Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->LBD16                                                      ===============              --------->SPL7                                                          <------ZmHOX2a(1)              ------->TEIL                                                      <------ZmHOX2a(1)           <----------DOF2                                                --------->ZAT14<------MYB46(1)        <-----------GT1        <----------DOF2                            <---------ZAT14<------MYB83    <----------DOF2           <---------ANAC58                           ------>ZmHOX2a(1)  <-------TEIL -------DOF2<---------SPL7    <---------ANAC58                         <---------ANAC58  ----------->GT1 ----------------->WRI1<---------YAB1    <----------DOF2               <---------ANAC58 <------------ --GLK1(2)--------------->AtSPL8    <-----------HVH21          <---------CCA1(2)=====================   tttggtctttttgctgtaccgcataatgagaggctttcggtcactttcaagctcagcaattgcacatatcatttcctgcagaggaataggaaggtgcaaa  5573100           --------->DAG2          ---------->DOF2       --------->YAB1                                                                        --------      <------ZmHOX2a(2)                                                                      --------     <---------ARR11(3)                                                                      <-------     --------->ARR11(3)                       --------->At4g35610                           <-------- ============HOX2a_HOX2a            --------->TOE2(3)                                     <---------MYB59 -----------TaNAC69(2)              --------->TOE1(3)   ------>MYB46(1)                 --------->MYB52(1) ============HOX2a_HOX2a            <---------MYB59     ------>MYB83            <---------ATHB12   acttcaagatcataaaggggcatagataatttcaataacctaaacagtagctaaaaccaagctcaaaactactagttttctaatgaagcataccgaatcc  5573200                        <-------GAMYB                   --------->LBD16       --------->YAB1  ----------->GT1                                                      --------- ->ARR14(2)        ----------->HVH21                          ------>ZmHOX2a(2)             <-------- ->GLK1(2)        --------->HSFB2a(2)                       --------->ARR11(3)          ---------->DOF2 --ARR14(2)      <---------LBD16                            <---------ARR11(3)  ---------->DOF2 -ARR14(1)      ------>NtERF2                            <--------P<---------ATHB12 ---------->DOF2   aagatggaatcaaaatgcctccggacagttatatcagaaacagcctgaaaatgtaaggggttgatctcaataagtagaggcagaaagaaagaaaggtcta  5573300                                                                                            <------ZmHOX2a(2)                                                                                           <---------ARR14(2)         --------->ANAC46                                                                  --------->ARR14(2)   <---------GLK1(1)         --------->ATHB12                               --------->DAG2<------ZmHOX2a(1)   --------->GLK1(1)        --------->ICU4                                  <---------TOE2(3)------>ZmHOX2a(2) >ARR11(3)                  <---------HSFB2a(1)                           --------->CCA1(2)<---------ARR11(3) -ARR11(3)   --------->WOX13(1)          <---------YAB1          <---------ANAC46      --------->YAB1   actagaaatccacatcaatcttgtattggaatgtttgaaatttcttatagattaccctcatctcggtctgtgtaagataaggctgaccatcaggatccct  5573400                                                              <-------TEIL                                                              ------>ZmHOX2a(2)                                                              ==============================HOX2a_HOX2a                                                            <---------ARR14(2)                                                            <---------ARR11(3)                                                            --------->ARR14(2)                  <----------DOF2                          <------ZmHOX2a(1)           ===============================RAV --------->ZAT14===============================HOX2a_HOX2a           ----------->RAV1(2)                <---------ZAT14<------ZmHOX2a(2)        --------->HSFC1(2)          --------->WOX13(1)   <---------TOE1(2)           ------>ZmHOX2a(1)        <---------HSFC1(2)       --------->TOE2(3)--------->WRKY12                   ----------->RAV1(2)        --------->HSFB2a(1)   ----------->RAV1(1) ----------->HVH21              --------->ARR14(2)       ------->TEIL<---------MYB52(1)         <---------At4g35610--------->AtLEC2<---------ARR14(2) <   tgagaggtgaaccttctggcctttagtctctccaacatcaatccattcagcactgaccgcaggatccatccacatttcttctaaatcctctggctcaaca  5573500           ----------->GT1                                                  --------->ANAC58      <---------HSFC1(1)                                                    --------->ANAC58      --------->HSFB2a(2)                                                 --------->MYB52(1)      <---------HSFB2a(2)                                   --------->ARR11(3)     ----------------->AGL1                      <----------DOF2         --------->TOE1(2) <------------ATHB5                             --------->AtMYB61 --------->YAB1 <---------ICU4                    <------------CBF      --------->YAB1 --------->MYB46(3) -------->ATHB1                   <---------AtLEC2    <------------CBF  <---------MYB52(2) --------->YAB1      <---------MYB52(1)         <---------DAG2 --------->WOX13(1) ---------ATHB12   <-----------RAV1(1)      --------->ANAC46<---------ARR11(3)           <------ZmHOX2a(1)   caatcattccagaacgtgaaactgttggccattcttgcattgctatacgacctttccattgatatctatcagaaacaaacgaaaaacaagaggaaacaga  5573600                                --------->ANAC46                                --------->ANAC58                                --------->ANAC55(2)                           <-------TEIL                   <---------DOF5.7(2)                 --------->DOF5.7(2)                                            ------>MYB46(1)                --------->TOE1(3)                                ----------->GT1------>MYB83                --------->TOE2(3)                         ----------->GT1       --------->MYB52(1)    --------------------->WRI1  --------->ANAC58     ---------->DOF2        --------->AGP1    <------   agcttatttagaacacatcgttaacaacatccataagtaacatgtttgccaaatgtaaagaagaaaatcgaaatatcagacctagccgaaggcttaagcg  5573700                                                     --------->LBD16                                                 --------->ARR14(2)                                             <------NtERF2                                          <---------LBD16                         --------->AHL20(2)                                    <---------HSFB2a(1)                           <---------AHL20(2)                                    --------->HSFB2a(1)                          --------->AHL20(2)                              <------ZmHOX2a(1)  <---------ARR14(2)         <-------TEIL  --------->LBD16                           --------->At4g35610   --------->GLK1(2)         --------->CCA1(2)  ------- ---LBD16               --------->At4g35610<---------DEAR3(1)           <---------YAB1  <---------LBD16   ggaaggaagagaatatcgacgagagaagcagaggaagaaggtttctcggcgaatccagagagaagaagatgatgaagattcaaattaatctctgggaaat  5573800                                    <---------ANAC46                             --------->ICU4                        --------->ANAC58                                                     --------                        --------->ANAC58                                                     --------                    <---------MYB46(3)                                                       <-------                    <---------DEAR3(2)                                                      =========                    <---------HSFB2a(1)                    --------->WOX13(1)               ------->GAMYB                    --------->HSFC1(2)                    <---------AHL20(2)              <---------At4g35610                    <---------HSFC1(2)                    --------->AHL20(2)              <---------ZAT2                    --------->HSFB2a(1)                  --------->AHL20(2)               --------->At4g35610             <---------ARR14(2)    <---------LBD16 --------->ANAC58                  --------->ANAC58      <-------TEIL <---------DEAR3(1)              --------->ANAC58                  --------->ANAC58     --------->CCA1(2) --------->SPL7            ---------->DOF2             <-----------HVH21 -->GLK1(1)  --------->ARR14(2)  ----------->HVH21--------->DAG2        --------->ZAT18  --------->MYB52(1)   tcaagagatacagagaattcgacggttcgccatttttgacgggagagccaaaaaagcaaattaatcacacagaggggactgtgagacgagccaactgcag  5573900                                    --------->MYB52(1)                                    <---------ARR14(2)                                    --------->ARR14(2)                            --------->O2  <---------At4g35610                            ================================MYC_MYB                            <---------TGA1a                            --------->TGA1a--------->ATERF1(1)                            ----------->RAV1(2)       <---------GLK1(2)    <---------O2  <---------ZAT2                              ---------------     --------->ANAC58       --------->ZAT2--------->ZAT2  <---------DEAR3(1)        --------->ANAC58     --------->ANAC58       --------->At4g35610        --------->O2            --------->ZAT14 ->At4g35610                <---------At4g35610        --------->bZIP60(2)     <---------ZAT14 ->ZAT14                    <---------ZAT2--------->At4g35610              --------->ZAT6 --ZAT14--------->GLK1(2)  ------>NtERF2 <---------ARR14(2) <------NtERF2<-----------GT1 --------->ICU4 =====================================MYC_MYB    ---------->CDC5   <---------TOE2(3)--------->ANAC58   aaacagcacgattctttcgaagaaaatgccacctggcatatcggagctggctcagcctcgtcgtcgtttaagttttaacagtacagaagccatttttaga  5574000  Previous    Next  AGI:  At1g16290.1    Description:  similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ78585.1); similar to Os02g0170900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046030.1); contains InterPro domain Lytic transglycosylase-like, catalytic (InterPro:IPR008258) Range:  from: 5570747    to: 5573532    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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