Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ARR11(3)                                                              <---------ICU4                                                              --------->YAB1           ----------->GT1                                   <---------YAB1   -------->HAHB4                                            --------->ICU4   <--------ATHB1           <---------------AtSPL8         --------->YAB1   --------->ATHB51      <---------YAB1                    <---------ICU4   --------->ATHB12      <---------AHL20(2)               --------->ICU4   <---------ICU4       --------->AHL20(1)                <---------YAB1  --------->AHL20(2)    <---------AHL20(1)              --------->YAB1                              <  <---------YAB1        --------->AHL20(2)             --------->ICU4                            <---  <---------ATHB51      <---------AHL20(2)           --------->YAB1 --------->ARR11(3)          <----  --------->ICU4       --------->YAB1               <---------AHL20(2)                       <-------  <---------AHL20(2)<---------AHL20(2)   ----------->GT1<---------ICU4     <----------DOF2   -------- <---------AHL20(1)--------->AHL20(2)--------->AHL20(2)<---------YAB1 ------>ZmHOX2a(2)     <-------- -------->YAB1 --------->ICU4 <----------ID1       --------->AHL20(2)<------ZmHOX2a(2)  --------->AHL20(2)   taaaataattggaaggaaatattaaatataatggaacaaaaaaatgtaaactatataataataataataagatcgttctttagcattacattatatatct  5508100                                                                                                <----                                                                                               <-----                                                                                               <-----      ----------->HVH21                                                                        <-----      <---------ETT(1)                                                                         ------     --------->DEAR3(2)                                                                        <-----  --------->DEAR3(1)                                                                          <------ --------->ANAC58                               <---------ZAT2                                <------ --------->ANAC58                               --------->At4g35610                        <---------LBD16 --------->ANAC46                               <---------At4g35610  <----------DOF2       --------->At4g35610 ---------At5g28300                            ------->TEIL      <---------MYB59           <---------At4g35610 --------HVH21                              <---------YAB1      <---------ANAC58         ---------->CDC5 ------DOF2       ----------->GT1        --------->ICU4         <---------ANAC58         <-----------RAV1(2) --ARR11(3)   --------->DAG2             <---------ATHB51   <---------ANAC58   <---------GLK1(2)===== ->ARR11(3)  ---------->DOF2      ----------->GT1           <---------ANAC58   --------->ARR11(3)---- -CCA1(2) --------->AtMYB61      --------->ALFIN1         <---------YAB1       <---------ARR11(3)====   ttcacggcccgaccaaaaagtagataaaccaagaagtggagaaattatgaagctccgattttgcttgcctactttctccaagatttttggctcagcggat  5508200         <-------MYC3 --ZmHOX2a(2)                                             <---------AHL20(1) ----AGP1------->MYC3                                     --------->AHL20(1) ------ARR10                                              --------->ARR11(3) ----ARR11(3)                                             <---------ARR11(3) --->ARR14(2)                                     ---------->DOF2 ----ARR14(2)                                   <---------AHL20(2) ---CCA1(2)<-----------HVH21                    --------->AHL20(2) ---ARR14(1)                       --------->AHL20(2)  <---------------AGL15  ----------->GT1 ==========================HOX2a_HOX2a     --------->ANAC58              --------->AHL20(2) -->ZmHOX2a(2)      ------>ZmHOX2a(1)      --------->ANAC58              --------->AHL20(1) ==========================HOX2a_HOX2a     --------->ANAC46              <---------AHL20(2)   ctaaacttccacatgtcaattcctcatttgttctgaattaaaaacacgaattaaaagctatatattgaaaacaaataaaatggctaaatcgcttaatatc  5508300                                                                                                  ---                                  --------->AHL20(2)                                        ---------                                  <---------AHL20(2)                               --------->ARR11(3)                              <---------YAB1                                      --------->GLK1(1)                             --------->AHL20(2)                                   <---------GLK1(1)                             <---------AHL20(2)                      <-----------------------TaNAC69(2)                            --------->YAB1                          --------->ZAT18<---------ARR11(3)                        <------ZmHOX2a(1) --------->GLK1(1)  ---------->DOF2---------->DOF2 ---------                 <---------YAB1--------->YAB1       <---------HSFB2a(2)<---------SPL7     ---------->DOF2   aggtctaaatggtttgattacgattaggaattttaataaatgagaaatctaattacagaagtacaaagagggccgtagcaaaggaaatcttttaaagcaa  5508400                                     <---------YAB1                                    --------->AHL20(2)           ----------->GT1          <---------AHL20(1)                     ------>ZmHOX2a(1)       ---------->DOF2              --------->AHL20(1)                    --------->TOE2(3)    --------->YAB1                 --------->YAB1              <----------DOF2    --------->AHL20(2)      ----------->GT1                  <---------------AGL15 --------->WOX13(1)        --------->ANAC58      --------->ANAC46         --------------->AGL15 ------>YAB1      --------->AHL20(2)<---------AHL20(2)<---------ATHB12 <-----------GT1 >ANAC58  ----------->GT1  --------->ANAC58--------->AHL20(2)--------------->AGL15 >ANAC58 --------->DAG2  --------->MYB52(1)<---------AHL20(2)=============================MADS_MADS   tagcaattaaaaaggctaaaaaaaataaaacggaaaattataattttaaatactcaaccatttctctttatagtttccttataaaacaaaaacaaaaacc  5508500                                                                             <---------LBD16                                                                       <---------HSFB2a(1)                                                                       --------->HSFB2a(1)        ---                                                                       --------->HSFC1(2)         ---                                                                  <------NtERF2                   ===                                                                 ------>NtERF2  <---------MYB52(1)---                                      <<<<<<<<<TBF1      <-------TEIL  <---------HSFC1(2)         ---                                <<<<<<<<<TBF1     --------------------->WRI1 <-----------------AGL1                    ---------->ID1 <<<<<<<<<TBF1 <----------DOF2--------->DEAR3(1)                --- *TSS         <---------YAB1 <<<<<<<<<TBF1  ------>ZmHOX2a(1)--------->DEAR3(1)--------->LBD16    ---   attccatcaatttctcatccttgttgttttcttcttcttcttcttcctcttcttttatgttcatcgccgtcgaagtttctccggtaatggaagacatcac  5508600                                                                                                 ----                                                                                                 ----                                                                                         --------->ANAC58                                                                                         ------>ZmHOX2a(2)                                                                                         --------->ANAC58                                                                                        <------ZmHOX2a(2)                                                 --------->At4g35610                   <---------ARR14(2)                                            --------->WOX13(1)     ---------->DOF2   --------->DEAR3(1)   <------NtERF2                        --------->YAB1           ------>ZmHOX2a(1)------->GAMYB  <--- ------>O2                             --------->ICU4            ==============================HOX2a_HOX2a ------>ANAC55(1)                  <---------------------WRI1    ===============================HOX2a_HOX2a ==========================MYC_MYB--------->LBD16<---------At4g35610              --------->ANAC46 ------>ANAC58                   --------->TOE2(2)              --------->TOE2(3)--------->MYB46(3) ------>TGA1a                    --------->TOE1(2)   --------->REM1(1)      --------->ANAC58   ------ ------>ANAC58     <-------GAMYB--------->DEAR3(2) ----------->RAV1(1)      --------->ANAC58  ------- ------>ANAC46    <---------MYB46(3)<---------DEAR3(1)--------->TOE2(3)     --------->ANAC46 --------   acggcagagcaaaaaaacttcggttgagaatgaaaccggcgatgatcagtcagcaacatcagtagtccttaaagctaaacgcaaacgccgatcgcaacca  5508700                                                                                 <---------MYB52(1)                                     ----------->HVH21                    <-----------TGA1                   --------->ZAT2    <------NtERF2                        <-----------HVH21                   <---------ZAT2   <-----------HVH21                    --------->ANAC58  --------->ANAC58 <---------At4g35610                                   --------->ANAC46  --------->ANAC58 --------->At4g35610                                   --------->ANAC58 ----->O2--------->ANAC58          --------->bZIP60(1)                   --------->bZIP60(2) ----->ANAC46     ------->TEIL     <---------bZIP60(1)            --------->ANAC58 ------O2--------->ANAC46          <---------ANAC58               --------->ANAC46               ---- ->GAMYB --------->ANAC58          <---------ANAC58   <----------ID1    <-----------STF1     <------- -->MYB46(3) --------->MYB52(1)   <-----------------------TaNAC69(2)--------->YAB1        <---------- >P    <---------ALFIN1--------->DEAR3(1)  ----------->GT1        --------->ANAC58       <---------CCA1(2)   cgagacgctccaccccaacgtagctccgtccatagaggcgtcacaaggttaacatgagaacaaaacacactcaaaacgtcaccgtttttgtttatcttta  5508800                                            <-------TEIL                                          --------->TOE1(2)                                          <---------SPL7               --------------->AGL15     <---------HSFB2a(1)              <-----------------AGL2     --------->HSFB2a(1)              ----------------->AGL3     <------MYB83   --------->YAB1                        <------MYB46(1)<-----------RAV1(1)                 --------- ----->ANAC55(2)  <---------YAB1         --------->HSFC1(2)                   --------->ANAC58      < ---DOF2   <----------DOF2               <---------HSFC1(2)                   --------->ANAC58------- -GT1   <-----------GT1    <------NtERF2<---------------AtSPL8     --------->YAB1           ---------   cttaatcatataactttccgattataggcatcgatggactggaaggtacgaagcacatttgtgggataagaatagttggaacgaaactcagaccaagaaa  5508900                                        <----------DOF2        ---------->ID1                --------                                     --------->ARR11(3)  <---------ARR11(3)                 <--------       <-----------HVH21             <---------ARR11(3)  --------->ARR11(3)                 --------- >ANAC58                     <---------ARR11(3)          --------->AHL20(1)          --------->GLK1(1) ----------ID1               --------->ARR11(3)       <---------TOE2(3)  ------>ZmHOX2a(2) <---------LBD16 --->DOF2                   <---------CCA1(2)      <---------YAB1      <---------ARR11(3)  <---------ANAC46 >ANAC58             <-------TEIL   <---------CCA1(2)---------->DOF2   --------->ARR11(3) <---------LBD16   ggaagacaaggtcagtctatacatacacacatatctatatatctttatgagttattaaagatattgtcgttttgatcttcaactccgatttctccgggga  5509000  Previous    Next  AGI:  At1g16060.1    Description:  ovule development protein, putative. Identical to AP2-like ethylene-responsive transcription factor At1g16060 [Arabidopsis Thaliana] (GB:Q94AN4;GB:Q3EDB4;GB:Q9S9M9); similar to ovule development protein, putative [Arabidopsis thaliana] (TAIR:AT1G79700.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66605.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 5508501    to: 5511729    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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