Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ARR11(3)                                               <---------ARR11(3)                                              --------->GLK1(1)                                         ----------->GT1                         --------->AHL20(2)    <---------AHL20(2)              <------MYB83                                 <---------AHL20(2) --------DOF2                       <------MYB46(1)                           --------->TOE2(3) ---GLK1(2)                        --------->MYB59                --------->HSFB2a(1)           <---- -YAB1             <---------At4g35610  <---------AtMYB61        <---------TOE1(3)              <----   ctttatttttttggtgtctgaagctaattttagcgatttggtatggtgaaatctttcaaatcgagcgaaggttttgtttttcttaaattacttctattga  5563500                                         <---------------AGL15                                         --------------->AGL15                                        ----------------->AGL2                                        <-----------------AGL1                        <-------GAMYB   <-----------------AG                       --------->MYB111(2)     <---------HSFB2a(2)                       <---------MYB46(3)<<<<<<<<<<<<<AGL25                   <---------TOE2(3)    ----------------->AG                   <---------TOE1(3)    ----------------->AGL1           <---------WOX13(1)           ----------------->AGL3         --------->ATHB12               <-----------------AGL3        --------->AHL20(2)              <-----------------AGL2                                 ------        <---------AHL20(2)<---------REM1(1)    --------->HSFB2a(2)                    --------->KAN4(1) -----TOE1(3)  <----------DOF2        <-----------GT1   --------->DAG2               <---------KAN4(2) -----TOE2(3)--------->ATHB12    ---------->DOF2       ---------->DOF2           --------->ETT(1) <--   ggtttttggattaattgatttaaggttgttgtagagaaagtttccatttttggaacaaaaagcatgtttttggagttttctggtcggattattcatctac  5563600                                                                                        ------------>CBF                                                  <---------HSFB2a(2)           --------->ATHB51                                                  --------->HSFB2a(2)           <---------ICU4                                                 <---------LBD16                <---------AHL20(2)                                       <---------WOX13(1)                       --------->AHL20(2)             --------->ARR11(3)       <------------CBF  --------->ARR14(2)     --------->ICU4 ------>CBF  <---------ARR11(3)     --------->AHL20(2)  <---------ARR14(2)  --------->AHL20(2) ----------CBF  <----------DOF2     <---------AHL20(2) <------ZmHOX2a(1)  --------->TOE2(3)<---------   aattgcaaatgggaagaactttgatgagtagtctgtgtttaattgatagtttctggaggattcaacttctgccaaaacttaattatttctcccaattgtt  5563700                         ----------->GT1                        ----------->GT1                          <----------DOF2                      --------->ALFIN1              ------------>CBF <---------TOE1(3)              <---------AHL20(2)                   --------->ANAC58  <---------TOE2(3)         <-----       <---------At4g35610                         --------->ANAC58 ---------->DOF2            ------ ---CBF--------->At4g35610              ------------>CBF         --------->TOE2(3)     <----------DOF2   tttttttgcagcttaaatatttgggaggggaaatttgtagcctacaatctctgaagcaatttggcatctttaaagttttagcagtgattctttatagttc  5563800                      <---------ANAC58        --------->GLK1(2)       --------->ARR14(2)            --------->ATHB51       <---------GLK1(2)             <---------AHL20(2)       <---------ARR14(2)    <-------GAMYB      <---------At4g35610<-----------HVH21          <---------MYB46(3)                          -----  <-----------HVH21   <---------ANAC58            <-------GAMYB                  <---------WOX13(1)<- ----ZAT14          --------->ARR11(3)        <------ZmHOX2a(1)                  <---------ANAC46  -- --->ZAT14     <-----------GT1    --------->YAB1 <-----------RAV1(1)          <---------YAB1   ------   agtatgtcagattcttgttacaggtcttgtcagttagaataatttgaaggactgttgttgttgttgttgttgttgttgttgtgatggatagaaacagacc  5563900           --------->ANAC58           --------->ANAC58           --------->ANAC46                                      --------->ANAC46          --------->HSFB2a(2)                     --------->PCF2 --------->ANAC58          <---------HSFB2a(2)                    <-----------HVH21 ----------->RAV1(2)  --------->ARR14(2)                     <---------WOX13(1)      --------->ANAC58 ---->AtMYB61                     <---------GLK1(1)            <-----------GT1 --------ALFIN1                   --------->CCA1(2)          <---------GLK1(1) ------->AtMYB61                 <---------ARR14(2)      --------->ANAC58            --------->HSFB2a(2) --->MYB46(3) ----------->RAV1(1)--------->ARR14(2)      --------->ANAC58  --------->MYB52(1)    <---   accacatccgttccagcaacatgctatggaacctggatatgtgaatgactctgtcccacaaggatttacgcctgatcaaacgggtctctcgaatgcaaat  