Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->YAB1         <---------ATHB12          --------->ANAC58       --------->WOX13(1)    ------>MYB83     <------ZmHOX2a(2)     --------->MYB46(3)    <---------ARR11(3)     <---------MYB59   <------ZmHOX2a(1)       --------->AtMYB61                  --------->ANAC58                   ---- <---------TOE1(2)     --------->ANAC58                       --------->ANAC46                   ---- ---------AtLEC2       --------->ANAC58                      --------->SPL7            --------->ANAC55(2) ------DOF2    --------->ZAT2------>MYB46(1) <------ZmHOX2a(1)--------->ANAC58         <---------ANAC55(2) >ZmHOX2a(2)   --------->At4g35610 --------->ANAC58        <---------SPL7              ----------->GT1 ->ARR11(3)   --------->ANAC58     --------->ANAC46      <---------------AtSPL3       --------->MYB59 --ARR11(3)   --------->ANAC58  --------->TOE1(2)       --------->At4g35610           <--------------   ttgcaggatcaatcacaagctcaccacgaccaaacacacgagaagaaggagctatataagctgtacgaaactgaagagccattctagttaagtaaaaaac  5493400                                                                      --------->ICU4                                                                  --------->LBD16                                                                 <---------HSFB2a(2)                                                                 --------->ANAC55(2)                                                         --------->ZAT2                                             --------->WOX13(1)  --------->HSFB2a(2)                                       --------->ANAC55(2)      <---------LBD16                                       <---------ANAC55(2)  --------->At4g35610 ----->TOE1(3)                         <---------ANAC46  <---------ZAT2    <<<<<<<<<<<<<<<<<LFY ----->TOE2(3)        <-------GAMYB    <---------ANAC58  --------->At4g35610                 <------- ---------TaNAC69(2)<------NtERF2      <---------ANAC58  <---------At4g35610            --------->CCA1(2)   gtcaacaatggttctaagagtcgtcgttgtaacagctagtttcgtatcaatccctatacagctgcttccggaattatcgacaatgggaagatagaagaac  5493500               ----------->GT1                                                   <---------GLK1(2)               <---------At4g35610                                               --------->ARR11(3)               --------->At4g35610      --------->GLK1(2)                        <---------ARR11(3)     ----------->RAV1(1)  --------->ANAC58                                 <------ZmHOX2a(2)   <------ZmHOX2a(2)      --------->ANAC55(1)                      <---------ANAC58              <--- <------ZmHOX2a(1)        --------->ANAC46                         <---------ANAC58 <-----------GT1 ---ID1 ------->GAMYB     --------->ANAC58           <---------HSFB2a(2) <------ZmHOX2a(1)    <------   aaaggatcaacagagacagctaaaatacacgaaatgacgaacaatctgttccatacgagaagtgttttgtcttgaggatcaaagattttcttctctgtta  5493600                                             <---------YAB1                                            <-------GAMYB                                           <---------MYB46(3)                                         <---------MYB52(1)                                --------->CCA1(2)                                     <---------At5g28300                                  --------->ARR11(1)                --------->ARR14(2)  <-----------GT1                                       <---------ARR14(2)          --------->HSFC1(1)      --------->GLK1(1)                                 ----------->HVH21          --------->HSFB2a(2)    <---------ARR14(2)                 <---------AHL20(2)---------->DOF2          <---------HSFB2a(2)    --------->ARR14(2)           ========================HOX2a_HOX2a   <          <---------HSFC1(1)  <------------MYB.PH3(1)         ------>ZmHOX2a(2)------>ZmHOX2a(1)   <-         <---------LBD16    --------->MYB52(1)      <---------ARR11(3)   <-----------GT1  --------->ARR11(3) ------YAB1--------->LBD16  <-----------GT1----------->GT1   <---------At4g35610   --------->LBD16 <- ---MYB52(1)    <---------ARR14(2)<----------DOF2   --------->ARR11(3)  <-----------GT1   --------->ARR14(2)   ttcttaagtcttctggaaaaaccgctcttgtaacggatttaccgatggttattagaccttctgatctgatttttttaactccttccctgaaagatttgga  5493700                             ----------->GT1              <---------ALFIN1             <---------At4g35610 ----------->ARR10                              <---------ARR11(3)           <-----------GT1  <---------TOE2(3)                           <---------TOE1(2)       <----------DOF2      <---------TOE1(3)               <---------ICU4      --------->ARR11(3) ----------DOF2          <----------DOF2      <---------GLK1(2)    <-----------HVH21   ------->TEIL --------ANAC58    <---------TOE1(2)   --------->LBD16     <---------YAB1 <------ZmHOX2a(1)      ---- --------ANAC58   ------>ZmHOX2a(1)   --------->ANAC46   --------->YAB1<-----------RAV1(2)   <-------   tgctttcttcttttcacctcctcggttctttaggttaaatccgaaacagtttctctgcatcatcattccagtcgcaggagaagaacttgaatctatatca  5493800                                                                                       ------->TEIL                                                                                  ------>MYB46(1)                                                                                  --------->MYB52(1)                                   ------>ZmHOX2a(2)                           --------->ANAC55(2)                                  --------->CCA1(2)              <----------DOF2<---------MYB46(2)                                  <------ZmHOX2a(2)             ------>ZmHOX2a(2)--------->MYB55(1)                                 <---------ARR11(3)           <---------ARR11(3)<---------MYB111(1)                                 --------->ARR14(2)     <------------CBF       <---------ANAC55(2)          --------->YAB1         <---------ARR14(2)   --------->ARR11(3)     <-----------GT1         --------->ICU4          <---------AGP1       <---------AHL20(1)   <---------ANAC58 ---------         <---------YAB1          --------->ARR11(3)   --------->AHL20(1)   <---------ANAC58<---------    ----------->GT1              --------->AGP1    >>>>>>>>>>GT-3b  <---------YAB1------>MYB83 ----->At4g35610            --------->YAB1      ----------->GT1<------ZmHOX2a(2)<---------MYB52(2) --ARR11(3)              --------->WOX13(1)   ---------->DOF2 --------->ARR11(3)<---------MYB59 <----   tctaacctgtaattataagttaaatgtcattcatagatctgaagaaaacaaagaaaaatattgcgatcttttgattttcttacctaacgaatttttctct  5493900                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                        ------------>CBF                                                                                      <------ZmHOX2a(2)                                                                                      --------->GLK1(1)                                                   <-------TEIL      ------>MYB83    <---------ARR14(2)   <------NtERF2   <---------------AtSPL8  --------->YAB1            --------->MYB52(1)------>ZmHOX2a(2)   <---------At4g35610                    <---------ATHB12           ------>MYB46(1) --------->ARR11(3) <---------RAP2.6(2)                      <<<<<<<<<ARR1            <---------MYB59   --------->ARR14(2) ->ID1             --------------->AtSPL8 <<<<<<<<<ARR2         <-----------GT1      <---------AGP1 --GT1  --------->ANAC55(2)             --------->WOX13(1) --------->ICU4            <---------ARR11(3) ------DOF2<------------CBF           ------------>CBF--------->AtLEC2          ----------->RAV1(1)   ttggccgcttatgtattgggatttgtacattattctgagaaacaatcataagcttcatgcaaaaattaacctaacaacatcacaacagatctcaattata  5494000                                     --------->MYB46(3)                                       <------                                   ----------->RAV1(1)                                        -------                               ------>ZmHOX2a(2)                                              <------                             <---------ARR14(2)             --------->ICU4                <------ZmHOX2a(1)                             --------->ARR14(2)        ----------->GT1                  <---------TOE1(3)                          <---------TOE1(3)          <---------ANAC46              --------->YAB1                          <---------TOE2(3)        --------->ATHB12           <---------YAB1  ------- ->YAB1            ----------------->AGL3      --------->DAG2         ---------->DOF2   <---------TOE2(3) --AHL20(2)        <-----------------AGL3  <---------ANAC55(2)    --------->ALFIN1 --------->ATHB12 ->AHL20(2)  ---------->DOF2<------ZmHOX2a(1) ---------->DOF2<---------AHL20(2)   --------->ICU4   tgaaataaaaactggaaaagagctaattaaggatcggcaacaaatacttaaagtgatttgtaataaatgtgggaaagtgtatgaatgattaaggaaaatc  5494100                                                                     <---------WOX13(1)                                                                   <--------ATHB1   <----------DOF2                                                 --------->ATHB12  <---------ANAC58                                                <---------YAB1  <---------ANAC58                                                --------->ICU4 ---ARR11(3)                                              <---------ANAC46                    <------ -->ARR11(3)                                           ----------->HVH21                     <-------GAMYB -----ARR10                            ------>ZmHOX2a(1)--------->MYB52(1)          <<<<<<<<<RAP2.2 -->GLK1(2)              --------->ARR11(3)            ----------->TGA1         <----------DOF2    --   tagggcttgaagaaacttgagaatgaagaaattgagggttcctacttagtaccatagatgacggatgaatgattgaatactcctttagattggaccgttg  5494200                <---------YAB1           --------->YAB1                                  <---------ARR14(2)           --------->TOE2(3)                               --------->ARR14(2)          <---------YAB1                     <---------ANAC58      <---------ANAC58     <---------MYB111(1)      <---------At5g28300      <-------GAMYB        <---------MYB59   ----------->GT1      <---------ANAC58     <---------MYB111(2)  <---------ARR14(2)       <------NtERF2     <------MYB46(1)       <---------MYB46(2)<---------ANAC58           ------>NtERF2     <------MYB83--------->YAB1          --------->LBD16  <---------CCA1(2)        <---------YAB1     <---------MYB46(3)    <------------MYB.PH3(2) <-----------GT1  --------->ALFIN1--------->YAB1  ------------>MYB.PH3(2)  <---------MYB52(2)<---------ANAC46     <---------bZIP60(2) ---MYB52(1)  <---------ICU4           <---------LBD16 --------->LBD16 <---------ANAC46 -------->DOF2--------->YAB1    <----------DOF2 --------->ARR14(2)<---------O2----------->GT1   tgaaagttggttaccataatcatacactaactaacttttgatgcggagcgtatttaccgcgtattttgacgaggcgcgaagagttattatagctctcttc  5494300  Previous    Next  AGI:  At1g15990.1    Description:  ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7); calmodulin binding / cyclic nucleotide binding / ion channel. Identical to Putative cyclic nucleotide-gated ion channel 7 (CNGC7) [Arabidopsis Thaliana] (GB:Q9S9N5); similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5), calmodulin binding / cyclic nucleotide binding / potassium channel [Arabidopsis thaliana] (TAIR:AT5G57940.3); similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5), calmodulin binding / cyclic nucleotide binding / potassium channel [Arabidopsis thaliana] (TAIR:AT5G57940.2); similar to ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8), calmodulin binding / cyclic nucleotide binding / i Range:  from: 5491298    to: 5493766    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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