcatcgaagaaaatcacaaatcaaggatttaggattc  5590600                                                                                               ------                                                                                               <-----                                                                                           --------->ZAT6                                                                                         ------>NtERF2                                                                                         ----------->RAV1(1)                                                                                         ============  <----------DOF2                                                                    --------->ANAC58 <-----------------AGL3                                                              --------->ANAC46 -->GLK1(2)                *TSS                                                      --------->ANAC58 ->ARR14(2)         <---------ZAT6                   <------------CBF              --------->CCA1(2) --ARR14(2)         <---------ANAC46      ----------------->AGL1                  --------->ARR14(2) ==================MADS_MADS          --------->At4g35610         <------NtERF2   <---------ARR14(2) --GLK1(2)     <---------REM1(1)      <---------At4g35610------------>CBF <---------------AtSPL3  <--   tgacctttaactggaagttgtagtgtgagtgaaggcagtgagatgccaaaatagaaattgccaatggccgagaggtgatgttcggatacgccaacagtac  5590700                  <---------YAB1                --------->YAB1                <--------HAHB4               --------->ICU4                              ----------->GT1         ----------->GT1                                 <---------ATHB12        --------->ALFIN1                                --------->MYB52(1)        <------NtERF2                                   ------>MYB46(1)   --------->GLK1(2)      <---------bZIP60(2)                               ------>MYB83   <---------AHL20(2)      <---------ANAC46                             <-----------GT1    <---------AHL20(2)      <---------ANAC58                         --------->TOE2(3)      <---------AHL20(1)      <---------ANAC58  --------->LBD16        <-------GAMYB          --------->AHL20(2) ----------->RAV1(2)  <---------LBD16         ------>ZmHOX2a(2)       --------->AHL20(1)   <---------AHL20(2) --->ZAT14     <---------YAB1                 ----------->GT1<---------MYB52(1)  <---------AHL20(2) ----ZAT14   --------->YAB1  <---------AHL20(2)--------->TOE1(3)  <---------AHL20(2)   ----------->GT1 ============RAV<---------ICU4              <---------ARR11(3)    --------->AHL20(2)   <------MYB83 ---------HVH21<---------ATHB12             --------->ARR11(3)   --------->AHL20(2)    <------MYB46(1)   tgtccctggcgtggataatcattatccggttttaattcaattcatagatcgttaaaccaatcggttaataaataaaattctatttgatttggtttaattt  5590800                                                                 -------->P                                                                 ------>MYB46(1)                <----------DOF2   <---------MYB52(1)             ------>MYB83        <---------ANAC58             <-----------GT1    <---------ANAC58               <---------MYB111(1)   <---------ANAC58            <-----------GT1     <---------ANAC58         --------->TOE2(3)    ------->TEIL       --------->LBD16   ------>MYB46(1)          --------->ANAC58      <---------ALFIN1     <---------LBD16     ------>MYB83             --------->ANAC58    ------>ZmHOX2a(1)  --------->ZAT6   <---------ARR14(2)   ----------->RAV1(1)      ------->TEIL  <---------MYB46(2)   --------->ZAT2   --------->ARR14(2) --------->MYB46(3)   <----------DOF2<-----------HVH21 --------->ZAT14 <---------DEAR3(2) <-----------GT1   ---------->ID1     --------->TOE1(3)--------->ANAC46   cttcggttccggttttatcttttcaccaacattttcgtttgtcatctttcgcacctaaaccttcacctactcctccactgaaccctagcttacactcact  5590900                                                                            <---------------------WRI1                          <------------CBF                                 --------->ANAC58                       ------>NtERF2             <---------ARR14(2)        --------->ANAC58                      --------->ANAC58           --------->ARR14(2)      ---------->DOF2                      --------->ANAC46        >>>>>>>GRF7           <---------ZAT2                      --------->ANAC58     <-----------HVH21        --------->At4g35610                   --------->DEAR3(1)    --------->ARR11(3)         --------->ZAT2         --------->ARR14(2)                  <------NtERF2          <---------ARR11(3)  <---------GLK1(2)             <---------ARR14(2)           <------------CBF <-----------RAV1(1) <------ZmHOX2a(1)   <---------At4g35610   --------->YAB1   gttcatttctctctattggcatcgacgccattgttggactgaagatgtcaggattcgaagatggattttcagctgaaaagctattctcacaaggatactc  5591000                                                           --------->ANAC58                                                           --------->ANAC58                                                     --------->RAP2.3(1)                                                     --------->ATERF1(1)                                                     <------NtERF2   ------->MYC3                                                    ------>NtERF2    <-------MYC3                                        <---------DAG2--------->DEAR3(1)     --------->ZAT2                              --------->ANAC46      <---------RAP2.3(1)      --------->At4g35610     ------>MYB83           <---------ALFIN1       --------->bZIP60(1) <-----------HVH21     ------>MYB46(1)      --------->AtMYB61     ----------->HVH21   --------->ANAC46              <--     --------->SPL7       <---------ALFIN1      ----------->TGA1    --------->O2         <---------ALFIN1   --------->TOE1(2)     --------->ANAC46     <---------At4g35610   --------->ANAC58  --------->PCF2   --------->TOE2(2)   <-----------GT1  <----------DOF2------>NtERF2--------->ANAC58 <---------PCF2   atacacctacgacgatgtgatatttctaccacacttcatcgacttttccactgacgccgtctcgctatccacgcgtctcagcaagcgcgtcccactctcg  5591100                                                <---------ZAT2                                                --------->ZAT2                                                <---------At4g35610                                          ------->MYC3                             <---------ZAT18                                          <-------MYC3                             <---------ZAT14                                         --------->PIF3(3)                         --------->ZAT14                                         <---------TGA1a                           --------->ZAT18                                         --------->TGA1a                        <---------ANAC58         <---------DEAR3(2)              <---------O2                     --------->YAB1      <-----------HVH21            --------->GLK1(1)                   --------->ARR14(2)     <---------ANAC58      <-----------HVH21    --------->At4g35610    <---------ARR14(2)   ---------     <---------ANAC58    <<<<<<<<<SUP    --------->O2       <---------At4g35610 <---------ANAC58-----  --------------------->WRI1  <---------LBD16 <---------RAP2.6(2)     <------ZmHOX2a(1)  <---------YAB1 ----ZmHOX2a(2) --------->DEAR3(1)<---------GLK1(2)       <---------RAP2.3(3)<---------GLK1(2) ------   atcccatgcgtcgcttcgccgatggacactgtctcggaatcccacatggctgctgcaatggctgctcttggaggaatcggaatcgtgcactataactgcg  5591200                                ---------->DOF2                                             <--------                            --------->ANAC58                                                <------MYB83                         <---------MYB52(1)                <---------At4g35610              <------MYB46(1)                         ----------->HVH21                ----------->HVH21               <---------WOX13(1)                        <-----------TGA1              <---------ANAC58                   --------->ARR14(2)                        <-----------HVH21             <---------ANAC58              ----------->RAV1(1)                       --------->ANAC46         <---------YAB1                    <---------ZAT14          --------->ANAC58  --------->ANAC46 <---------ARR14(2)                   --------->ZAT14 <-- >TOE1(2) --------->ANAC58  --------->ANAC58 --------->ARR14(2)       --------->AHL20(2) <---------GLK1(2) ------>RAV1(1)   <---------MYB52(1)   <----------DOF2<---------ANAC46<---------AHL20(2) <---------ARR14(2) ----->HVH21     <-------GAMYB--------->At5g28300     <---------RAP2.6(2)         <---------ZAT18<---   acatcgatactcaagcttccgttatccgtcacgctaaatcgcttcaagttccgattgcgtctgatgctgtttttaaatgcccagagcaccagattggttc  5591300                                                                                            <--------                                                                                       <---------At4g35610         --------->MYB59                                           <---------CCA1(2)   --------->At4g35610     --------->ARR11(3)                              <-----------GT1   <----------DOF2--------->MYB59   <---------YAB1                          ----------->GT1     --------->AHL20(2)  ------------>MYB.PH3(2) -MYB46(3)                            ----------->HVH21   <---------ATHB12      ---------->DOF2 -----GAMYB    ------>ZmHOX2a(1)      --------->DEAR3(1) --------->ANAC58   --------->At4g35610 --------RAV1(1)       <---------TOE1(2) <---------ANAC46--------->ANAC58   <---------At4g35610   tgttgatgattttggtccttcttccttcgtttttgtctcgcagacgggtataatttcacaatcaatttcataccttttagctgaaagttagctactttca  5591400  Previous    Next  AGI:  At1g16340.1    Description:  ATKDSA2/ATKSDA; 3-deoxy-8-phosphooctulonate synthase. similar to AtkdsA1 (Arabidopsis thaliana KDO-8-phosphate synthase A1), 3-deoxy-8-phosphooctulonate synthase [Arabidopsis thaliana] (TAIR:AT1G79500.4); similar to AtkdsA1 (Arabidopsis thaliana KDO-8-phosphate synthase A1), 3-deoxy-8-phosphooctulonate synthase [Arabidopsis thaliana] (TAIR:AT1G79500.3); similar to AtkdsA1 (Arabidopsis thaliana KDO-8-phosphate synthase A1), 3-deoxy-8-phosphooctulonate synthase [Arabidopsis thaliana] (TAIR:AT1G79500.2); similar to unknown [Populus trichocarpa] (GB:ABK93946.1); contains InterPro domain DAHP synthetase I/KDSA; (InterPro:IPR006218); contains Inter Range:  from: 5587887    to: 5590627    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g16350.1    Description:  inosine-5'-monophosphate dehydrogenase, putative. Identical to Probable inosine-5'-monophosphate dehydrogenase [Arabidopsis Thaliana] (GB:Q9SA34); similar to inosine-5'-monophosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G79470.1); similar to inosine-5'-monophosphate dehydrogenase [Camellia sinensis] (GB:ABU94684.1); similar to inosine monophosphate dehydrogenase [Glycine max] (GB:CAB38030.1); similar to inosine monophosphate dehydrogenase [Vigna unguiculata] (GB:AAO40253.1); contains InterPro domain IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); contains InterPro domain IMP dehydrogenase/GMP reductase; (Inte Range:  from: 5590945    to: 5593001    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version