Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------YAB1                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                      <---------YAB1                                                    --------->AHL20(2)                                                    <--------HAHB4                                                    -------->ATHB1                                                    --------->ATHB51               --------->ARR14(3)                   <---------ICU4               <---------ARR11(3)                   --------->YAB1               --------->ARR11(3)                  <---------ATHB51          <------ZmHOX2a(2)                        --------->ICU4                                   -         --------->ARR11(3)                        <---------ATHB12  <---------ALFIN1           -----        <------ZmHOX2a(1)                        --------->WOX13(1)----------->RAV1(1) <-----------HVH21  <---------YAB1    <---------ALFIN1  <-----------GT1--------->AHL20(1)              <---------ARR11(3) ----->ANAC55(2)   <---------ZAT14   <-----------GT1<---------AHL20(2)   --------->At4g35610    -----   tgtgatgagaggatcaaggtctccactgtgttaaacatttttcccccttgtcaattattttaatagttccaacacagttgaacacaagatgtcacaacaa  5590200                                             <----------DOF2                                           <---------YAB1                    <-------GAMYB         <---------ARR11(3)                   ----------->GT1        <---------AHL20(1)       <----------DOF2                    --------->ARR11(3)    --------->ARR11(3)                    --------->AHL20(1)                             <------ZmHOX2a(2)    <---------ARR11(3)                   --------->CCA1(1)     --------->SPL7      <---------GLK1(2) --------->DOF2    <---------MYB46(3)    --------->RVE1(1)   <---------SPL7        --------->ARR14(2) ---->ANAC58      <---------YAB1   ---------->ID1        <-----------GT1           <---------ARR14(2) ---->ANAC58 --------->YAB1    <----------DOF2       <----------DOF2           <---------LBD16   gaaaaagagcttcaatggtgatggttacacatactttgtcgaaatatctttgatgcttttagccatacgaagaacatgctcttcggattcgatcacattt  5590300                                                  --------->SPL7                                                <---------SPL7                                                <---------SPL1(2)                --------->RAP2.6(3)            <---------ANAC58         --------->YAB1                        <---------ANAC58   ------>MYB46(1)                 <---------ATHB12                                --------->AHL20(2)   ------>MYB83--------->MYB52(1)  --------->ICU4<---------SPL1(1)                --------->AHL20(2)-  --------->ANAC58         -------->P         <---------------AtSPL3     --------->LBD16        -----  --------->ANAC58      <---------At4g35610   --------------->AtSPL3   <---------LBD16        ------- --------->MYB46(3)     --------->At4g35610 ------------------>SPL14 <-----------GT1   --------->AHL20(2)   ggaccagccaataagaaaaacggctcagcaacctgcaatgagtcattgtccgtacgataagataactcaattcaccggaagaaaataaaaaaaataacac  5590400                                                      --------->ANAC46                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                          ----------->HVH21                                   -------    ----------->GT1            <---------YAB1 <---------At4g35610                             -------  --------->TOE1(2)       <---------ZAT2  ----------->TGA1                         --------->At4g35610 ------>TEIL              <---------At4g35610 --------->At4g35610               <------ZmHOX2a(2) ---->ANAC46              --------->At4g35610<---------ANAC46                  --------->ARR11(3) -->ZAT6             --------->TOE2(3)   ----------------------->TaNAC69(2)    <---------ARR11(3)   tgaacctagtaaaaaaaactcaaccttgagctgatcatacagtagtgacgctgaattcgccatttctatagtagagcttaagatcagataacaaaacctc  5590500                                        <---------YAB1         --------->YAB1               --------->YAB1   <---------------AGL15             <---------YAB1                                           -------   --------->HSFB2a(2)            --------->ICU4                                             <-------   --------------->AGL15   ---------->DOF2                                                   <-------  ----------------->AGL3 --------->ANAC58                                                    --------  ===================================================================================================  ----------------->AGL2 --------->ANAC46                    <---------AtLEC2               <------ZmHOX2a(1)  ----------------->AGL1 --------->ANAC58<---------ICU4   ------>ZmHOX2a(2)               <---------TOE2(3) -->TOE2(3)  --------->GLK1(2) <---------ARR11(3)        --------->At4g35610       <---------TOE2(3) -->TOE1(3) <---------GLK1(2)  --------->ARR11(3)        <---------At4g35610    <---------ATHB12   aacttccaaaatcagaatctaaaattcacgaaagaacttatgataatttctctacattgatctgcatcgaagaaaatcacaaatcaaggatttaggattc  5590600                                                                                               ------                                                                                               <-----                                                                                           --------->ZAT6                                                                                         ============                                                                                         ----------->RAV1(1)                                                                                         ------>NtERF2  <----------DOF2                                                                    --------->ANAC46 <-----------------AGL3                                                              --------->ANAC58 -->GLK1(2)                *TSS                                                      --------->ANAC58 --GLK1(2)          <---------ZAT6                   <------------CBF              --------->CCA1(2) --ARR14(2)         <---------ANAC46      ----------------->AGL1                  --------->ARR14(2) ->ARR14(2)    <---------REM1(1)      --------->At4g35610         <------NtERF2   <---------ARR14(2) ==================MADS_MADS          <---------At4g35610------------>CBF <---------------AtSPL3  <--   tgacctttaactggaagttgtagtgtgagtgaaggcagtgagatgccaaaatagaaattgccaatggccgagaggtgatgttcggatacgccaacagtac  5590700                  <---------YAB1                <--------HAHB4                <---------ICU4               <---------ATHB12                            ----------->GT1         ----------->GT1                                 <---------ATHB12        <------NtERF2                                   ------>MYB46(1)        --------->ALFIN1                                ------>MYB83   <---------AHL20(2)      <---------bZIP60(2)                               --------->MYB52(1)--------->GLK1(2)      <---------ANAC58                             <-----------GT1    <---------AHL20(1)      <---------ANAC46                         --------->TOE2(3)      <---------AHL20(2)      <---------ANAC58  --------->LBD16        --------->TOE1(3)      --------->AHL20(2) ----------->RAV1(2)  <---------LBD16         ------>ZmHOX2a(2)       --------->AHL20(1)   <---------AHL20(2) --->ZAT14     <---------YAB1                 ----------->GT1     --------->AHL20(2)   <------MYB83 ----ZAT14   --------->YAB1                 --------->ARR11(3)    <---------AHL20(2)   ----------->GT1 ============RAV--------->YAB1              <---------ARR11(3)   --------->AHL20(2)    <------MYB46(1) ---------HVH21--------->ICU4<---------AHL20(2)<-------GAMYB <---------MYB52(1)  <---------AHL20(2)   tgtccctggcgtggataatcattatccggttttaattcaattcatagatcgttaaaccaatcggttaataaataaaattctatttgatttggtttaattt  5590800                                                                 -------->P                                                                 ------>MYB46(1)                <----------DOF2   <---------MYB52(1)             ------>MYB83        <---------ANAC58             <-----------GT1    <---------ANAC58               <---------MYB111(1)   <---------ANAC58            <-----------GT1     <---------ANAC58         --------->TOE1(3)    ------->TEIL       --------->LBD16   ------>MYB83             --------->ANAC58      <---------ALFIN1     <---------LBD16     ------>MYB46(1)          --------->ANAC58    ------>ZmHOX2a(1)  --------->ZAT6   --------->ARR14(2)   ----------->RAV1(1)      ------->TEIL  <---------MYB46(2)   --------->ZAT2   <---------ARR14(2) --------->MYB46(3)   <----------DOF2<-----------HVH21 --------->ZAT14 <---------DEAR3(2) <-----------GT1   ---------->ID1     --------->TOE2(3)--------->ANAC46   cttcggttccggttttatcttttcaccaacattttcgtttgtcatctttcgcacctaaaccttcacctactcctccactgaaccctagcttacactcact  5590900                                                                            <---------------------WRI1                          <------------CBF                                 --------->ANAC58                       ------>NtERF2             --------->ARR14(2)        --------->ANAC58                      --------->ANAC58           <---------ARR14(2)      ---------->DOF2                      --------->ANAC58        >>>>>>>GRF7           <---------At4g35610                      --------->ANAC46     <-----------HVH21        --------->ZAT2                   --------->DEAR3(1)    <---------ARR11(3)         <---------ZAT2         --------->ARR14(2)                  <------NtERF2          --------->ARR11(3)  <---------GLK1(2)             <---------ARR14(2)           <------------CBF <-----------RAV1(1) <------ZmHOX2a(1)   --------->At4g35610   --------->YAB1   gttcatttctctctattggcatcgacgccattgttggactgaagatgtcaggattcgaagatggattttcagctgaaaagctattctcacaaggatactc  5591000                                                           --------->ANAC58                                                           --------->ANAC58                                                     --------->RAP2.3(1)                                                     --------->ATERF1(1)                                                     <------NtERF2   <-------MYC3                                                    ------>NtERF2    ------->MYC3                                        <---------DAG2--------->DEAR3(1)     --------->ZAT2                              --------->ANAC46      <---------RAP2.3(1)      --------->At4g35610     --------->SPL7         <---------ALFIN1       --------->bZIP60(1) <-----------HVH21     ------>MYB83         --------->AtMYB61     ----------->TGA1    --------->ANAC58              <--     ------>MYB46(1)      <---------ALFIN1      ----------->HVH21   --------->O2         <---------ALFIN1   --------->TOE2(2)     --------->ANAC46     <---------At4g35610   --------->ANAC46  --------->PCF2   --------->TOE1(2)   <-----------GT1  <----------DOF2------>NtERF2--------->ANAC58 <---------PCF2   atacacctacgacgatgtgatatttctaccacacttcatcgacttttccactgacgccgtctcgctatccacgcgtctcagcaagcgcgtcccactctcg  5591100  Previous    Next  AGI:  At1g16340.1    Description:  ATKDSA2/ATKSDA; 3-deoxy-8-phosphooctulonate synthase. similar to AtkdsA1 (Arabidopsis thaliana KDO-8-phosphate synthase A1), 3-deoxy-8-phosphooctulonate synthase [Arabidopsis thaliana] (TAIR:AT1G79500.4); similar to AtkdsA1 (Arabidopsis thaliana KDO-8-phosphate synthase A1), 3-deoxy-8-phosphooctulonate synthase [Arabidopsis thaliana] (TAIR:AT1G79500.3); similar to AtkdsA1 (Arabidopsis thaliana KDO-8-phosphate synthase A1), 3-deoxy-8-phosphooctulonate synthase [Arabidopsis thaliana] (TAIR:AT1G79500.2); similar to unknown [Populus trichocarpa] (GB:ABK93946.1); contains InterPro domain DAHP synthetase I/KDSA; (InterPro:IPR006218); contains Inter Range:  from: 5587887    to: 5590627    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g16350.1    Description:  inosine-5'-monophosphate dehydrogenase, putative. Identical to Probable inosine-5'-monophosphate dehydrogenase [Arabidopsis Thaliana] (GB:Q9SA34); similar to inosine-5'-monophosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G79470.1); similar to inosine-5'-monophosphate dehydrogenase [Camellia sinensis] (GB:ABU94684.1); similar to inosine monophosphate dehydrogenase [Glycine max] (GB:CAB38030.1); similar to inosine monophosphate dehydrogenase [Vigna unguiculata] (GB:AAO40253.1); contains InterPro domain IMP dehydrogenase / GMP reductase, conserved site (InterPro:IPR015875); contains InterPro domain IMP dehydrogenase/GMP reductase; (Inte Range:  from: 5590945    to: 5593001    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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