Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------HSFB2a(2)                                          <---------LBD16                                    <------MYB83                              <----------DOF2                                    <------MYB46(1)                          <---------ANAC58      <-                                  <--------P--------->LBD16         <---------MYB46(3)  <---------ANAC46                                <-----------RAV1(1)          <-----------GT1 <---------ANAC58    <---           <---------YAB1   <-----------GT1--------->HSFB2a(2)  <XXXXXXXXXXXXXXXXXXXXXMIR864-3P  ----   caatctgtggattactatttcatcgtgttttcacttgttggtgctcgggaaaattatgcaatttttcgagttgttaatggctttagttcttcgtgtttgc  5460900                                                                            <------NtERF2                                                                           <---------SPL7                                                                          <---------ANAC58                                                                          <---------DEAR3(1)                                                                          <---------ANAC46                <----------DOF2                                           <---------ANAC58                <---------DAG2                                  <---------RVE1(1)         <-----------GT1                                        <---------CCA1(1)     --------->AHL20(2)             <---------ARR11(3)         <---------ARR11(3)   <---------TOE2(3)                --------->ARR11(3)      <------ZmHOX2a(1)                   <---- ---------DOF2------->TEIL        --------->MYB59       --------->TOE1(2)<---------LBD16        ----- ------------AGL15         ----------->GT1           ---------->DOF2   <-----------RAV1(1)      ----- ----------->AGL15     ---------->DOF2     <---------AHL20(2)  --------->ARR11(3)           ------->TEIL   tctttaatgaattacgaactttttccaaagagaaataaggtctattttttttggtgaaagtaggagattttttatggcggagggacaattgacgaacata  5461000                                                          --------->ICU4                                                        ----------->RAV1(1)                                                    <---------ANAC55(2)                                                   <---------LBD16                                                   --------->RAP2.6(3)                                                   <---------At5g28300                                                  <---------ICU4           ----------->GT1  <---------At4g35610                            --------->ICU4<---------At5g28300  --------->MYB52(2) -----ARR14(2)               >>>>>>>>>NAM      <---------ICU4 --------->YAB1     --------->TOE2(3) ---->ARR14(2)          ---------->DOF2        <---------------AtSPL3--------->At4g35610            < ---->MYB52(1)      <------ZmHOX2a(1)       ----------->GT1<---------ICU4  <---------ZAT6           -   tcggagatgatactgaagaagaggaagaaagggatgagcttgaattgagtaattacggcaacaattacagtagcagagtgttacattagttgaaagttga  5461100                                                                                      <---------WRKY12                                   <---------YAB1                                     <---------WRKY38(1)                                  --------->ARR11(3)                                 --------->WRKY18(1)        <---------ZAT18           <---------ARR11(3)   <---------DAG2       --------->ATHB12 ---------ARR11(3)  --------->AHL20(2)                 <----------DOF2    <---------TOE2(3) -------->ARR11(3)  <---------AHL20(2)   <---------ANAC46             --------->TOE2(3)          <---   aagatagttgtgctcttcatatttttttatggtcaatatcattttgtggatagaaaactttatcttatagtttcttaatgtttgatggtcaatgtcattt  5461200                ------->TEIL             --------->ANAC58             --------->ANAC46             --------->ANAC55(2)             --------->ANAC55(1)             <---------ANAC55(2)             ------------>CBF          <---------REM1(2)        <---------ZAT2    <---------AHL20(1)    <---------ARR14(2)             <---------At4g35610                                     <---------ICU4    --------->ARR14(2)             --------->ZAT2    --------->AHL20(1)                    --------->YAB1    <---------ARR11(3)             --------->At4g35610--------->CCA1(2)                   <---------ATHB12    --------->ARR11(3)          ---------->DOF2      --------->ARR11(3)             <-----------GT1 <   <---------GLK1(1)    <---------DAG2------>NtERF2  <---------ARR11(3)        <---------AHL20(2)<---   --------->GLK1(1)    <----------DOF2 <---------ALFIN1                   <----------DOF2----------- ------ANAC46--------->ANAC58<-------GAMYB <----------DOF2  --------->ARR11(3)--------->AHL20(2) <---   tgtggatatctgaacacgcatcttgacttttcgttgaagctgccactttcaataagatattagaacttgcagtctgacttttaaattttctaatcaatat  5461300           *TSS          --------------->AtSPL8         <------------CBF       --------->ANAC58       <---------YAB1    <---------ZAT18                                          <---------ANAC58    --------->ZAT18   <-----------GT1                        <---------ANAC58 ------ZmHOX2a(1)     ---------->ID1                 <-----------RAV1(1) ------LBD16 <-----------GT1                  <---------CCA1(2)            <---------ARR11(3) ->CBF --------->ANAC58  ------>ZmHOX2a(1)   ------>ZmHOX2a(1) ------>ZmHOX2a(1) --------RAV1(2)  <----------DOF2       <---------ZAT18      <---------ANAC46   caggagggcacgattgtactctttttcctcttctccattcagtgctccttatcttgtgttgtttcctgcatcgtcttgatatttgaaagtttgagtaaga  5461400                      --------->ARR11(3)                      --------->AHL20(1)                      <---------ARR11(3)                 <---------At4g35610                     --------->RVE1(1)                 <---------RAP2.6(2)                     --------->CCA1(1)          <---------ANAC58            --------->ZAT6                      <---------ANAC58       ------>ZmHOX2a(2)        --------->REM1(2)                     <---------YAB1     <------MYB46(1)        --------->ZAT14 <---------ANAC58    --------->YAB1       <------MYB83       --------->ALFIN1 <---------ANAC58   <---------ATHB12<----------DOF2   <-----------GT1   tgggaaactgtgtagcactagaaatatcttgtgatcaaacgttgaatcatgcttgtggctgcttatttggtgatcggaattacattctcaagatggaggc  5461500                                                    ------>ZmHOX2a(2)            <---------At4g35610               --------->CCA1(2)            --------->ZAT14          ======================HOX2a_HOX2a            <---------ZAT14          <------ZmHOX2a(1)             <-----------HVH21            --------->At4g35610   <---------HSFB2a(2)  <---------MYB52(1)                        <---        <---------ARR14(2)   --------->ARR11(3)   --------->ARR11(3)          <----------ID1     <---        --------->ARR14(2)   <---------ARR11(3)   <---------ARR11(3)<---------YAB1  <---------TOE2(3)   taatctcgaggctctgcagaatactatgcaagagctcgaggagagaagagatgatctgttaagaagagttgtcatagaagaagacaaaggtttgcaacgg  5461600                                                           --------->At4g35610                   <----------DOF2                         <---------At4g35610                  <---------ANAC58                     <---------ARR11(3)                  <---------ANAC58     <---------MYB46(3)------>ZmHOX2a(2)                <------MYB83      <---------ARR11(3)   --------->ARR11(3)           <---------TOE2(3)      --------->ARR11(3)  --------->YAB1           <---------TOE1(3)  ---------->DOF2  --------->ANAC58 ------ANAC58   <------MYB46(1)<---------TOE2(3)     <---------ATHB12   <---------ATHB12----------->GT1 ------ANAC58 <--------P  ----------->GT1      --------->ANAC58---------->DOF2       ---------->DOF2   cttgctcaagttcaaggttggctttcaagggttaaagatgtttgttctcaagtcaatgatctgctgaaagctaaatcaattcaaactgaaaggttatgtc  5461700                                        --------->ANAC58                --------->ALFIN1                                        --------->ANAC55(2)            ------->MYC4                                        <---------ANAC55(2)            ------->PIF5                                        --------->ANAC46               <-------MYC4                                        --------->ANAC58               ------->MYC2                                       <---------LBD16                 <-------PIF5                                 --------->LBD16                       <-------MYC2                                 <------NtERF2                         ------->MYC3                                --------->ANAC58                       <-------MYC3                                --------->ANAC46                      ==============================bZIP_DOF                                --------->ANAC58                      <---------ANAC55(2)                         --------->ARR14(2)                           <---------TGA1a                         <-----------ARR10                            --------->TGA1a                 <---------ICU4 --------->RAP2.6(2)        --------->DAG2                 <---------GLK1(2)    --------->MYB52(1)  ---------->DOF2     <------ZmHOX2a(1)    --------->ARR11(3)   <---------ARR14(2)               ======================bZIP_DOF    <---------ARR14(2)   --------->ARR11(3)     <---------------AtSPL3<---------O2       ---------->DOF2    --------->ARR14(2)  <---------CCA1(2)       <---------------AtSPL8--------->O2       --------->MYB52(1)   tctgtggatattgttctaagaatttcatatctggccgcaattacggaataaatgtactgaaaaagttgaaacacgtggaaggacttctagctaaaggagt  5461800  Previous    Next  AGI:  At1g15885.1    Description:  unknown protein Range:  from: 5460471    to: 5461275    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g15890.1    Description:  disease resistance protein (CC-NBS-LRR class), putative. Identical to Probable disease resistance protein At1g15890 [Arabidopsis Thaliana] (GB:Q9LMP6); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43730.1); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G43740.2); similar to disease resistance protein (CC-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G51480.1); similar to RFL1 [Arabidopsis lyrata] (GB:AAL65637.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain NB-ARC; (Inter Range:  from: 5461311    to: 5464217    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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