5564000                                                                         --------->ARR14(2)                                                                         --------->GLK1(2)                                                            <---------HSFC1(2)         <-----------HVH21                                                            --------->HSFB2a(1)     ------>ZmHOX2a(2)                                                            --------->HSFC1(2)<---------ANAC46           ------>ZmHOX2a(1)                                <---------HSFB2a(1) ----------->HVH21      ------>MYB83         <------NtERF2                 ==================================HOX2a_HOX2a      ------>MYB46(1)     --------->LBD16                <------ZmHOX2a(1)    <---------ANAC58    <---------MYB59     <---------LBD16             <------ZmHOX2a(1)    <---------ARR14(2) --------HVH21 <---------At4g35610         --------->AtLEC2<---------KAN4(2)  <---------ANAC58   ----   gtccgacctaatcctgcagatgttaagccggggcttcattactccatacaaacaggagaggaattttctcttgagtttctgcgtgatcgtgtcatttctc  5564100                                   --------->YAB1                                --------->WOX13(1)                                         <------ZmHOX2a(1)                    <---------At4g35610                                                 --------->HSFB2a(2)                    --------->ZAT2 <---------ICU4         --------->ANAC58         <---------HSFC1(2)         --------->ARR14(2) --------->GLK1(1)             --------->ANAC46         --------->HSFC1(2)         <---------ARR14(2)<---------ARR11(3)             --------->ANAC58      <---------At4g35610        <---------GLK1(1)  --------->ARR11(3)        ------->GAMYB            <-----------RAV1(2)<--- --------->ARR11(3) --------->At4g35610     ----------->GT1               <------MYB83  <---------HSFB2a(2) <---------ARR11(3) ----------->RAV1(2)   <-----------RAV1(2)             <------MYB46(1)--------->LBD16 ------>DOF2        <---------ZAT2<---------ATHB12--------->MYB52(1)     --------->MYB59<---------LBD16   aaaggtctgcaaatcccattgcagctggagatatcaattatcccacaggttataacgggcacgcagggtctgaatttggttcagatgtttccaggatgag  5564200                                                                                      <-----------RAV1(2)                                                                                    ----------->RAV1(1)                                                                                  --------->At4g35610                                                                         <---------ARR14(2)                                               <-----------------AGL1    --------->ARR14(2)                                             <-------TEIL               <---------GLK1(1)         <--               <-----------RAV1(2)        --------->LBD16               --------->GLK1(1)     <------              --------->At4g35610        --------->LBD16                <---------CCA1(2)  <---------HSFC1(2)            <---------bZIP60(1) --------->MYB46(3)                     ---------->TaMYB80  --------->HSFC1(2)  <---------ANAC46      <---------YAB1  --------->LBD16           <---------LBD16 <---------At4g35610 ------AtLEC2 <---------At4g35610       <---------LBD16----------->GT1 <---------KAN4(2) <---------GLK1(2)   catggtgggaaatggcatcaggcagtatgagagaacaaaccccccggttcacgagtttggaaataaactcgggcatatccattcagcaccagaagcttca  5564300                                 --------->GLK1(1)                                 --------->CCA1(2)                                 <---------GLK1(1)                                <---------ARR14(2)                                --------->ARR14(2)                      <---------HSFC1(2)                              <---------TOE2(3)                      --------->HSFC1(2)                         ------->GAMYB    ------>ZmHOX2a(1)                      --------->HSFB2a(1)                     <-----------GT1     <----------DOF2----                      <---------HSFB2a(1)                ----------->GT1   <---------DOF5.7(2) <-----     <---------YAB1<------ZmHOX2a(1)                    <--------P  ---------->DOF2         <-------- -------ICU4     <---------TOE2(3)    ------->TEIL     <---------MYB52(1)  ---------->DOF2<----------DOF2 -TEIL  --------->CCA1(2)  <---------AtLEC2         <-----------RAV1(2)----------->GT1---------->ID1   ttatgtcaagatagaagtttaggaaatttccatggatatgcatcttcttcagcctcaggtagtttaacagcaaaggttaaagtcctttgtagctttggtg  5564400  Previous    Next  AGI:  At1g16270.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G79570.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G35050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64916.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65102.1); similar to hypothetical protein OsJ_023097 [Oryza sativa (japonica cultivar-group)] (GB:EAZ39614.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245); contain Range:  from: 5563884    to: 5568362    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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