Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ------>NtERF2          --------->RAP2.3(3)          --------->DEAR3(1)          <---------ALFIN1        <---------ATERF1(1)        <---------RAP2.3(1)        ------>NtERF2       --------->ANAC46    ---------->CDC5  <---------ARR14(2)  --------->ARR14(2) --------->At4g35610 <------NtERF2   <---------GLK1(1)     --------------->AGL15 <---------RAP2.6(3)        --------->ARR14(2)          --------->ANAC58 <---------At4g35610<---------ANAC58   <---------------AGL15                                   <----- -------->RAP2.6(2) <---------ANAC58  <-----------------AGL2                                   <----- --------DEAR3(1)--------->GLK1(1)    <-----------------AGL3                                --------- ------SPL7----------->RAV1(1)        <-----------------AGL1                                <-------- ->ZmHOX2a(2)   <---------GLK1(2)   --------->GLK1(2)   --------->ANAC58                <---------ANAC58 ---------------->TaNAC69(2)<---------ARR14(2)    --------->MYB46(3) --------->YAB1     <---------ANAC58   ggccgctctgcgccaccagatttcttggcgaaactgacattcttgatatggaaccatcacgaacaaattaagcatattgacacagtaagggcttacactt  5580400                                                                                                    -                                                                                                    -     --------->ZAT6   <---------ZAT18                                                            <--- <-----------HVH21    --------->ZAT18                                                    --------->DAG2 ----DAG2            --------->ALFIN1                                                   ---------->DOF2 -----DOF2 <----------DOF2               <------ZmHOX2a(1)                            <------ZmHOX2a(1) -------->AGL1 <---------HSFB2a(2)    --------->At4g35610                            --------->LBD16< ---------AGL1 --------->HSFB2a(2)    <---------At4g35610                          <---------LBD16  <   ttgggtcacactactttgtggaagtggacattgttttgccagaggacatgagactacaagaggctcacaacatcggagagactcttcaggaaaagctcga  5580500    --------->At4g35610                          --------->YAB1                                     - -------->At4g35610                         --------->ZAT14                                        <- -------->ZAT2                              <---------ZAT18                 <---------ARR11(3)     -- ------At4g35610           <---------ZAT18  --------->ZAT18           <-----------GT1         ------- ---------At4g35610        --------->ETT(2) <---------ZAT14        ----------->GT1   ----------->GT1< ---------ZAT2       <----------DOF2 <----------DOF2     ------>ZmHOX2a(1)  <---------GLK1(2) <------   gcagctcgctgaagtagaacgagcttttgtccacatagactttgagttcactcatcgtcctgaacacaagtgtaactagattttaagtagtaatttgtag  5580600            <----------DOF2      <---------ICU4   --------->YAB1   <--------HAHB4                  <---------ANAC46  <---------YAB1                   <---------ANAC58                   <---------RAP2.6(3)           < -------------->AGL15              <---------ANAC58                   ------>NtERF2                 < ----------------AGL3             ---------->ID1                     <---------ANAC58               < --------------->AGL3         <---------ANAC58                       <---------ANAC46          <----- -------->AtSPL8              <---------ANAC58                     <---------ZAT18             <----- ---------------AGL15   ------->TEIL                        ------->TEIL                       <----- ---------AtSPL8       <-----------GT1              <---------GLK1(2)<---------ANAC58      <---------   tactataattagttctttagtttatgtactcttcgtgtcgtttttgtctatatagatacttgaacgttgtgccgtctctgtttatcgaatgcgcattgtg  5580700                                                                                    ------->TEIL                                                                               --------->YAB1                                                                          --------->AHL20(2)                                                                          <---------AHL20(2) ---------ANAC58                                                          <---------AHL20(1) ---------ANAC58             <---------ANAC58                             --------->AHL20(1) ---------ANAC46        --------->YAB1    <---------ZAT14              --------->YAB1 ----ANAC58       <---------DDF1          --------->ZAT14       --------->YAB1 <---------ICU4 ----ANAC46      --------->ETT(2)       --------->ANAC46   --------->AHL20(2) --------->ICU4      --- ----ANAC58      <---------ETT(2)     --------->ZAT6   ----------->GT1<---------AHL20(2)--------->AHL20(2) -DOF2  <---------At4g35610  <---------ANAC58        ---------->DOF2 --------->AHL20(2) <---------AHL20(2)   tgtcgtttgaagctaatcgtcgacattaatagcgtttcaaacactaaactcaaaataaagataaaatcatatataataaaataatgaattttaaatgaaa  5580800                                                 *TSS                                             <------------CBF                                            --------->ATHB12                                      --------->LBD16                                     <---------ANAC58                                         -------                                     <---------ANAC58                                     ------>NtERF2                                     <---------ANAC55(1)                                 --------->ANAC58         ----------->GT1             <---------ANAC55(2)                                 --------->ANAC46   --------->YAB1                    --------->ANAC55(2)                                 --------->ANAC58 --------->ANAC58         <---------ETT(1)<----------DOF2    --------->ANAC58       <-----------ARR10 --------->ANAC58<<<<<<<<<GATA-1     <---------ANAC46        --------->ANAC58       --------->GLK1(2) ------>MYB46(3)<-----------GT1     --------------->AtSPL8 --------->ANAC46        <---------GLK1(2)-   accactcaaaatggtttttatctatcttccgacaaaattccgtgcttcattgctcttctccacaagacaacatttctctggctcagaatcgacgccatgg  5580900                                              <----------DOF2                                             <---------ANAC58                                             <---------ANAC58               --------->WOX13(1)                                   --------->ZAT2                         <---------MYB52(1)                                   --------->At4g35610                   <-----------HVH21                                   <---------ZAT2                        --------->LBD16                                   <---------At4g35610              --------->At4g35610   ---------->DOF2            --------->ARR14(2)                  --------->YAB1            --------- -->AtLEC2    ---------->DOF2 <---------ARR14(2)      <----------DOF2   --------->ANAC46    --------- ---------->GT1       --------->ZAT2 --------->RAP2.6(2)       --------->WOX13(1)         <---------LBD16   aaatgtaaagaagaaacaaagacgagctctcaaatccagcagcaatggcttttcttctttctaatctatcatctccgtcaatccatcttcaaaccggaaa  5581000                                                                 --------->HSFB2a(2)                                                                 <---------HSFB2a(2)                                                            ------->TEIL           <---------ALFIN1          ---------->DOF2                            <---------At4g35610          --------->ZAT14    <---------ALFIN1                                 --------->At4g35610  <-----------ARR10 >LBD16--------->TOE1(3)  --------->WOX13(1)        --------->MYB52(2)    --------->GLK1(2) -->GT1--------->TOE2(3)--------->WRKY18(1)       <---------MYB52(1)     <---------GLK1(2)-----------   atacccaaaccttaaacccattttcagtcaatctctatcgtcttcgtcttctgttagctacgaatttgtagaagagaatctatctacactctctctattg  5581100                                                                        ----------->RAV1(1)                                                                       --------->bZIP60(2)                                                                       --------->ANAC58                                                            --------->YAB1                         --------->ANAC55(2)              --------->ANAC58                         <---------ANAC55(2)         --------->ANAC58  --------->ANAC46                         --------->ANAC46            --------->ANAC58  --------->ANAC58                         --------->ANAC58        --------->ANAC58   --------->MYB46(3)                         --------->ANAC58        --------->ANAC58 <---------ICU4                         --------->ANAC55(1)    <---------ZAT18--------->YAB1                  ---------->DOF2      --------->ANAC58   --------->ANAC58              ------>ZmHOX2a(1)        --------->ANAC46 --------->CCA1(2)                       ----- ---->AGL15------>ZmHOX2a(1)           --------->ANAC58<---------ARR11(3)                    --------   agcatccagtctcctcctcttaaagacacgcaagttcagacaagacacagttcgcaagataagcataataaccacgacagagatgaattctatatcaatc  5581200                           --------->ARR11(1)                           ----------------------->TaNAC69(2)                           --------->ARR11(3)               <---------ALFIN1              --------->SPL7--------->CCA1(2)              --------->ZAT14                                --------->ANAC46              <---------ZAT14                           <---------ICU4                             <-              <---------ZAT18                        ------>ZmHOX2a(2)                             --        ------------------>SPL14                    <------ZmHOX2a(2)             <---------------AGL15     <---------At4g35610   <---------ARR14(2)      --------->ARR11(3)             --------------->AGL15   <------NtERF2           --------->ARR14(2)      --------->AGP1                <-----------------AGL2 <-----------RAV1(1)     ----------->ARR10--------->ZAT14  <-----------GT1       <-----------------AGL1 <---------REM1(1)  <---------ANAC46      <---------ZAT14  <---------ICU4        <-----------------AG ---->YAB1--------------->AtSPL3  <----------DOF2  <---------ARR11(3)            ==================== ->WOX13(1) <---------SPL7 <---------ARR11(3)     <---------GLK1(1)     ----------->GT1           <--   ttggtgtcgctgtccgtacacttcgtgaagatttgcctttgctcttcactagagatcttaattacgacatctacaggtaaatttctcgtttgggtatttg  5581300  Previous    Next  AGI:  At1g16310.1    Description:  cation efflux family protein. similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT1G79520.1); similar to cation diffusion facilitator 9 [Stylosanthes hamata] (GB:AAO38708.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 5578425    to: 5580687    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g16320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79510.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64929.1); contains domain NTF2-like (SSF54427) Range:  from: 5580849    to: 5582137    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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