Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ANAC46                             --------->ICU4                        --------->ANAC58                                                     --------                        --------->ANAC58                                                     <-------                    <---------HSFC1(2)                                                       --------                    <---------DEAR3(2)                                                      =========                    <---------HSFB2a(1)                    --------->WOX13(1)               ------->GAMYB                    <---------MYB46(3)                    <---------AHL20(2)              <---------ZAT2                    --------->HSFC1(2)                    --------->AHL20(2)              <---------At4g35610                    --------->HSFB2a(1)                  --------->AHL20(2)               --------->At4g35610             <---------ARR14(2)    <---------LBD16 --------->ANAC58                  --------->ANAC58      <-------TEIL <---------DEAR3(1)              --------->ANAC58                  --------->ANAC58     --------->CCA1(2) --------->SPL7            ---------->DOF2             <-----------HVH21 -->GLK1(1)  --------->ARR14(2)  ----------->HVH21--------->DAG2        --------->ZAT18  --------->MYB52(1)   tcaagagatacagagaattcgacggttcgccatttttgacgggagagccaaaaaagcaaattaatcacacagaggggactgtgagacgagccaactgcag  5573900                                    --------->MYB52(1)                                    --------->ARR14(2)                                    <---------ARR14(2)                            --------->O2  <---------ZAT2                            ----------->RAV1(2)                            --------->ZAT2--------->ZAT2                            <---------At4g35610           <---------DEAR3(1)                            --------->At4g35610        --------->bZIP60(2)       <---------GLK1(2)    <---------ZAT2<---------At4g35610                         ---------------     --------->ANAC58       ================================MYC_MYB                 --------->ANAC58     --------->ANAC58       <---------TGA1a            --------->O2            <---------ZAT14 ->ZAT14                    --------->TGA1a--------->ATERF1(1)                 --------->ZAT14 --ZAT14--------->GLK1(2)   <---------O2  --------->At4g35610              --------->ZAT6 ->At4g35610               ------>NtERF2 <---------ARR14(2) <------NtERF2<-----------GT1 --------->ICU4 =====================================MYC_MYB    ---------->CDC5   <---------TOE2(3)--------->ANAC58   aaacagcacgattctttcgaagaaaatgccacctggcatatcggagctggctcagcctcgtcgtcgtttaagttttaacagtacagaagccatttttaga  5574000                       <-----------HVH21                     -------->ABF1                                                          ---------                     <-------MYC3                                                         <---------TOE1(3)                     ------->MYC4                                                        <---------DOF5.7(2)                     <-------MYC4                                                       <---------WRKY12                     ------->MYC3                                                     --------->TOE2(3)                    <---------ANAC55(2)                                              --------->ANAC58                    <---------O2                                                     --------->ANAC55(2)                    --------->TGA1a                                                  <---------ANAC55(2)                    --------->ANAC55(2)                                              --------->ANAC58                    <---------TGA1a                                                  --------->ANAC46                    --------->O2                                                    <-------TEIL                    <--------ABF1                     <---------ANAC46             --------->ARR14(1)       ----------->RAV1(2)                            <---------ANAC58             --------->CCA1(2)       <---------ZAT2<-------MYC2                     --------->O2                --------->ARR14(2)       --------->ZAT2------->MYC2                     <---------O2                <---------ARR14(2)       --------->At4g35610                            <---------ANAC58            --------->ARR11(1)       <---------At4g35610                   <---------AHL20(1)               ---------->DOF2     <-----------RAV1(2)                     --------->AHL20(2)           ----------->RAV1(1)<------- -->AGL3       ----------->HVH21             <---------AHL20(2)          <----------ID1--------->DOF5.7(2)   gggagagccagctggacttgacacgtgtcaaactaaatcaggcccattttattttcgcgtggcaaaactcaataaacaacaaaagatacgtcaacgttat  5574100                                                         --------------------->WRI1                                                       <------NtERF2                                                    ------->MYC3                                                    <---------LBD16                                                 <---------ALFIN1                                                <-------TEIL                                                <---------REM1(2)                                                --------->ZAT14                                              <---------MYB52(1)                                             --------->LBD16                        <---------ICU4     <---------LBD16                                    ------>ZmHOX2a(2)                        --------->ATHB12   ==================================HOX2a_HOX2a     <------ZmHOX2a(2)                       <---------ATHB12    ------>ZmHOX2a(2)                                ---------                     ------>MYB83         ===================================HOX2a_HOX2a    <--------                     ------>MYB46(1)      <------ZmHOX2a(2)                                 <--------                   <---------MYB111(1)   --------->ARR14(2)              --------->LBD16   <---------CCA1(2)             --------->PCF2              <---------ARR14(2)  ---------->ID1     --------->TOE2(3)          ---------->DOF2              --------->DEAR3(1)<----------DOF2<---------ANAC46<---------MYB52(1)  <---------ICU4   --------->AtMYB61 ------>NtERF2  <-------MYC3      ==============================HOX2a_HOX2a >TOE2(3)---------->DOF2--------->YAB1<------NtERF2<---------O2       ------>ZmHOX2a(1) ------------- --MYB52(1) <-----------TCP11(1) ----------->HVH21 --------->ANAC46   ===============================HOX2a_HOX2a   tcaaatatgaccaaaggcccaccaaatcatgggccttgacgccgatccggtacacgcggctttgtagttttcctccgtgaaatctcaacccttagatctc  5574200                          --------->ANAC58                          --------->ANAC58                        ------>NtERF2                        <---------ATERF1(1)                       <---------DEAR3(1)                               <-----------GT1                       ----------->HVH21                       --------->ANAC58                      <------NtERF2--------->ZAT14             --------->ANAC58    --------->DAG2    ------>NtERF2<---------ZAT14         --------->YAB1   ---------->DOF2    --------->ATERF1(1)                --------->GLK1(2) >ARR11(3)           --------->RAP2.6(2)                --------->ARR14(2)                 ---------- -ARR11(3)           <---------ATERF1(1)                <---------GLK1(2)               <------------CBF -AGP1       <---------YAB1   --------->At4g35610<----------DOF2 --------->YAB1      ------------>CBF -------->WRI1      <---------DEAR3(1)    --------->YAB1<---------ARR14(2)        <------------CBF   atcgcaaaagtagttacgatgggccgcgacgcatcagaacacagtcatcgtctttgcagaatcgtaagcatattttacatgagaaattgcaattgcaatt  5574300                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                            <------NtERF2                                                                                            ---------                                                                                           <---------RAP2.3(1)                                                                                           <---------ERF1                                                                                           ------>NtERF2                                                                                          <---------RAP2.3(3)                                                                                          <---------ANAC46                                                                                          <---------RAP2.6(2)                                                                                          <---------RAP2.3(2)                                                                                          <---------DREB2C(2)                                                          --------->ANAC58                <---------RRTF1(3)                                                        ---------->DOF2                   <---------RRTF1(2)                                                    --------->ANAC58             <------ZmHOX2a(1)<--                                                 --------->ZAT14   <---------LBD16        --------->ATERF1(2)                           ------->TEIL      --------->AGP1        --------->At4g35610    <---------ATERF1(2)                <-----------GT1   <---------ANAC46  --------->ANAC46             ====================     ---------->ID1     <---------MYB52(2) --------->LBD16--------->ANAC58       ====================    *TSS    --------->AHL20(2)    <---------ANAC58  --------->ANAC58         <--------P   <---------DEAR3(1) -->CBF     <---------AHL20(2)    <---------ANAC58<---------ALFIN1 <---------At4g35610   <---------LBD16   tgcatttgtctcatttttttactcaaacgaacattttcgtggctccagagctacactcaaaagccattcagcggaaggggttaggatttttggcggcgag  5574400                                                                     <---------ARR14(2)                                                                    <---------ZAT2                                                       <---------ALFIN1                                                      <------NtERF2 --------->ZAT2                                                     <---------RAP2.6(3)                                                     ------>NtERF2  <---------At4g35610                                                    --------->ANAC46--------->At4g35610                                                    <---------ATERF1(2)                                                    --------->RAP2.3(3)                                                    --------->RAP2.3(2)                                                    --------->RAP2.6(2)                                                    --------->ATERF1(2)                                                    --------->DEAR3(1)    --------->O2                                                   --------->RAP2.3(1)   ------>ZmHOX2a(1)                                                ------>ZmHOX2a(2) <------NtERF2                                               <------ZmHOX2a(2) ------>NtERF2                                               --------->CCA1(2) --------->LBD16             <--------P                       --------->ARR11(3) <------NtERF2          --------->HSFB2a(2)                 <-----------ARR10  <---------At4g35610          <---------HSFB2a(2)                 <---------AGP1   --------->RAP2.3(1)         <---------ANAC46                     --------->AGP1   --------->RRTF1(1) ---->ZmHOX2a(2)                              <---------ARR14(2)--------->DEAR3(1) ------>GLK1(1)                               <---------ARR11(3)--------->RAP2.3(2) -------GLK1(1)                <---------ARR11(3) --------->At4g35610--------->ARR14(2) ------ARR11(3)                <-----------ARR10================================HOX2a_HOX2a ----->ARR11(3) <---------ANAC58              --------->ARR14(2)--------->RRTF1(2)  <---------DAG2 ------ARR14(3)--------->At4g35610           <---------CCA1(2)------>NtERF2    <---------ANAC58    -- >ATERF1(1) <---------MYB52(1)<---------CCA1(2)=================================HOX2a_HOX2a  -------- ----ZmHOX2a(2)<---------At4g35610          ----------->ARR10 --------->LBD16  <---------ANAC58   --- ====HOX2a_HOX2a<---------ANAC58          =============HOX2a_HOX2a<---------ALFIN1  <----------DOF2-- =====HOX2a_HOX2a           <---------DAG2------>ZmHOX2a(1)  --------->ANAC46--------->REM1(2)<------   atctctctgtttctggtagcttagcaatggccttatcttctctcctcagatctgccgccacttccgccgcagctcctcgtgtcgagctttatccatcgtc  5574500              <---------TOE1(2)              <---------TOE2(2)       <---------ICU4       -------->ATHB1                                                        <---------ANAC58      <---------ATHB12                                                       <---------ANAC58  --------->SPL7                                                          <---------ZAT18 ------->TOE2(1)              <---------ANAC58              <---------AHL20(2)            <--------P ->YAB1--------->YAB1         <---------ANAC58             --------->AHL20(2)<---------ANAC46 ------------>AtSPL8   <---------TOE2(3)     <---------ANAC58           --------->At4g35610  -------- ------->TOE1(1)      <-----------GT1        <---------ANAC58           <---------At4g35610  <------- -----TGA1   <-----------RAV1(2)             <---------ANAC46   <---------AHL20(1)     <---------AtMYB61   atcgtacaatcattctcaggtattaaacgttttcgtttctcactcttgcgtttgtgttccatttaatatgttttagctcgcttggagttttggtagatac  5574600       <------ZmHOX2a(1)                                <---------WRKY12 ->ARR14(2)              <---------TOE1(2)         ---------->DOF2 --ARR14(2)            <----------DOF2          <---------ZAT6   tagatagtaggaggtgatgttttgtctttggttctggtttcaatttctcagtgtaaagtcaacttggtgtttctatagtatcgctatcttctctacttga  5574700                                                                      --------->ATHB12                                                           ----------->RAV1(2)                                                           ==============================RAV                                       <---------ANAC58    --------->At4g35610                                       <---------ANAC58    <---------At4g35610<------NtERF2                                  <---------MYB52(1)      --------->GLK1(2)  ----------->RAV1(1)                            ------>ZmHOX2a(1)  --------->MYB52(1)     --------->YAB1<---------TOE2(3) ------>ZmHOX2a(1)     <---------GLK1(1)      <---------ZAT14        <---------YAB1---------->DOF2   gtcctcacatgtagttgaaatattgaattcctagtcgtttggcctgagttaactgatgagcatctgaatcgatgataggcagcattaaagtttcagtgag  5574800  Previous    Next  AGI:  At1g16300.1    Description:  GAPCP-2; glyceraldehyde-3-phosphate dehydrogenase. similar to GAPCP-1, glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G79530.1); similar to unknown [Populus trichocarpa] (GB:ABK95756.1); contains InterPro domain Glyceraldehyde-3-phosphate dehydrogenase, type I; (InterPro:IPR006424); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Glyceraldehyde 3-phosphate dehydrogenase; (InterPro:IPR000173) Range:  from: 5574304    to: 5577616    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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