Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                              <------                                     <---------DAG2                                           -------  --------->ALFIN1        <----------ID1                                                     <------- ------->DAG2             --------->ZAT18     <---------ATHB12                               <------- ------->DOF2   --------->DAG2       <----------DOF2                                       <--------- --ZmHOX2a(1)  ---------->DOF2   --------->DAG2             <----------DOF2               <---------AHL20(2) -----ID1     ---------->DOF2   ---------->DOF2 --------->TOE1(2) ------>ZmHOX2a(2)       --------->AHL20(2)   aaaagtgtgagttaacaaaaggcagaaggggacaaaaagctttatgcaatcgtgggaaaccactttgatctaaaaaactgtggacgtagtatttaatcat  5578000                                  --------->ZAT6                                <---------ARR11(3)    --------->YAB1              --------->ARR11(3)   <---------YAB1              <---------RVE1(1)  <<<<<<<<<<GATA-4             --------->RVE1(1)  <<<<<<<<<<GATA-3             <---------GLK1(1)  <<<<<<<<<<GATA-1             <---------CCA1(1)  <<<<<<<<<<GATA-2             --------->GLK1(1) ----->ZmHOX2a(1)             --------->ARR11(3) ------->TOE2(3)              <---------ARR11(3) --------ANAC58           ---------->DOF2 --------ANAC58         --------->AHL20(2)  <---------ANAC58 ---ICU4                <---------AHL20(2)  <---------ANAC58 -->YAB1                --------->YAB1      <---------O2                     ---------->DOF2 --YAB1              --------->YAB1         <---------bZIP60(2)           <---------TOE2(3) --ATHB12            ----------->GT1      --------->MYB52(1)           <---------REM1(1)  ---------->DOF2 --GT1          ----------->GT1--------->CCA1(1)               <----------DOF2        ----------->GT1   tccttatcataatccaaaatgtataataaaaagatatctctacttaacgtggccatatagaaaaccttttaagatgaaggaaagagtaatgtaaaagaat  5578100                                                                                 --------->ANAC46                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                              <---------WRKY12                                                                            <-----------HVH21                                                 --------->ZAT6        ------>MYB46(1)                                        <---------DAG2                 ------>MYB83                                        <----------DOF2              <---------MYB111(1)                                       <---------ANAC58              <---------MYB46(2)           <--                                       <---------ANAC58              <---------MYB111(2)     <-------             <-------TEIL  <---------AHL20(2) <---------AtLEC2    <---------ALFIN1    --------->MYB46(3)   tggtaatggtatacatacatactcgtgattttatgaccatggctttttgcatcactagtgagtaatgcccacctacttcgtcaactcaacaacttatgaa  5578200          <---------AHL20(2) <---------ZAT14                                            <-----------GT1         <---------AHL20(1)  --------->ZAT18                               --------->ARR11(3)   -----         <---------AHL20(2)  <---------ZAT18                               --------->AHL20(1)   -----     <---------AHL20(2)   <---------ANAC46                                 <---------AHL20(2)  <----- ---------GT1    <-----------GT1    --------->YAB1                         <---------AHL20(1) <------ --YAB1  --------->AHL20(2)  --------->ZAT14             ---------->DOF2--------->AHL20(2) <---------   taactattcaattttttttttgccgattatgtgcacaattttaaaacagaagacaaatgtaaagtatatgactataaaatattgactaaataactttccg  5578300                                          <---------HSFB2a(2)                                          --------->HSFB2a(2)                                         --------->REM1(2)                                      <---------ANAC58 ---->LBD16                           <---------ANAC58                                     --------->ARR11(3) ->NtERF2                       <----------DOF2                                            <--------- ----LBD16                   ---------->ID1   ---------->DOF2                        ----------->GT1 ---LBD16           <XXXXXXXXXXXXXXXXXXXXMIR866-5P   --------->ICU4                 --------->DAG2 -DOF2             <---------TOE2(3)  <---------ANAC46          <-----------GT1    ---------->DOF2   gcgattttgttagtaaatgttaagaaaatttgttctttttccttgtagaaaaggaatgattctaaattactatcccaaaaaaaaaaaaagtaataacttg  5578400                         *TSS                        <----------TaMYB80                       ---------->TaMYB80                       <---------ARR14(2)                       --------->ARR14(2)                    <---------ANAC46          <-----------GT1                         <---------LBD16           <---------ANAC58   ------>NtERF2   <---------AHL20(2)                 <---------DAG2    --           <---------ANAC58   <---------At4g35610      <----------DOF2           <----------DOF2  ---           <---------ANAC46   --------->At4g35610<----------DOF2        --------->HSFB2a(2)       --- --GT1  <XXXXXXXXXXXXXXXXXXXXMIR403     ------>ZmHOX2a(1)               <---------HSFB2a(2)--------->GLK1(1)   tttcgaagagtttgtgtgtgagtcgtatatgccgcttaactcctatattttctttctctttctcacaacttcccctagaaacacttttttcggaattcga  5578500                                                                                            ------>NtERF2                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.3(1)                                                                                          --------->DEAR4(2)                                                                                         ------>NtERF2                                                                                         <---------RAP2.3(1)                                                                                         <---------ATERF1(1)                                                                                         --------->ABI4(1)                                                                                        --------->RRTF1(3)                                                                                        --------->RRTF1(2)                                                                                        --------->RAP2.3(2)                                                                                        --------->RAP2.3(3)                                                                                        --------->ATERF1(2)                                                                                        <---------ATERF1(2)                                                                                        <---------DEAR3(1)                                                                                        --------->DEAR3(1)                                                                                        <---------ALFIN1                                                                                       --------->ORA47(2)                                                                                       --------->RAP2.6(1)                                                                                       --------->ATERF1(1)                                                                                       <------NtERF2                      <---------DEAR3(1)                                               --------->RRTF1(1)                     --------->ATERF1(1)                                               --------->ERF1                     <------NtERF2                                                     --------->DEAR4(2)                    ------>NtERF2            <---------At4g35610                       --------->DEAR3(2)         ------>ZmHOX2a(2)                   --------->At4g35610                       --------->RAP2.3(1)        <------ZmHOX2a(2)                  <---------------------WRI1                 <---------ATERF1(1) ------->ZAT18     <---------DEAR3(1)  --------->SPL7                     ----------->HVH21--------->DEAR3(1) ------>ANAC58     --------->ETT(2)  <---------SPL7                       ----------->TGA1<------NtERF2 ------>ANAC58<---------ICU4       <---------------AtSPL3       <----------DOF2       <---------RAP2.3(1)   acgcacagcgatcggataatggcgacggagcatataactcgtacgggagatgaatacaatgtcgagcttttacctagtgacgacgatgcgccgccgcttg  5578600                                                          --------->TGA1a                                                          <---------O2                                                          --------->O2                                                          <---------TGA1a                                                          ===========================bZIP_DOF                                                       <------NtERF2                                                       ----------->HVH21                                                      <-----------HVH21                                                      <---------RAP2.6(3)                                                     --------->ANAC46                               -                                 ------->GAMYB       --------->RAP2.6(2)  <----------DOF2         ---                                 ===================================MYC_MYB                       ---                               <---------At4g35610 <------NtERF2--------------->AtSPL3      ---------                 --------->TOE2(3)               --------->ALFIN1         <---------DAG2 <---------ANAC58          <------NtERF2        --------->At4g35610------>NtERF2 ------->TEIL             <---------ANAC58        <---------ANAC46 <----------DOF2        <---------MYB52(1)<---------SPL7        -------------        <---------ANAC58 ===========================================bZIP_DOF            -------------        <---------ANAC58 <---------DAG2    <---------ALFIN1   <---------SPL7   ---------->ID1     ---   aatcgtcttggcgtctcaacctcgacgcttttcaactcccttcttccaccggtggccgtcacgacggacgtactcgcttttctcgctattttcgtactcc  5578700                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                      --------->ANAC58                                                                      ----------->GT1                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(2)                                                                     ------->TEIL                                                                  --------->ALFIN1     --------->AHL20(2)                                          <---------------AtSPL3     <---------AHL20(2)                                         <---------ANAC46    <---------AHL20(2)                                          <---------ANAC58    --------->AHL20(2)                                          <---------ANAC55(1)    <---------AHL20(1)                           --------->DAG2 <---------ANAC55(2)   --------->ICU4                               ---------->DOF2 <---------TGA1a -------->AHL20(2)                              ==========================bZIP_DOF             ------ ------>ANAC58                                 <---------MYB52(1)<---------------AtSPL8      <------- ------>ANAC58                                --------->LBD16   <---------O2        --------->DEAR3(1) >SPL7  <---------AHL20(2)                   --------->ANAC55(2)--------->O2  --------->YAB1 <------- -->AtSPL8                                   <---------ANAC55(2)--------->TGA1a    <---------At4g35610 -->AtSPL3                         --------->At4g35610          <---------ANAC58   --------->At4g35610 ------>ANAC46 <<<<<<<<<TBF1    <---------At4g35610     <---------AtLEC2     --------->ICU4  <-------   aagtaatttttttattcttcttcatgtttttgttatctgctctcaatccgtaaagtgtgcatagagacgtgtacgtaaaatgatcagcgaccatgacttg  5578800                                                                                       <---------AHL20(2)        --------->CCA1(2)                                                              --------->AHL20(1)       <---------ARR14(2)                                                              <---------AHL20(1)       --------->ARR14(2)                                                              --------->AHL20(2)    <---------ANAC46                                                                  <---------AHL20(2) ----->GT1                                                                <---------AHL20(2) --ANAC58         --------->YAB1             ----------->GT1             --------->AHL20(2) --ANAC58      <----------DOF2           --------->DAG2                  <---------AHL20(2) --ANAC46    ------->TEIL               ---------->DOF2         <---------MYB46(3)    --------->AHL20(2)   tgaattgtggatatgaactttgatcatgtgtatgaaaaaaaaaaaagtagttatacaaatgtgtagttgttgaaatttttttgggaaaataaatttagaa  5578900  Previous    Next  AGI:  At1g16310.1    Description:  cation efflux family protein. similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT1G79520.1); similar to cation diffusion facilitator 9 [Stylosanthes hamata] (GB:AAO38708.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 5578425    to: 5580687    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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