Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     ----------->GT1 ------>LBD16                                <------ZmHOX2a(1)                                    --- -----LBD16                          ----------------->AGL1                               --------->At5g28300 --->MYB52(1)                       --------->MYB52(1)                                ------>NtERF2 -->DOF2                    <----------ID1 --------->MYB59               --------->ZAT6  ----------->GT1 ->DOF2                  ---------->DOF2 <---------MYB52(1)     ---------->ID1    --------->ANAC46---   cggaagagaaaaattgaaaacataggctaaagaacaaataccagttaggaaaccaaggctgatttcgtcgttctaactctatccacgacgactgtaacaa  5497300                                                                                                 ----                                                                                                 ----                           --------->AHL20(2)                                                   -----                       <---------YAB1                                    --------->ANAC58       -----                    --------->GLK1(2)                                  ---------->DOF2       --------                   <---------ARR14(2)                         <---------MYB52(2)             --------                   <---------GLK1(2)                        --------->MYB52(1)               --------                   --------->ARR14(2)                       ------>MYB83 --------->ANAC58    ------->GAMYB ------>AHL20(2)  --------->At4g35610                       ------>MYB46(1)         --------->AGP1 ------->DOF2   --------->YAB1                      --------->YAB1 ----------->RAV1(1)   <---------MYB52(2)   taaaacgatgaactagaatcagattccgattaaaaattcgaaaattttcgaaaatcagaaccaaacgaacaacaaaagccataccagagctacaaacgcc  5497400               --------->ANAC58               --------->ANAC46               <---------O2               --------->O2              <---------LBD16           ------>MYB83          --------->ANAC58       ------>MYB46(1)       -------->P       ------>MYB83      =====================HOX2a_HOX2a      ------>ZmHOX2a(1)  <---------ARR11(3)  --------->ARR11(3)  ---------->DOF2 ----->LBD16--------->MYB46(3) ----->At5g28300    <------ZmHOX2a(2)                       --------->YAB1     --------->YAB1 ---->RAP2.6(2)--------->ANAC58   <---------GLK1(2)------->TEIL        <---------SPL7 ------>GT1------>MYB46(1)        <---------ARR14(2)    <------ZmHOX2a(1)--------->SPL7 ->ANAC58 --------->ANAC58        --------->ARR14(2)    ====================HOX2a_HOX2a ->ANAC46 --------->ANAC46 <---------At4g35610  <---------MYB52(2)    <---------DEAR3(2) ->ANAC58--------->MYB46(3)--------->At4g35610--------->MYB52(1)     ------>ZmHOX2a(2)     ----------   gtaatatcctaccagccacgggatcaaagagctgcagatttggaaacaaaacgaaccaggaatcatatcgatcggtacgaagcataaaaacaaaaaagag  5497500                                                                                                   --              <-----------GT1                                                                 <------NtERF2         <---------GLK1(2)                                                                   --------    ------>MYB83                 <------MYB46(1)                                           <---------LBD16    ------>MYB46(1)      --------->ANAC58                                                --------->DAG2    --------->MYB52(1)   --------->ANAC58                                            --------->YAB1<-  <---------MYB59--------->ZAT6  <------MYB83             ------->TEIL              <-------TEIL ---- >DOF2--------->YAB1    <---------LBD16        ----------->GT1         --------->LBD16  ---------->DOF2   aaaacctaacagaattttacctctagcacggagattggtttcatcactcgagttaaactgaatctaatgaaaccgcgatagagagattcataaggcggaa  5497600                                      <---------MYB52(2)                                 --------->ANAC46                                --------->HSFB2a(2)                                <---------HSFB2a(2)                                <---------LBD16                             <----------DOF2                           <---------HSFC1(2)                              <---------ARR14(2)                           --------->HSFB2a(1)                    <---------MYB52(1)                           <---------At4g35610               <---------GLK1(1)       --------->TOE2(3)   <---------HSFB2a(1)         <-----------HVH21   --------->ARR14(2)     ---       --------->TOE1(3)   --------->HSFC1(2)       <---------ANAC58   <-----------------AGL1  ------ --------->GT1             <---------ZAT2           <---------ANAC58   <-----------GT1        ------- ->LBD16                  <-----------ARR10 --------->ANAC46 --------->GLK1(1)               -------- ---------ID1          ------>ZmHOX2a(2) --------->MYB46(3) <---------ARR14(2)               <------- ------>DOF2      <------ZmHOX2a(2)   --------->MYB46(3)    --------->ARR14(2)         >>>>>>>>>TBF1   aaagaaaaaccctaacacagatcgatcggagcttctcggaacaaacaccgaatggctcgtcggatatcgttttttccgatatggctgaagaagaaacaaa  5497700                               <---------DAG2                          ---------->DOF2                      --------->ANAC55(1)                      --------->ANAC58                                 --------->ANAC58                      <---------ANAC55(2)                    <---------ZAT6<------------CBF                      --------->ANAC58                       ----------->GT1                        - ------>TOE1(2)  ------->GAMYB <----------DOF2               <---------ANAC46 --------->ATHB12      - --->MYB52(1)   --------->MYB46(3)                   --------->LBD16   --------->ANAC58           --- -->TOE1(2)     <---------MYB52(2)                 <---------LBD16     --------->ANAC46   --------->LBD16 ->MYB46(3)   *TSS    --------->ANAC46         --------->MYB52(2) <---------ARR14(2)     --------->ANAC46 --MYB52(2)   ----------->RAV1(1)            <---------MYB52(1)   --------->ARR14(2)    <---------LBD16   cgagcgatggagacaacaacaaacacgcaaaagctttttctctattagttagtcgcgcgactagtgtgaatacgagccattgatgggttaaccggaatgc  5497800       ------>MYB83                                                                      <---------MYB52(1)       ------>MYB46(1)                                                                <---------TOE1(3)     ------->GAMYB                                                                    <---------TOE2(3)     --------->DREB2C(2)                                                             <-----------GT1    --------->DEAR3(2)                                                          ------>ZmHOX2a(2)   ------>MYB83                                                                <------ZmHOX2a(2)   ------>MYB46(1)                                     <-----------ARR10       <---------RVE1(1)  --------->ORA47(1)                            <---------AHL20(2)            --------->ARR11(3) ----------->HVH21                           --------->AHL20(2)               <---------AGP1 ------->GAMYB                --------->ZAT6 <---------AHL20(2)               <---------ARR11(3) --------->DEAR3(1)       <---------MYB52(1) <---------AHL20(1)               --------->AGP1        < -------->DEAR3(2)   --------->MYB52(1)      --------->AHL20(1)              <---------CCA1(2)    <-- -------->MYB46(3)   <---------At5g28300    --------->YAB1                  ----------->ARR10    <--- ------>MYB52(1)    <-----------GT1         --------->AHL20(2)    <---------MYB59<----------DOF2 ----   taaccgaccgactatagctaatttaccggttatctctaacttcccattatattatcaaatctaaactacttaactacttagatcttttaacgttgtgtca  5497900                                       <---------At5g28300                                  <---------ICU4                                  <--------ATHB1                                  <--------HAHB4                                  --------->YAB1                                            <-------TEIL                                  --------->ATHB51                                <---------AHL20(2)                                  -------->HAHB4                                  --------->ATHB51                           ----------->GT1                                        --------->AHL20(2)                          <---------TOE1(3)                                       --------->ATHB12                          <---------TOE2(3)                           --------->ATHB12     --------->CCA1(2)                          <---------YAB1 ------->GAMYB                <--------ATHB1       --------->ARR14(1)                    <---------AHL20(2)--------->MYB52(1) <---------ARR11(3)      --------->AHL20(2) <-----------GT1   <---------YAB1<---------ATHB51        --------->ARR11(3)      <---------AHL20(2) --------->ZAT6   <---------AHL20(2)  <-----------GT1  ----------->ARR10<---------WOX13(1)<---------ARR14(2) ---------YAB1  <---------YAB1   --------->ICU4   --------->DAG2     --------->ICU4       <---------GLK1(2) -------ICU4   <---------AHL20(1)<---------YAB1  ---------->DOF2     <---------YAB1       --------->ARR14(2) ------YAB1   --------->ATHB51>>>>>>>>>GT-1----------->GT1    --------->MYB52(1) <---------AHL20(1) ----->ICU4   --------->AHL20(2) --------->AHL20(2)----------->GT1  <---------WOX13(1)    --------->ARR11(1)   ttatcactatctcccattatttttatttatggttaataattaaccgagtaataaagtaagatactaactgaatgattgaacaaattatttgagattcgca  5498000                                                                               <------------CBF                                                                             --------->ARR11(3)          <---------YAB1                          <---------HSFB2a(2)        <---------ARR14(2)      ----------->GT1              --------->MYB52(1)                        --------->ARR14(2)    --------->MYB52(1) <---------GLK1(1)          --------->HSFB2a(2)        <---------ARR11(3) --------->ANAC58      --------->GLK1(1)          --------->HSFC1(1)    <-----------HVH21 --------->ANAC46     <---------ARR14(2)       --------->GLK1(2)  <-----------GT1         --------->AHL20(2) --------->ANAC58     --------->ARR14(2) --------->ALFIN1        <-----------GT1  <-----------GT1   ttcacacaacgtataattcagacggatatgtctgacttaaccggtggagcatctagaaatattcggtttacccgtttcagatattgacccgattatttga  5498100                               --------->ZAT2                               --------->At4g35610                               <---------At4g35610                               <---------ZAT2                            --------->At4g35610                            <---------At4g35610                         <---------MYB52(1)                        <-------GAMYB  <---------ZAT2                       <---------MYB46(3)                  *TSS                       <---------DEAR3(2)      ------>ZmHOX2a(1)            --------->ANAC55(2)                 <---------ANAC46      ----------->RAV1(2) <---------ANAC58 <---------ANAC46                 <---------ANAC58    <---------ALFIN1      <---------ANAC58 <---------ANAC55(2)                 <---------ANAC58   <---------ZAT18     <---------ARR11(3)  ----------->GT1        --------->LBD16--------->MYB55(2)      ==================HOX2a_HOX2a<---------ANAC58      <---------LBD16 <---------ANAC46 <---------At4g35610------>ZmHOX2a(2) <---------ANAC58    --------->ARR14(2)<---------DEAR3(1)<-------PIF5--------->TOE2(3)     <---------ANAC46    <---------ARR14(2)<---------RAP2.6(2)     <---------ALFIN1<-----------HVH21  --------->ICU4  --------->ANAC46   <------NtERF2  <---------ETT(2)<---------ANAC58    <-----------HVH21         <--  ----------->HVH21 ------------>AtMYB77------->PIF5<---------ANAC58   <-----------RAV1(1)        ---   taacccgacccggtttatttcgtggcggttagcagctgtccacctgctcctcttccttgatccttgtcacaaaatgtcgcgtaattcttctactgatttc  5498200  Previous    Next  AGI:  At1g16010.1    Description:  magnesium transporter CorA-like family protein (MRS2-1). similar to magnesium transporter CorA-like family protein (MGT1) (MRS2) [Arabidopsis thaliana] (TAIR:AT1G80900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71705.1); contains InterPro domain Mg2+ transporter protein, CorA-like; (InterPro:IPR002523) Range:  from: 5495367    to: 5497714    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g16020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42386.1); contains domain UNCHARACTERIZED (PTHR13056) Range:  from: 5498159    to: 5501352    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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